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Made the skin_surface+pdb-example compile with the global PDB-library.

This commit is contained in:
Nico Kruithof 2007-02-22 07:32:42 +00:00
parent c014cfa6d1
commit 1928de7ca2
2 changed files with 5 additions and 16 deletions
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19
Skin_surface_3/examples/Skin_surface_3/include/extract_balls_from_pdb.h
View File

@ -8,19 +8,8 @@
#ifndef EXTRACT_BALLS_FROM_PDB_H
#define EXTRACT_BALLS_FROM_PDB_H
// include the source files, since the generated makefile
// cannot link multiple object files
#include "dsrpdb/lib/pdb_utils.cc"
#include "dsrpdb/lib/Residue.cc"
#include "dsrpdb/lib/Protein.cc"
#include "dsrpdb/lib/Error_logger.cc"
#include "dsrpdb/lib/Protein_pdb.cc"
#include "dsrpdb/lib/Model.cc"
#include "dsrpdb/lib/PDB.cc"
#include "dsrpdb/lib/Residue_data.cc"
#include "dsrpdb/PDB.h"
#include "dsrpdb/geometry.h"
#include <CGAL/PDB/PDB.h>
#include <CGAL/PDB/cgal.h>
#include <fstream>
template <class Traits, class OutputIterator>
@ -34,8 +23,8 @@ void extract_balls_from_pdb(char *filename,
std::cerr << "Error opening input file " << filename << std::endl;
}
dsrpdb::PDB pdb(in, true);
dsrpdb::all_weighted_points(pdb, t, weighted_points);
CGAL::PDB::PDB pdb(in, true);
CGAL::PDB::all_weighted_points(pdb.model(0), t, weighted_points);
}

2
Skin_surface_3/examples/Skin_surface_3/skin_surface_pdb_reader.cpp
View File

@ -33,7 +33,7 @@ int main(int argc, char *argv[]) {
double shrinkfactor = 0.5;
// Retrieve input balls:
extract_balls_from_pdb(filename, K(), std::back_inserter(l));
extract_balls_from_pdb(filename, Traits(), std::back_inserter(l));
// Construct skin surface:
Skin_surface_3 skin_surface(l.begin(), l.end(), shrinkfactor);