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Author SHA1 Message Date
Simon Giraudot b87d1bbc3e Very first version of the hierarchical clustering added (work in 
progress).

It contains somes functions that may be more relevant in some other
package :
* 2 functions to compute the covariance matrix of a 3D point set
* 2 functions to split a point set according to a plane

Also the function of the actual hierachical clustering algorithm.
 2015-10-07 16:00:50 +02:00
Sebastien Loriot 62644a62aa Merge pull request #318 from sgiraudot/CGAL-Solver-package-GF 
Regroup solver interface in Solver_package
 2015-10-07 15:54:48 +02:00
Simon Giraudot 30323c816a Write PLY headers 2015-10-07 15:34:08 +02:00
Simon Giraudot 1e068b0844 Skeleton of write_ply_points.h file 2015-10-07 15:12:19 +02:00
Simon Giraudot 0004aed5bc Bug fix: explicitly ask an integer when reading char/uchar from stream 2015-10-07 15:06:08 +02:00
Simon Giraudot a8bea5e6d9 Handle detailed types (e.g. int16 instead of short) 2015-10-07 14:19:26 +02:00
Simon Giraudot f732c100c3 Fix warnings and use union instead of reinterpret_cast 2015-10-07 14:08:03 +02:00
Simon Giraudot c2e38b72a6 Merge branch 'Point_set_processing_3-IO_ply-GF-old' into Point_set_processing_3-IO_ply-GF 2015-10-07 13:52:06 +02:00
Simon Giraudot fddcb24197 Polyhedron demo ply_to_xyz reader 2015-10-07 13:50:57 +02:00
Simon Giraudot 93c52c605c New test for ply reader 2015-10-07 13:50:41 +02:00
Simon Giraudot 5c12ec1e4e Add new ply test (ascii format) 2015-10-07 12:40:46 +02:00
Simon Giraudot 850f28ed07 Ply reader for point sets 2015-10-07 12:10:29 +02:00
Simon Giraudot 442db8be13 Fix OFF magic number 2015-10-07 10:57:07 +02:00
Simon Giraudot 867a731d48 WIP: processing PLY header 2015-10-06 15:36:35 +02:00
Simon Giraudot 6b4da62cab Update read_test with new ply function 2015-10-06 15:16:16 +02:00
Simon Giraudot ac3dbad721 Skeleton of new read_ply_points.h file 2015-10-06 15:01:50 +02:00
Simon Giraudot ac591cf257 Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-29 13:50:17 +02:00
Simon Giraudot 692a8686ca Fix warning (implicit conversion double to std::size_t) 2015-09-29 13:46:37 +02:00
Sébastien Loriot da650cbd1c Merge branch 'old/CGAL-Solver-packages-GF' into CGAL-Solver-package-GF 2015-09-26 15:47:54 +02:00
Simon Giraudot 13e4a76cd8 Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-24 12:45:58 +02:00
Simon Giraudot 36723443a4 Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-09-23 10:29:14 +02:00
Sébastien Loriot cdfc7f1c31 Merge branch 'old/CGAL-split_packages-GF' into CGAL-split_packages-GF 2015-09-23 10:08:41 +02:00
Sébastien Loriot b970fc80ef Merge branch 'old/Surface_reconstruction_points_3-Change_package_name-GF' into Surface_reconstruction_points_3-Change_package_name-GF 2015-09-22 09:54:18 +02:00
Sébastien Loriot 68aa21292a Merge branch 'old/CGAL-Solver-packages-GF' into CGAL-Solver-package-GF 2015-09-21 07:34:18 +02:00
Simon Giraudot a4f242a0cc Replace Internal_diagonalize_traits by Diagonalize_traits + corrections in Concepts/Models 2015-09-16 11:41:26 +02:00
Andreas Fabri 58b7dc7319 fix typo 2015-09-16 09:29:09 +02:00
Andreas Fabri 23740f5921 add a dependency 2015-09-16 09:25:02 +02:00
Simon Giraudot b840307161 Generate compile-time error if Parallel_tag is used without TBB 2015-09-08 15:31:28 +02:00
Simon Giraudot 2c6e6e5e57 Update Reference Manual with additional template parameter 2015-09-08 12:38:34 +02:00
Simon Giraudot 935956a10f Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-08 11:11:07 +02:00
Simon Giraudot 95682d11e0 Update PSP examples with concurrency template 2015-09-08 10:44:36 +02:00
Simon Giraudot 0afe0249f9 Bugfix: badly placed #ifdef caused bug if TBB was not used 2015-09-08 10:42:47 +02:00
Simon Giraudot 63f77a05a5 Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-09-07 10:01:12 +02:00
Simon Giraudot d9d94f082e Update files with new package name (Poisson_surface_reconstruction_3) 2015-09-04 18:18:52 +02:00
Simon Giraudot 136de97318 Bugfix: DiagonalizeTraits now really returns largest eigenvalue + inversion of parameters in voronoi_covariance is corrected. 2015-09-04 16:01:46 +02:00
Simon Giraudot dd271ecca5 Revert "Bugfix: function extract_largest_(...) is now called extract_smallest_(...) to be consistent with what is actually extracted." 
This reverts commit 8410aab93c.
 2015-09-04 15:13:57 +02:00
Simon Giraudot 8410aab93c Bugfix: function extract_largest_(...) is now called extract_smallest_(...) to be consistent with what is actually extracted. 2015-09-03 18:55:19 +02:00
Laurent Rineau 9bae0c0e63 Merge pull request #270 from sgiraudot/Polyhedron_demo-WLOP_plugin-sgiraudot 
Polyhedron demo point set processing plugins
 2015-09-03 17:22:54 +02:00
Simon Giraudot 26aab5fc5c Use default diagonalization interface for VCM functions 2015-09-03 14:36:47 +02:00
Simon Giraudot 8f98d9dc0a Fixed indentation issues 2015-08-31 10:09:54 +02:00
Simon Giraudot 28e5432c16 Renaming 'VCM' to 'diagonalize' 2015-08-31 08:30:01 +02:00
Sébastien Loriot aed4e8b2fc fix doc typos 2015-08-28 15:36:29 +02:00
Simon Giraudot bd7ea48403 Propagating API change to Point_set_processing package (vcm_estimate_*) 2015-08-26 14:01:47 +02:00
Simon Giraudot 146378dd38 Fix compilation errors if TBB is missing (missing #ifdef in the files) 2015-08-24 10:22:54 +02:00
Simon Giraudot 9dccbee9ed Move VCMtraits to Solver package 2015-08-21 09:36:59 +02:00
Simon Giraudot abf9063561 Move Eigen_vcm_traits.h to Solver package 2015-08-20 16:43:58 +02:00
Simon Giraudot af8e73750c Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-08-20 11:51:34 +02:00
Simon Giraudot 05e0965655 Fix warnings of possible loss of data converting std::size_t to unsigned int 2015-08-19 15:22:17 +02:00
Simon Giraudot bf70be5a52 Update function calls with concurrency tag 2015-08-19 11:59:22 +02:00
Simon Giraudot 84528727a1 Fix warning unused variable 2015-08-18 11:50:26 +02:00
Simon Giraudot 24c89aaf00 Added missing TBB includes 2015-08-18 11:49:25 +02:00
Simon Giraudot 77779ff559 PCA estimate normals parallelized with TBB 2015-08-18 11:16:46 +02:00
Simon Giraudot 0902708bfd Removed useless namespace 2015-08-18 11:09:34 +02:00
Simon Giraudot 6f0113054a Removed useless point counter 2015-08-18 11:08:28 +02:00
Andreas Fabri 67d72675fe split packages 2015-08-17 23:46:59 +02:00
Simon Giraudot 9ae599848d Compute average spaciong parallelized with TBB 2015-08-17 12:12:35 +02:00
Simon Giraudot 8fa51591d7 Added missing tbb include 2015-08-17 12:04:38 +02:00
Simon Giraudot 82d91da597 Removed unused propertymap attribute 2015-08-17 08:29:16 +02:00
Simon Giraudot f85b38361a Jet estimate normals parallelized with TBB 2015-08-17 08:28:09 +02:00
Simon Giraudot 34cc20a034 Removed useless function 2015-08-14 17:18:47 +02:00
Simon Giraudot 734c491ac8 Jet smoothing parallelized with TBB 2015-08-14 17:12:02 +02:00
Sébastien Loriot bdc7271990 Fix "remove dont_submit to publish the doc" 
This fixes commit aeffc4587c.
 2015-07-31 09:54:12 +02:00
Sébastien Loriot aeffc4587c remove dont_submit to publish the doc 2015-07-30 17:44:48 +02:00
Sébastien Loriot 2668d83d4e Merge pull request #150 from 'cjamin/Point_set_shape_detection_3-cjamin' 
Add an algorithm to fit geometric primitives on a point set

Conflicts:
	Installation/changes.html
	Polyhedron/demo/Polyhedron/CMakeLists.txt
 2015-07-17 14:32:09 +02:00
Sébastien Loriot 50595505c4 Merge branch 'Fix_warnings-GF' 
Fixes warnings in various packages

Successfully tested in CGAL-4.7-Ic-87
Approved by the release Manager
 2015-07-17 14:21:21 +02:00
Sébastien Loriot d26e112cf4 fix warnings 2015-07-15 16:57:38 +02:00
Laurent Rineau f9917c487e CMake 2.8.11 2015-07-13 12:36:43 +02:00
Clement Jamin 3fac8e761a Merge branch 'Point_set_shape_detection_3-cjamin-old' into Point_set_shape_detection_3-cjamin 2015-06-30 10:36:11 +02:00
Clement Jamin ad91ed562f Fix a warning 2015-06-26 19:20:31 +02:00
Sébastien Loriot 646650be81 disambiguate call to std::sqrt for MSVC10 2015-06-10 16:12:59 +02:00
Sébastien Loriot a2b0267891 increase epsilon bounds 2015-06-08 12:08:08 +02:00
Sébastien Loriot 966f0188b2 force use of std::sqrt 2015-06-08 12:06:23 +02:00
Sébastien Loriot fb2a3a2f50 accomodate update of the halfspace intersection that is now outward oriented 2015-06-05 14:43:55 +02:00
Sébastien Loriot 11a75f1e3c remove extra semi-columns 2015-06-05 14:32:04 +02:00
Sébastien Loriot ca5685db61 add Jocelyn and Quentin as authors of Point set processing package 
Also update history section
 2015-06-04 11:36:45 +02:00
Sébastien Loriot c2cd87865e Merge branch 'old/gsoc2014-VCM_3-jmeyron' into gsoc2014-VCM_3-jmeyron 
Conflicts:
	Installation/changes.html
	Point_set_processing_3/doc/Point_set_processing_3/PackageDescription.txt
	Point_set_processing_3/doc/Point_set_processing_3/Point_set_processing_3.txt
	Point_set_processing_3/doc/Point_set_processing_3/examples.txt
	Point_set_processing_3/examples/Point_set_processing_3/CMakeLists.txt
	Polyhedron/demo/Polyhedron/CMakeLists.txt
 2015-06-04 11:27:56 +02:00
Sébastien Loriot 28067d6470 be more permissive to allow some numeric errors 2015-06-02 16:08:51 +02:00
Sébastien Loriot ee3b7d910e check covariance matrices computed are correct (a subset) 2015-06-02 15:48:08 +02:00
Sébastien Loriot 766bda6853 add a test checking points on a feature edge 2015-06-02 09:40:45 +02:00
Sébastien Loriot a214819b8b write points on feature in a file 2015-06-02 09:40:07 +02:00
Sébastien Loriot d74bd22b8a be more tolerant with the output 2015-06-02 08:36:53 +02:00
Jocelyn MEYRON 4faf09ca53 add one test for the VCM 2015-05-29 15:56:46 +02:00
Sébastien Loriot a2f05fb8bb remove warning 2015-05-19 16:43:27 +02:00
Sébastien Loriot bdba9d2c7c do not convolve if nb neighbors <= 0 2015-05-19 16:09:41 +02:00
Sébastien Loriot 0036cc585e add a switch to use constructions in the covariance computation 2015-05-19 15:28:28 +02:00
Sébastien Loriot 115e22ec29 copy input point to be able to use the insert by range of DT 2015-05-19 15:17:53 +02:00
Sébastien Loriot 1a51d32df9 size_t -> std::size_t 2015-05-19 15:06:14 +02:00
Sébastien Loriot 48b41d8610 avoid using a map to get the index of a point and use reserve 2015-05-19 15:04:36 +02:00
Sébastien Loriot d43529c131 save the indexof the point covariance matrix to avoid a lookup in a map 2015-05-19 11:28:01 +02:00
Laurent Rineau a2ffb7d6f8 Merge pull request #80 from afabri/CGAL-array_as_property_map_example-GF 
Add an example for an array as property map
 2015-05-18 11:17:23 +02:00
Andreas Fabri fcfd9a7fa1 Add the example in the user manual, examples/, and examples.txt 2015-05-11 20:53:51 +02:00
Andreas Fabri 754795d560 remove example that revealed the problem 2015-05-11 20:44:50 +02:00
Andreas Fabri b7f9849599 Replace CGAL::get() with CGAL::get_pointee_or_identity() and remove using get:: 2015-04-30 11:31:21 +02:00
Andreas Fabri b8d9925cbc remove target that does not exist 2015-04-30 10:24:53 +02:00
Sébastien Loriot 82e7da19a5 forgot to init the array 
this is a bug in introduced in this commit:
  |--
  |commit 8bc716abf6
  |Author: Sébastien Loriot <sebastien.loriot@cgal.org>
  |Date:   Mon Apr 20 17:59:52 2015 +0200
  |
  |    directly use CGAL::cpp11::array rather than a custom class
  |--

The initialization was done in the default construtor of the custom class
 2015-04-29 23:31:21 +02:00
Sébastien Loriot 97c8a07289 remove experimental code to extract feature polylines that is not working good 
update the demo plugin accordingly
 2015-04-27 21:42:22 +02:00
Sébastien Loriot c9131379e1 accomodate Pierre's review 2015-04-27 14:15:30 +02:00
Andreas Fabri 688e16b26a Add an example that works with built-in array as property map; Add using ::get 2015-04-24 08:55:38 +02:00
Sébastien Loriot 200229dcec eigen foo -> eigenfoo 2015-04-24 08:52:12 +02:00
Sébastien Loriot 90530f83ce greatest -> largest 2015-04-24 08:38:40 +02:00
Sébastien Loriot 3c7c06e539 rename variables 2015-04-23 15:46:59 +02:00
Sébastien Loriot 8adf56212d overlay -> overload 2015-04-23 15:22:40 +02:00
Andreas Fabri 52382276a8 Escape the word Index with '%' 2015-04-23 12:04:35 +02:00
Sébastien Loriot 94d84aebf7 fix compilation issues 2015-04-23 10:30:02 +02:00
Sébastien Loriot 40c5fc574c make Eigen optional through the abstraction of a concept 2015-04-22 19:54:06 +02:00
Sébastien Loriot c990781b78 fix typo 2015-04-22 19:16:21 +02:00
Sébastien Loriot 6b139d10ae move the eigen traits in the CGAL dir 2015-04-22 19:13:45 +02:00
Sébastien Loriot 1e502253cd gather the usage of eigen into a traits 2015-04-22 19:08:46 +02:00
Sébastien Loriot a0d60a94de remove warnings 2015-04-22 18:43:13 +02:00
Sébastien Loriot 7fab19d2df forgot to rename a is_on_edge 2015-04-22 11:44:04 +02:00
Sébastien Loriot f098d8508c use mathjax for the matrix 2015-04-20 18:39:41 +02:00
Sébastien Loriot 27a3531bd6 rename is_on_edge 2015-04-20 18:31:12 +02:00
Sébastien Loriot e312edf41d add doc todo 2015-04-20 18:30:52 +02:00
Sébastien Loriot 8bc716abf6 directly use CGAL::cpp11::array rather than a custom class 2015-04-20 18:11:25 +02:00
Sébastien Loriot e553310940 update of is_edge and vcm_estimate_normals 2015-04-20 17:40:08 +02:00
Sébastien Loriot d7e6b7dfa8 update doc of vcm_compute 2015-04-20 17:10:40 +02:00
Sébastien Loriot f3d774e005 document the function to know whether a point is on a sharp feature 
and hide the function trying to reconstruct edges
 2015-04-20 17:05:42 +02:00
Sébastien Loriot 5dcc322f78 rename include guards 2015-04-20 16:10:55 +02:00
Sébastien Loriot 8b455b2710 add license headers 2015-04-20 16:09:38 +02:00
Sébastien Loriot 4f177e0e65 move internal details to internal directory 2015-04-20 16:06:55 +02:00
Sébastien Loriot 1f871965ed remove warning and compilation issue 2015-04-14 16:39:36 +02:00
Andreas Fabri df7bcccdc0 change several package descriptions 2015-04-14 11:21:16 +02:00
Clement Jamin 1a2a2004f6 Merge branch 'gsoc2013-Point_set_processing_3-fix-swu_cjamin' of ssh://scm.cgal.org/var/git/cgal-gsoc into gsoc2013-Point_set_processing_3-fix-swu_cjamin 2015-02-20 16:56:13 +01:00
Clement Jamin 6183b02f54 Untabify 2015-02-20 16:55:34 +01:00
Shihao Wu 4825fd601b replaced all "CGAL_DEBUG_MODE" with "CGAL_PSP3_VERBOSE" 2015-02-20 15:43:04 +02:00
Shihao Wu 053ee4d507 Fixed the bug of not initializing CGAL::Bbox_3 
In Debug mode, the default CGAL::Bbox_3 is not (0,0,0,0,0,0)
 2015-02-19 17:27:24 +02:00
Shihao Wu ad20bfab93 CGAL::Bbox_3 might behave differently in Debug/Release mode. 2015-02-19 15:41:37 +02:00
Shihao Wu 6fc6e1ef42 Used another way to prevent the neighbor_size from being set too small in EAR. 
If the value given by user is smaller than the default value,
the function will use the default value instead.
 2015-02-19 15:07:09 +02:00
Clement Jamin 60f382034d Updated doc and default value for neighbor radius 2015-02-18 18:00:20 +01:00
Clement Jamin a8ac79dbc4 More doc about neigbor_radius params 2015-02-18 17:46:47 +01:00
Sébastien Loriot c3c749ef0b Merge branch 'Point_set_processing-IO-GF' 
improve doc and IO in examples

  Tested in CGAL-4.6-Ic-126
  Approved by the release manager

Conflicts:
	Point_set_processing_3/examples/Point_set_processing_3/wlop_simplify_and_regularize_point_set_example.cpp
 2015-02-16 10:42:27 +01:00
Sébastien Loriot da7e2e0f1e missing backtick 2015-02-16 08:38:21 +01:00
Sébastien Loriot faa598a9ab prevent the creation of an empty internal namespace in the doc 
trivial bugfix for master
 2015-02-13 15:13:23 +01:00
Sébastien Loriot 66c8fe04de revert part of ef6488a7 that was supposed to be only a typo fix 
|---------------------------------------------------
  |commit ef6488a7c6
  |Author: Andreas Fabri <andreas.fabri@geometryfactory.com>
  |Date:   Thu Feb 5 09:40:06 2015 +0100
  |
  |  fix typo
  |
  |  Approved by the release manager (SL interim)
  |--------------------------------------------------
 2015-02-11 09:29:14 +01:00
Andreas Fabri a3cb5af9b0 more wording fixes for value type 2015-02-06 12:06:14 +01:00
Andreas Fabri 1e99228829 improve wording concerning value_type 2015-02-05 14:53:01 +01:00
Andreas Fabri f1bd6f1627 All examples now read from argv if argc!= 1 2015-02-05 14:29:20 +01:00
Andreas Fabri ef6488a7c6 fix typo 
Approved by the release manager (SL interim)
 2015-02-05 09:40:06 +01:00
Andreas Fabri 2ae1d649c2 capitlize words in \subsection 2015-01-28 16:53:05 +01:00
Laurent Rineau ff62595012 Merge branch 'CGAL-fix_compilation_boost_1_56-lrineau' 
Fix compilation issues with Boost-1.56 and later.

Approved by the Release Manager.
 2015-01-26 11:42:29 +01:00
Laurent Rineau 59a7f710dd Merge branch 'Spatial_searching-final_acceleration-gf' 
Improve the performance of Spatial Searching.

Small features:

  https://cgal.geometryfactory.com/CGAL/Members/wiki/Features/Small_Features/Spatial_searching_performance_optimization

  https://cgal.geometryfactory.com/CGAL/Members/wiki/Features/Small_Features/spatial_searching_compiletimeD

Approved by the Release Manager

Conflicts:
	Installation/changes.html
 2015-01-15 15:31:35 +01:00
Laurent Rineau f65a2fa71f Re-disable the iterator debugging for that test 2015-01-15 15:26:17 +01:00
Laurent Rineau 48fa201043 Add a comment about a bug in Boost-1.56 2015-01-14 14:48:11 +01:00
Sébastien Loriot ab133ebe3d move implementation detail out of the scope of include/CGAL 
trivial bug fix for master
 2015-01-13 18:31:28 +01:00
Clement Jamin 1ecb4da13b Add new xyz file 2015-01-09 16:43:12 +01:00
Clement Jamin c73e67db59 The test was too slow in Debug mode 2015-01-09 16:35:19 +01:00
Clement Jamin ecda2555ab Merge branch 'gsoc2013-Point_set_processing_3-point_set_consolidation-swu-old' into gsoc2013-Point_set_processing_3-point_set_consolidation-swu 2015-01-09 15:55:40 +01:00
Clement Jamin fe47edc68a Faster example 2015-01-09 15:51:09 +01:00
Clement Jamin c853129ac8 Reduce the number of points (the execution is too long for the testsuite) 2015-01-08 17:52:18 +01:00
Laurent Rineau 188ee42012 Restore the executable bit of all scripts 2015-01-07 17:54:56 +01:00