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308 Commits

Author SHA1 Message Date
Sébastien Loriot 35b83deffd Update branch from master after trailing whitespaces and tabs removal 2020-03-26 19:16:25 +01:00
Sébastien Loriot 8bb22d5b2c extra run of the script to remove tabs and trailing whitespaces 
right after the merge of the 5.0 release branch

+ manual fix of the files (indentation was changed in the meantime):
   * Spatial_sorting/include/CGAL/Multiscale_sort.h
   * Spatial_sorting/test/Spatial_sorting/test_multiscale.cpp
 2020-03-26 14:26:59 +01:00
Sébastien Loriot 8b153fb495 Merge branch 'cgal/releases/CGAL-5.0-branch' 
whitespace+tab removal, merged with option -Xignore-space-change
 2020-03-26 14:22:32 +01:00
Sébastien Loriot 0779373835 extra run of the script to remove tabs and trailing whitespaces 
right after the  merge of 4.14 release branch

+ manual fix on one line in:
    * Arrangement_on_surface_2/include/CGAL/IO/Arr_text_formatter.h
    * .travis/generate_travis.sh
 2020-03-26 14:16:06 +01:00
Sébastien Loriot 0a46621dc6 Merge branch 'cgal/releases/CGAL-4.14-branch' 
whitespace+tab removal, merged with option -Xignore-all-space
 2020-03-26 13:28:46 +01:00
Sébastien Loriot 590612a563 run the script to remove tabs and trailing whitespaces 2020-03-26 13:25:16 +01:00
Mael Rouxel-Labbé 2556196dad Merge remote-tracking branch 'cgal/master' into CGAL-Optimal_bounding_box-GF 2020-03-23 08:59:49 +01:00
Mael Rouxel-Labbé 3e365756ca Merge branch 'CGAL-Optimal_bounding_box-GF-old' into CGAL-Optimal_bounding_box-GF 2020-03-09 16:54:25 +01:00
Simon Giraudot ea30bcc85d Fix remaining CMakeLists.txt 2020-02-10 11:57:56 +01:00
Simon Giraudot 6c8fd43ebb Use CGAL_target_use_* mechanism for Eigen, LASLIB, OpenCV, TensorFlow, GLPK, SCIP, Boost IOStreams and Serialization 2020-02-10 11:57:56 +01:00
Mael Rouxel-Labbé 4f56fdff8e Minor addition to the SVD::Matrix concept 2019-12-10 08:19:07 +01:00
Mael Rouxel-Labbé ba1c21f3bd Enhance CGAL::Eigen_matrix 2019-12-09 18:48:46 +01:00
Mael Rouxel-Labbé 127bf54e44 Give Eigen_sparse_matrix its own file 
The idea is that it is clearer that Eigen_matrix exists
 2019-12-09 16:39:19 +01:00
Mael Rouxel-Labbé 51e965e1dc Rewrite most of OBB code to fix design issues and bugs 2019-12-09 12:25:38 +01:00
Mael Rouxel-Labbé b76ce69489 Fix two solvers not showing up in documentation 2019-12-04 12:00:33 +01:00
Mael Rouxel-Labbé cd4123bf2c Clean code (partial) 2019-12-04 11:33:36 +01:00
Mael Rouxel-Labbé edefc616f3 Merge branch 'CGAL-Optimal_bounding_box-GF-old' into CGAL-Optimal_bounding_box-GF 2019-12-03 16:28:19 +01:00
Mael Rouxel-Labbé 9ed1a87905 Merge branch 'CGAL-Optimal_bounding_box-GF-old' into CGAL-Optimal_bounding_box-GF 2019-10-20 20:45:49 +02:00
Sébastien Loriot 52164b1fba First pass on removing license notice in header for LGPL files 2019-10-19 15:40:30 +02:00
Sébastien Loriot 7356421d80 introduce Commercial license SPDX tag 2019-10-19 12:15:19 +02:00
Sébastien Loriot 9bd9c68b83 update LGPL[23]+ and GPL[23]+ SPDX tags 
ack -l --no-svg "SPDX-License-Identifier: GPL-3.0\+" | xargs sed -i "s/SPDX-License-Identifier: GPL-3.0+/SPDX-License-Identifier: GPL-3.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: LGPL-3.0\+" | xargs sed -i "s/SPDX-License-Identifier: LGPL-3.0+/SPDX-License-Identifier: LGPL-3.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: GPL-2.0\+" | xargs sed -i "s/SPDX-License-Identifier: GPL-2.0+/SPDX-License-Identifier: GPL-2.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: LGPL-2.0\+" | xargs sed -i "s/SPDX-License-Identifier: LGPL-2.0+/SPDX-License-Identifier: LGPL-2.0-or-later/"
 2019-10-18 21:57:54 +02:00
Maxime Gimeno be306a3584 Fix the blue line in testsuite 2019-07-09 15:03:44 +02:00
Maxime Gimeno d75842159b Fix warnings in tests and examples 2019-07-02 11:39:53 +02:00
Liangliang Nan f41848dc3b fixed two typos and removed an unnecessary include directory in CMakeLists files 2019-07-01 15:34:23 +02:00
Maxime Gimeno 44327dbde8 Hide all implem in #ifndef doxygen_running to silent all doxygen warnings. 2019-07-01 15:05:12 +02:00
Maxime Gimeno 7155df2743 Merge remote-tracking branch 'cgal/master' into liangliang_master 2019-07-01 14:59:24 +02:00
Maxime Gimeno e95f687d58 set the find_package() QUIET 2019-06-27 09:30:52 +02:00
Maxime Gimeno 5014906e25 Fix add_definitions 2019-06-26 10:30:30 +02:00
Maxime Gimeno f31e0bee83 Fix CMakeLists for the right CMAKE versions. 2019-06-26 10:04:03 +02:00
Liangliang Nan 0c3c661458 added namespace "CGAL::" to avoid name conflicts. 2019-06-25 14:22:28 +02:00
Liangliang Nan 4588ba5d9d Merge branch 'master' of https://github.com/CGAL/cgal 2019-06-19 15:08:53 +02:00
Liangliang Nan 010f05dfeb find GLPK 
- added FindGLPK.cmake
- try to find SCIP first. If not, try to find GLPK
 2019-06-19 15:02:27 +02:00
Laurent Rineau 4fbf00fb8a CMake>=3.13: opt for for new policies up to 3.15 2019-06-19 14:34:59 +02:00
Maxime Gimeno b12d59dc4e Fix the test CMakeLists.txt for GLPK 2019-06-13 13:33:53 +02:00
Liangliang Nan 512a429de8 added missing <cmath> in MIP solvers 2019-06-11 16:54:13 +02:00
Liangliang Nan cd673786a5 Use LGPL-3.0+ license (to be consistent with other parts) 2019-06-11 13:58:18 +02:00
Liangliang Nan e4ea59e852 fixed a typo 2019-06-06 10:01:20 +02:00
Liangliang Nan d4b4640139 corrected references (using the new names of the packages) 2019-06-06 00:30:01 +02:00
Liangliang Nan 3ffc43df9d tests if SCIP exists before creating the project 2019-06-05 21:32:10 +02:00
Liangliang Nan fadaee63a8 integrated PolyFit 2019-06-05 17:50:37 +02:00
Andreas Fabri e2d19b0c8d Replace NULL and Nullptr_t with nullptr and nullptr_t 2019-06-04 23:45:44 +02:00
Laurent Rineau 7bcad36d7e
Merge branch 'master' into Installation-remove_FindBLAS_LAPACK_TAUCS-GF 2019-05-14 16:03:28 +02:00
Sébastien Loriot db65bd8ecc Merge remote-tracking branch 'cgal/releases/CGAL-4.14-branch' 2019-04-11 21:38:48 +02:00
Sébastien Loriot 2eb411d337 update Eigen links 2019-04-11 21:37:05 +02:00
albert-github 1dd7473818 Correction of links 
Correction of redirected links and links that moved to another place.
 2019-04-11 21:37:05 +02:00
Simon Giraudot d8b51a9672 Merge remote-tracking branch 'laurent/Installation-remove_FindBLAS_LAPACK_TAUCS-GF' into Installation-remove_FindBLAS_LAPACK_TAUCS-GF 2019-04-09 15:22:45 +02:00
Sébastien Loriot 124012d9f9 replace cpp11::array by std::array 2019-03-29 13:28:33 +01:00
Andreas Fabri 7c2674abc8 More links fixed 2019-03-20 08:38:40 +01:00
Simon Giraudot 911bea4021 Remove Lapack support from Jet_fitting, PSP, Ridges and Solver_interface 2019-03-08 09:53:21 +01:00
Laurent Rineau 8693f95dac Merge pull request #3619 from albert-github/feature/bug_headers 
Update of headers
 2019-02-22 16:39:09 +01:00
Laurent Rineau e3fbdb161f Merge pull request #3683 from afabri/CGAL_CMakeLists_cleanup-GF 
CGAL: clean up CMakeLists.txt files in examples and tests
 2019-02-22 16:38:58 +01:00
Maxime Gimeno c93b8ee498 add missing concept to the packagedescription of solver_interface 2019-02-15 11:45:20 +01:00
Sébastien Loriot a5576cd3fb replace markdown subsections by \cgalHeading 2019-02-14 10:53:48 +01:00
Sébastien Loriot 59bc453b42 first batch of replacement for level 1 in classified ref man 
command used:
grep -l  "##" */doc/*/PackageDescription.txt | xargs  sed -i  -E 's/\#\#\s*([[:print:]]+[[:alnum:]])\s*\#\#\s*$/\\cgalCRPSection{\1}/'
 2019-02-14 10:32:39 +01:00
Andreas Fabri a483f3442b CGAL: clean up CMakeLists.txt files in examples and tests 2019-02-13 17:29:29 +01:00
Sébastien Loriot e4cbae525c Merge remote-tracking branch 'cgal/releases/CGAL-4.13-branch' into HEAD 2019-01-31 11:25:26 +01:00
Sébastien Loriot 99d842401a Merge remote-tracking branch 'cgal/releases/CGAL-4.12-branch' into HEAD 2019-01-31 11:24:50 +01:00
Sébastien Loriot 1d64eae843 reduce brief 2019-01-14 17:58:49 +01:00
Maxime Gimeno 2a49dfcb05 Fix conflict 2019-01-11 09:47:34 +01:00
Andreas Fabri 162d74baef Some changes after Sebastien's review 2018-12-11 12:15:16 +01:00
Andreas Fabri 047938e068 Try to fix warnings (which I cannot reproduce locally) 2018-11-26 10:00:23 +01:00
Sébastien Loriot db87cc916c add missing namespace 2018-11-14 18:59:36 +01:00
Sébastien Loriot e0c5a25316 fix concept 2018-11-13 21:47:08 +01:00
Sébastien Loriot 1d04a47326 use and document Index type 2018-11-13 21:26:00 +01:00
Sébastien Loriot 67d75ec6db fix warning 
init array in case of failure to diagonalize
 2018-11-13 08:48:09 +01:00
Andreas Fabri 5b62f06871 Fix merge conflicts 2018-11-12 13:02:52 +01:00
Guillaume Damiand 7d406fbb9c
Merge branch 'master' into CGAL-cmake_cleanup-gdamiand 2018-11-05 07:32:58 +01:00
Andreas Fabri 38bd4bd2b6 Don't resize() as that assembles the matrix and makes add_coef() slow 2018-10-30 12:09:43 +01:00
Laurent Rineau 821f9c015e Merge pull request #3311 from sloriot/Doc-Pkg_link_name 
Update the name of package names reference links
 2018-10-29 10:27:53 +01:00
Sébastien Loriot 72acbee3f5 fix warnings 2018-10-24 11:12:55 +02:00
Sébastien Loriot a2d0c406a7 add an option to disable the warning 2018-10-18 16:36:17 +02:00
Guillaume Damiand 92ba7fa6c9 Update minimum cmake required version in all CMakeLists.txt 2018-10-18 14:49:23 +02:00
Guillaume Damiand 0bd9088b5a Remove all include( ) and include( CGAL_CreateSingleSourceCGALProgram ) in CMakeLists.txt; they are no more required. 2018-10-17 14:17:08 +02:00
Sébastien Loriot 2f9408f867 rename link name to match package name 2018-10-08 10:28:55 +02:00
Sébastien Loriot 3dd0aa112d rename macro not following the convention 2018-10-08 10:28:55 +02:00
Sébastien Loriot ea240cfac5 use \PkgXXX instead of \PkgXXXSummary 2018-10-08 10:28:44 +02:00
Sébastien Loriot a2e8a1c68f add the suffix Ref to doxygen link to reference 2018-10-08 10:26:56 +02:00
Andreas Fabri e7740e16e8 Add example with free function and reorder sections in manual 2018-09-11 17:32:53 +02:00
Andreas Fabri 3580b5a511 Move code into the trahts class 2018-09-05 14:56:07 +02:00
Andreas Fabri d336746cd1 bug fix 2018-09-04 18:06:57 +02:00
Andreas Fabri 4e6293d940 Switch to CGAL::Eigen_matrix 2018-09-04 17:48:42 +02:00
Simon Giraudot 7048b5cb17 Update diagonalize traits inclusions + deprecation warnings 2018-06-19 10:57:55 +02:00
Simon Giraudot 41d554fe58 Deprecating Diagonalize_traits: document dependency to Eigen 2018-06-19 10:57:55 +02:00
Simon Giraudot 4599787d67 Improve deprecated message 2018-06-19 10:57:55 +02:00
Simon Giraudot c0da4fcef5 Warn against using CGAL diagonalize traits 2018-06-19 10:57:55 +02:00
Simon Giraudot 678333a272 More precisions about Eigen_diagonalize_traits 2018-06-19 10:57:55 +02:00
Konstantinos Katrioplas 7803481af9 requested changes: impoving API with default Linear algebra traits, better use of template parameters at free functions, prefer using convex hull overload which does not depend on the kernel. 2018-06-11 14:46:56 +02:00
Konstantinos Katrioplas ca1d427dc5 remove mutable and fix small typo 2018-06-11 14:46:55 +02:00
Konstantinos Katrioplas 00c782b277 documentation 2018-06-11 14:46:55 +02:00
Konstantinos Katrioplas 0c215dfecb use a matrix with dynamic rows and columns are run time for points, because it is a little faster than fixed columns 2018-06-11 14:46:55 +02:00
Konstantinos Katrioplas 820e9c6098 return precompiled 3-column row only & some cleaning 2018-06-11 14:46:55 +02:00
Konstantinos Katrioplas aac227eed4 small errors 2018-06-11 14:46:54 +02:00
Konstantinos Katrioplas bb284396d2 benchmark code and benchmark on fitness function 2018-06-11 14:46:54 +02:00
Konstantinos Katrioplas 819e38d6a1 making sure that all matrix allocations happen at compile time when possible 2018-06-11 14:46:54 +02:00
Konstantinos Katrioplas 63e1a12924 clear warnings & clean eigen eigen linear algrebra traits 2018-06-11 14:46:54 +02:00
Konstantinos Katrioplas 5380ebac1b eigen linear algebra traits 2018-06-11 14:46:54 +02:00
Konstantinos Katrioplas 2571c7719e abstract interface for eigen dense matrix 2018-06-11 14:46:53 +02:00
Laurent Rineau 0a74393dcf Commit all new dependencies files 2018-03-06 18:44:48 +01:00
Sébastien Loriot 704fe9563b do not use uppercase name for variables 2018-02-16 14:15:02 +01:00
Maxime Gimeno 688b5dd06e Move dependencies creation to package_info and add dependencies to git 2018-02-02 12:08:05 +01:00