by namespace CGAL { and } //namespace CGAL. in all .h and .cpp files
in a directory.
Apply it to all packages in the trunk
Remove macro definition from the config.h file.
svn+ssh://lrineau@scm.gforge.inria.fr/svn/cgal/branches/CGAL-3.5-branch
Personal note: Actually all merges were already done in the trunk manually
by authors, as far as I have seen. I have ignored several conflicts in
Mesh_3 and packages from Laurent Saboret, because I know the authors of
these packages already manage patchs to 3.5 and trunk manually. All the
changes here seem to be fixes to package descriptions (change -08 to -09).
........
r51561 | stayeb | 2009-08-27 17:41:39 +0200 (Thu, 27 Aug 2009) | 8 lines
Merge r51076
From trunk/Mesh_3/include/CGAL/Labeled_image_mesh_domain_3.h to branches/CGAL-3.5-branch/Mesh_3/include/CGAL/Labeled_image_mesh_domain_3.h
r51076 | stayeb | 2009-08-05 17:40:23 +0200 (Wed, 05 Aug 2009) | 3 lines
* Fix bug with image bounding box computation
* Add internal(undocumented) usefull genericity:
+ add Wrapper template parameter (with default value) in Labeled_Image_mesh_domain_3
........
r51678 | lsaboret | 2009-09-02 14:16:10 +0200 (Wed, 02 Sep 2009) | 6 lines
svn merge bug fix from trunk to CGAL-3.5-branch:
r51677 | lsaboret
Port to Windows 64
........
r51694 | stayeb | 2009-09-02 16:30:21 +0200 (Wed, 02 Sep 2009) | 1 line
add multilabel_mesh_small picture.
........
r51699 | lrineau | 2009-09-02 16:42:46 +0200 (Wed, 02 Sep 2009) | 35 lines
Merge the following revision from trunk into the 3.5 branch:
| ------------------------------------------------------------------------
| r51688 | lrineau | 2009-09-02 16:07:12 +0200 (Wed, 02 Sep 2009) | 2 lines
|
| A new solution for the "how_to_cite stuff"
|
| ------------------------------------------------------------------------
| r51689 | lrineau | 2009-09-02 16:08:14 +0200 (Wed, 02 Sep 2009) | 2 lines
|
| Remove the last non-constant part of the script makebiblio !!! :-)
|
| ------------------------------------------------------------------------
| r51679 | lrineau | 2009-09-02 14:48:37 +0200 (Wed, 02 Sep 2009) | 4 lines
|
| Fix after Monique's suggestion... Just kidding! :-)
|
| Actually, we do not want CGAL Editorial Board to be abbrev. to "C.E.Board".
|
| ------------------------------------------------------------------------
| r51680 | lrineau | 2009-09-02 14:52:09 +0200 (Wed, 02 Sep 2009) | 2 lines
|
| Protect Minkowski and Boolean with {}.
|
| ------------------------------------------------------------------------
| r51692 | lrineau | 2009-09-02 16:15:22 +0200 (Wed, 02 Sep 2009) | 6 lines
|
| Fixes:
| - Remove the links "BACK TO INDEX" that were auto-generated by
| bibtex2html
| - Remove several "and and".
| - Replace the labels: "08" -> "09".
|
| ------------------------------------------------------------------------
........
r51702 | yvinec | 2009-09-02 16:51:07 +0200 (Wed, 02 Sep 2009) | 3 lines
fixed PkgDescription.tex
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r51714 | spion | 2009-09-02 18:46:41 +0200 (Wed, 02 Sep 2009) | 4 lines
Backport revision 51047.
Replace wrong use of $$ by \ccc{}.
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r51738 | lrineau | 2009-09-03 09:24:23 +0200 (Thu, 03 Sep 2009) | 2 lines
Import revision 51737 from trunk: fix the how_to_cite_cgal.html file
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r51758 | lrineau | 2009-09-03 12:14:14 +0200 (Thu, 03 Sep 2009) | 1 line
Fix all \ccPkgHowToCiteCgal at once to turn 08 into 09
........
r51769 | lrineau | 2009-09-03 14:03:23 +0200 (Thu, 03 Sep 2009) | 14 lines
Merge from trunk:
| ------------------------------------------------------------------------
| r51754 | teillaud | 2009-09-03 11:45:05 +0200 (Thu, 03 Sep 2009) | 2 lines
|
| added missing file, needed by makebiblio
|
| ------------------------------------------------------------------------
| r51755 | teillaud | 2009-09-03 11:48:45 +0200 (Thu, 03 Sep 2009) | 2 lines
|
| layout file for makebiblio (use of ccs)
|
| ------------------------------------------------------------------------
........
r51771 | lrineau | 2009-09-03 14:20:50 +0200 (Thu, 03 Sep 2009) | 10 lines
Merge from trunk:
| ------------------------------------------------------------------------
| r51770 | teillaud | 2009-09-03 14:14:17 +0200 (Thu, 03 Sep 2009) | 3 lines
|
| a few buggy labels fixed
| obviously, it was not a good idea to write them using the keyboard alone, not even the mouse... :(
|
| ------------------------------------------------------------------------
........
r51778 | lrineau | 2009-09-03 16:38:42 +0200 (Thu, 03 Sep 2009) | 3 lines
Fill the file global_dont_submit, so that one can simplify the script that
creates releases.
........
r51787 | lsaboret | 2009-09-03 18:00:04 +0200 (Thu, 03 Sep 2009) | 15 lines
Merge bug fixes from trunk to CGAL-3.5-branch:
r51785 | lsaboret
* Fixed images width (as requested by LR):
set max-width instead of width in HTML.
* Also set width=1.0 for most images in PDF (prettier).
r51749 | lsaboret
Fixed warning with boost >= 10.38 in Point_set_processing_3.
r51683 | lsaboret
Fixed compilation error due to the global change "CGALi" -> "internal" in trunk
(this revision is merged into CGAL-3.5-branch by safety)
........
r51814 | teillaud | 2009-09-04 10:16:38 +0200 (Fri, 04 Sep 2009) | 2 lines
files generated after yesterday's fixes on manual-3.5.bib
........
r51831 | lsaboret | 2009-09-04 13:38:11 +0200 (Fri, 04 Sep 2009) | 6 lines
Merge bug fix from trunk to CGAL-3.5-branch:
r51830 | lsaboret
Fixed compilation error introduced in r51749
........
r51868 | lrineau | 2009-09-07 17:01:48 +0200 (Mon, 07 Sep 2009) | 2 lines
Fix the non-filtering of BBox_3-Segment_3 intersection.
........
r51889 | palliez | 2009-09-10 17:02:29 +0200 (Thu, 10 Sep 2009) | 1 line
fix pca bug
........
r51895 | lsaboret | 2009-09-10 18:34:35 +0200 (Thu, 10 Sep 2009) | 66 lines
Merge bug fixes from trunk to CGAL-3.5-branch:
r51894 | lsaboret
Added traces
r51893 | lsaboret
Fixed bug introduced in r51683:
(Windows) developers compiling Surface_reconstruction_points_3 with CGAL 3.5 beta 1 need to compile with Surface_mesher package from svn in order to get r51028 bug fix (orientation of reconstructed meshes).
r51887 | lsaboret
Fixed bug in test suite:
* The bug occured (sometimes) in test suite when calling
> APSS_reconstruction_test data/robocat_deci.off
=> assertion failure "CGAL::Polyhedron_incremental_builder_3<HDS>::
lookup_halfedge(): input error: facet 1462 shares a halfedge from vertex 95 to vertex 808 with facet 1312."
in output_surface_facets_to_polyhedron().
This means that the reconstructed surface is not manifold.
* The reason seems that (on this example) APSS implicit function is not smooth enough for make_surface_mesh().
* The fix was to set APSS smoothness factor to 6 (default is 2).
r51886 | lsaboret
Partial fix of assertion failure "(x,y,z) is already inserted on surface" in make_surface_mesh():
* The bug could be reproduce by:
> poisson_reconstruction Compressor_top_clean_65kpoints.pwn out.off -sm_distance 0.75
or
> APSS_reconstruction robocat_deci.off out.off -smooth 6
(try several times)
* The fix is to set Implicit_surface_3's dichotomy error to make_surface_mesh's approximation distance/1000 (instead of /10). This makes make_surface_mesh() behavior more reproductible.
* My guess is that in both implicit functions are not smooth, and that make_surface_mesh's parameters must be tuned to make them appear smooth to the algorithm.
r51884 | lsaboret
Temporary traces: turn on CGAL assertions
r51883 | lsaboret
Temporary traces: turn on CGAL assertions
r51873 | lsaboret
Fixed bug in make_surface_mesh(implicit surface, sphere, Manifold_tag) when the implicit surface crosses the sphere:
* The bug could be reproduced on Linux/g++ 4.3.1 by:
> poisson_reconstruction Compressor_top_clean_30kpoints.pwn Compressor-poisson.off
or
> APSS_reconstruction robocat_deci.off robocat_deci-apss.off
=> infinite loop that crashes when the process max memory is reached, or
assertion failure "(x,y,z) is already inserted on surface", or
assertion failure "A facet is not in conflict with its refinement point"
* The fix was to use Manifold_with_boundary_tag.
r51871 | palliez
update barycentric coordinates - thanks Andreas.
r51869 | lsaboret
Fixed assertion failure "tester(d)" in Triangulation_3::find_conflicts() when running the Delaunay refinement:
* To reproduce the bug:
> poisson_reconstruction data/sphere926.pwn sphere926-poisson.off
(try several times)
* The fix is:
- implement Robust_circumcenter_filtered_traits_3::compute_squared_radius_3_object()
- compare denominator with 1E-13 (instead of 1E-14) to switch to exact arithmetic
r51865 | lsaboret
Fixed infinite loop in Min_sphere_d:
* On Linux/g++, the bug could be reproduced by:
> poisson_reconstruction data/sphere926.pwn sphere926-poisson.off
* The fix was do use Min_sphere_of_spheres_d instead of Min_sphere_d
........
r51901 | palliez | 2009-09-11 09:13:41 +0200 (Fri, 11 Sep 2009) | 1 line
PCA: undo recent change - there was no bug
........
r51902 | lrineau | 2009-09-11 10:44:55 +0200 (Fri, 11 Sep 2009) | 16 lines
Remove mention to piecewise smooth surfaces. The following revision forgot
to remove those two paragraphs:
| ------------------------------------------------------------------------
| r46327 | lrineau | 2008-10-17 14:35:23 +0200 (Fri, 17 Oct 2008) | 3 lines
| Changed paths:
| M /trunk/Surface_mesher/doc_tex/Surface_mesher/main.tex
| M /trunk/Surface_mesher/doc_tex/Surface_mesher_ref/SurfaceMeshFacetsCriteria_3.tex
| M /trunk/Surface_mesher/doc_tex/Surface_mesher_ref/Surface_mesh_complex_2_in_triangulation_3.tex
| M /trunk/Surface_mesher/doc_tex/Surface_mesher_ref/intro.tex
| M /trunk/Surface_mesher/doc_tex/Surface_mesher_ref/main.tex
|
| Update documentation for CGAL-3.4: remove any occurrence of "polyhedral
| [surfaces]" and "piecewise [smooth surfaces]"
|
| ------------------------------------------------------------------------
........
r51931 | stayeb | 2009-09-14 15:22:12 +0200 (Mon, 14 Sep 2009) | 1 line
Fix bbox_3_segment_3 intersection for filtered kernels.
........
r51932 | lrineau | 2009-09-14 15:32:24 +0200 (Mon, 14 Sep 2009) | 3 lines
Fix predicates of <CGAL/AABB_intersection.h>, so that they are correctly
filtered when called from the global function template CGAL::do_intersect
........
r51936 | stayeb | 2009-09-14 19:37:18 +0200 (Mon, 14 Sep 2009) | 2 lines
* Fix ray_bbox & line_bbox do_intersect predicates for filtered kernels
* add a small test for do_intersect(seg/ray/line, bbox) queries
........
r51937 | stayeb | 2009-09-14 19:52:01 +0200 (Mon, 14 Sep 2009) | 1 line
Fix polyhedral oracle issue: switch to exact intersection computation.
........
r51939 | stayeb | 2009-09-15 10:56:32 +0200 (Tue, 15 Sep 2009) | 1 line
Fix minor bug in aabb_do_intersect_test.cpp
........
r51948 | spion | 2009-09-15 19:09:03 +0200 (Tue, 15 Sep 2009) | 5 lines
Rename following the converging convention to prevent future incompatibility :
- Vertex_container -> Vertex_range
- Face_container -> Face_range
- Cell_container -> Cell_range
........
r51953 | stayeb | 2009-09-16 13:17:12 +0200 (Wed, 16 Sep 2009) | 1 line
Fix AABB_tree missing default ctor.
........
r51954 | stayeb | 2009-09-16 14:40:50 +0200 (Wed, 16 Sep 2009) | 6 lines
Merge [r51090]
From trunk/Mesh_3 to branches/CGAL-3.5-branch/Mesh_3.
r51090 | stayeb
* Labels are now ordered according to their natural order (instead of randomly) in medit output.
........
r51957 | stayeb | 2009-09-17 10:20:36 +0200 (Thu, 17 Sep 2009) | 1 line
cleanup example folder.
........
r51960 | stayeb | 2009-09-17 13:10:50 +0200 (Thu, 17 Sep 2009) | 1 line
Remove wrong using namespace statement.
........
r51999 | lsaboret | 2009-09-22 10:27:10 +0200 (Tue, 22 Sep 2009) | 1 line
Removed debugging traces
........
r52026 | lrineau | 2009-09-28 14:18:10 +0200 (Mon, 28 Sep 2009) | 2 lines
Add a minor changelog from CGAL-3.5-beta1.
........
r52075 | lrineau | 2009-09-30 17:24:08 +0200 (Wed, 30 Sep 2009) | 2 lines
Fix the display of the manual testsuite: pdflatex before bibtex and so on.
........
r52079 | lrineau | 2009-10-01 00:21:47 +0200 (Thu, 01 Oct 2009) | 1 line
Fix links to Boost property maps documentation.
........
r52094 | lrineau | 2009-10-01 17:43:44 +0200 (Thu, 01 Oct 2009) | 2 lines
Fix the background of dev manual
........
r52095 | lrineau | 2009-10-01 18:06:36 +0200 (Thu, 01 Oct 2009) | 4 lines
#include <cstdio> is needed, with recent g++ compilers, to find the BUFSIZ
macro.
........
r52096 | lrineau | 2009-10-01 18:07:03 +0200 (Thu, 01 Oct 2009) | 3 lines
Detect images that are linked with background=...
........
r52101 | lrineau | 2009-10-01 18:32:46 +0200 (Thu, 01 Oct 2009) | 2 lines
Fix the bibtex entry of Mesh_3: incorrect title
........
r52102 | lrineau | 2009-10-01 18:34:59 +0200 (Thu, 01 Oct 2009) | 2 lines
Real fix of the bib entry of Mesh_3!
........
r52103 | lrineau | 2009-10-01 18:36:08 +0200 (Thu, 01 Oct 2009) | 1 line
Commit of changes to how_to_cite in the manual tools... (fix the mesh_3 entry)
........
r52104 | lrineau | 2009-10-01 18:41:39 +0200 (Thu, 01 Oct 2009) | 2 lines
Error checking
........
r52105 | lrineau | 2009-10-01 18:49:38 +0200 (Thu, 01 Oct 2009) | 2 lines
Add README files about the generation of the how_to_cite_cgal stuff.
........
r52110 | lrineau | 2009-10-02 10:55:03 +0200 (Fri, 02 Oct 2009) | 2 lines
Fix HTML errors in the manual testsuite results pages.
........
r52111 | lrineau | 2009-10-02 11:11:46 +0200 (Fri, 02 Oct 2009) | 3 lines
Add the link to the HTML validator. The manual testsuite pages validate,
now.
........
r52115 | lrineau | 2009-10-02 16:47:37 +0200 (Fri, 02 Oct 2009) | 2 lines
Minor fix of the output of the manual testsuite.
........
r52141 | lrineau | 2009-10-05 14:28:24 +0200 (Mon, 05 Oct 2009) | 2 lines
Patch from Olivier Devillers: add a check in is_valid.
........
r52142 | lrineau | 2009-10-05 14:33:01 +0200 (Mon, 05 Oct 2009) | 2 lines
CGAL-3.5 published. Let's target 3.5.1, now.
........
r52143 | lrineau | 2009-10-05 14:39:18 +0200 (Mon, 05 Oct 2009) | 2 lines
Fix a link in the bibtex file.
........
r52150 | lrineau | 2009-10-05 19:01:43 +0200 (Mon, 05 Oct 2009) | 3 lines
Update the LaTeX label for "3D Periodic Triangulations" (the previous one
was a copy-paste from TDS_3).
........
r52151 | reichel | 2009-10-05 22:47:27 +0200 (Mon, 05 Oct 2009) | 2 lines
update Debian stuff for 3.5-1
........
r52197 | lrineau | 2009-10-07 21:57:10 +0200 (Wed, 07 Oct 2009) | 2 lines
Boost 1.33.1 *or higher* is needed.
........
r52582 | mcaroli | 2009-10-16 10:19:24 +0200 (Fri, 16 Oct 2009) | 3 lines
bugfix I/O operator
merge of revision 52311 from trunk
........
r52584 | mcaroli | 2009-10-16 10:45:08 +0200 (Fri, 16 Oct 2009) | 3 lines
minor improvements in the reference documentation.
this is a merge from the trunk
........
r52618 | mcaroli | 2009-10-19 17:50:53 +0200 (Mon, 19 Oct 2009) | 2 lines
move the new check in is_valid to the right place (cf. r52141)
........
r52733 | mcaroli | 2009-10-26 10:15:53 +0100 (Mon, 26 Oct 2009) | 11 lines
Merge revisions r52701 and r52704 from trunk:
| ------------------------------------------------------------------------
| r52701 | mcaroli | 2009-10-23 11:15:57 +0200 (Fri, 23 Oct 2009) | 2 lines
|
| add the domain to the basic example
| ------------------------------------------------------------------------
| r52704 | mcaroli | 2009-10-23 11:56:56 +0200 (Fri, 23 Oct 2009) | 2 lines
|
| add a phrase that precises that input points have to lie inside the cube
| ------------------------------------------------------------------------
........
r52843 | lrineau | 2009-11-02 14:28:09 +0100 (Mon, 02 Nov 2009) | 2 lines
g++-4.4 is supported as well.
........
r53002 | mcaroli | 2009-11-12 18:05:01 +0100 (Thu, 12 Nov 2009) | 3 lines
improved doc of periodic_point(v) and periodic_point(v,i)
this is a merge from the trunk, revision 53001
........
r53053 | stayeb | 2009-11-16 13:56:49 +0100 (Mon, 16 Nov 2009) | 5 lines
Merge r53048 from trunk
r53048 | stayeb
Fix syntax error.
........
r53152 | stayeb | 2009-11-24 13:43:03 +0100 (Tue, 24 Nov 2009) | 1 line
Fix bug (typo) in polyhedral domain initialization.
........
r53292 | lrineau | 2009-12-04 16:00:00 +0100 (Fri, 04 Dec 2009) | 1 line
commit revision 53291 from trunk to branch 3.5
........
r53293 | lrineau | 2009-12-04 16:01:30 +0100 (Fri, 04 Dec 2009) | 1 line
commit revision 53289\ from trunk to branch 3.5
........
r53294 | lrineau | 2009-12-04 16:02:06 +0100 (Fri, 04 Dec 2009) | 1 line
commit revision 53288 from trunk to branch 3.5
........
Things like "CGAL_assertion(denominator != 0)" produced assertion failures for no gain.
So now, the assertion is triggered only if the condition is certain, using CGAL::certainly().
That is, change the following in all assertion files :
((EX)?(static_cast<void>(0)): ::CGAL::assertion_fail( # EX , __FILE__, __LINE__))
to :
(CGAL::certainly(EX)?(static_cast<void>(0)): ::CGAL::assertion_fail( # EX , __FILE__, __LINE__))
as the default is now the empty string "".
It should fix the problem that we have lost the assertion messages
(seeing "what(): basic_string::_S_construct NULL not valid" instead),
for packages that use package-specific assertion macros.
- made partial pricing also work for high constraint/variable ratio (needs to
be properly tested)
- added QSCORPIO as interesting additional example
- switched to quotient output in iteration log to avoid nans
- removed filter_failure example (after all, this particular example
was just an artifact of the bad to_double() routine of Gmpzf that I
fixed earlier
- added remark about possible filter failures
- added example where they occur, and how to fix them
- added benchmark section
- ref manual:
- documented pricing strategies
- code:
- made partial_filtered_dantzig the default for double input
- added timer output to test_solver
- added QP_solution page (the fat one)
- added package description and image
- some minor revisions
- code:
- renamed some QP_solution methods to make them more accessible
- mps reader is now derived from a model that allows to set
up and manipulate a program entrywise
- old copying models removed
- free models removed (they are utterly useless)
- a() -> get_a() etc.
- the solver can now solve problems with no variables :-)
- manual:
- added maker pages
- adapted to above changes
- changed unbounded direction w so that x + tw is the unbounded ray
- aded certificate iterators to QP_solution
- added example programs that demonstrate the certificates
- fixed examples so that 2D instead of D is given
- added test with random small QP's
- fixed some bugs discovered by this:
- output routine for programs is now printing symmetric D
- internal comparison routine is now ignoring bound value if it
was specified as infinite
- fixed sign error in subrotuine of ratio_test
- removed constant term from consideration in phase I
- test (and fixed) access to upper-diagonal entries in D
- MPS read/write disagreement now only triggers warning (small differences
may be ok if floating point numbers are used)
QP data that are no longer available after the constructor call)
- fixed copying models to only copy entries of D on/below the diagonal
- fixed are_equal_qp function to only access entries of D on/below the diagonal
dynamically in the code. Reason: this tag is difficult to explain to
the user, does not have any effect on the interface, and is not very
costly to dispatch dynamically
- refactored QP_solver to separate the QP, the ET and the Tags
- got rid of MPS.h, MPS.C (integrated into QP_models)
- added QP_functions.h to test full rank of QP
- added QP_solver diagnostics for friends to access
- removed ET type from MPS reader (was only needed for rank test, and now
I'm using the new QP function for that -> faster and cleaner)
- made pricing of a single variable a method in base class QP_pricing_strategy
- added missing pricing strategy notification in enter_and_leave_variable()
- NAMEs with spaces
- RANGES
- RHS entry for objective row (means: constant term in obj func)
enhanced QP_solver. It can now handle a constant term in obj func
- in write_MPS, 0's are now omitted
- added routine to read floating-point number in decimal format from MPS
- fixed two bugs that didn't have any effect (yet)
- commented out some expensive checks / long outputs in example programs
* .C ---> .cpp
* removed ../examples from paths
* moved some demo/example files out of doc_tex into their respective place
* now it should build properly, again
and original_variables_value_iterator
- tested this new functionality as part of test_MPS.C
- adapted Trung's example to work with it and checked it in
Philipp Möller
Laurent Rineau
Andreas Fabri
Sébastien Loriot
Yves Brise
Sylvain Pion
Bernd Gärtner
Fernando Cacciola
Andreas Meyer
Joachim Reichel
Michael Hemmer
Laurent Saboret
Kaspar Fischer