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176 Commits

Author SHA1 Message Date
Mael Rouxel-Labbé b115a680bf Merge remote-tracking branch 'cgal/master' into P3M3-Undocumented_polyhedral_domain_example-GF 2022-12-06 09:47:46 +01:00
Mael 6538b22e06
Merge branch 'master' into CGAL-Clean_CMakeLists.txt-GF 2022-12-05 16:03:41 +01:00
Mael Rouxel-Labbé 7789d060fb Minor code cleaning 2022-11-29 12:14:31 +01:00
Mael Rouxel-Labbé cf2b3cb4f1 Add some named parameters to read_MEDIT 2022-11-29 12:13:57 +01:00
Mael Rouxel-Labbé 0ae5cc28f9 medit IO improvements 2022-11-25 16:37:09 +01:00
Mael Rouxel-Labbé b5c21e1f5d Http -> https + update some dead links 2022-11-23 18:54:37 +01:00
Mael Rouxel-Labbé b10b84fb7f Merge remote-tracking branch 'cgal/master' into P3M3-Undocumented_polyhedral_domain_example-GF 2022-11-18 16:47:07 +01:00
albert-github eed54a0ae5 spelling corrections 
Some spelling corrections (Directories starting with `O`-`S` , first part),
some backward work
some forward work
 2022-11-15 18:45:39 +01:00
albert-github 45478184de spelling corrections 
Some spelling corrections (Directories starting with `E`-` L`),
some backward work
some forward work
 2022-11-15 13:39:40 +01:00
Laurent Rineau 92d8d1c805 Merge remote-tracking branch 'cgal/master' into CGAL-allow_Epick_with_float-GF 
# Conflicts:
#	Mesh_3/test/Mesh_3/test_meshing_3D_image.cpp
 2022-11-08 12:11:06 +01:00
Laurent Rineau 8c9281f440 Merge pull request #6642 from sloriot/gsoc2022-boost_np 
Replace usage of Boost parameters with CGAL named function parameters
 2022-11-07 10:08:38 +01:00
Laurent Rineau d24b180293 Merge branch 'master' into gsoc2022-boost_np 2022-10-28 15:39:36 +02:00
Mael Rouxel-Labbé cb83e20ac7 Add a more generic check for non-manifoldness (it can be more than 4 inc cells) 2022-10-26 21:54:12 +02:00
Mael Rouxel-Labbé 9894286837 Fix returning failure if non-manifoldness is present but allowed 2022-10-26 21:53:40 +02:00
Mael Rouxel-Labbé 2a851b7ec4 Rename some variables / functions for clarity 2022-10-26 21:52:55 +02:00
Mael Rouxel-Labbé 3e2c8e0806 Fix debug messages not living behind a verbosity check 2022-10-26 21:50:42 +02:00
Mael Rouxel-Labbé ab360497ac Use a more generic way of getting the inf vertex position for clarity 2022-10-26 21:49:40 +02:00
Mael Rouxel-Labbé 41641086e0 Do not print "Error" if non-manifoldness is allowed 
And clarify when this can happen
 2022-10-26 21:49:31 +02:00
Mael Rouxel-Labbé 6852ad11ab Use emplace() / emplace_back() 2022-10-26 21:48:20 +02:00
Mael Rouxel-Labbé d30b5c1a7f Indentation fixes 2022-10-26 21:47:37 +02:00
Jane Tournois d279255f46 fix number type 2022-10-24 10:23:19 +02:00
Andreas Fabri c04dceb71d Merge master 2022-10-14 14:40:58 +01:00
Laurent Rineau bb62879a4f Merge pull request #6926 from janetournois/Polyhedron_demo-add_tetra_am_reader-jtournois 
Polyhedron demo - add C3T3 `.tetra.am` reader
 2022-10-13 15:17:44 +02:00
Jane Tournois 66d448158c fix indentation 2022-10-13 12:44:09 +02:00
Jane Tournois a79239fc44 fix indices in ascii reader 2022-10-04 16:28:41 +02:00
Jane Tournois 95a8ee1912 move function up, before use 2022-10-04 14:45:17 +02:00
Jane Tournois a9f4ee7342 reorganize headers to separate tetrahedral and surface meshes IO 2022-10-04 14:22:54 +02:00
Jane Tournois 1f005793b0 add missing license header 2022-10-04 09:33:20 +02:00
Jane Tournois 8a05e4df23 move header outside demo 2022-10-03 16:00:41 +02:00
Jane Tournois 53d8734ad2 add tetrahedral mesh .tetra.am reader in C3t3_io_plugin 2022-10-03 15:31:14 +02:00
Jane Tournois 33816fa798 add verbosity 2022-10-03 12:33:32 +02:00
Sébastien Loriot 54a6462273 move code so that we can reinject mesh_3 parameters functions into NFP class 2022-09-26 20:09:58 +02:00
Mael Rouxel-Labbé 363d1daaef Some more conversions to non-package specific assertions 2022-09-23 15:20:24 +02:00
Andreas Fabri d3fca65ae5 CGAL: No longer per package assertions 2022-09-23 12:49:40 +01:00
Laurent Rineau b2f661f2dc Fix dependencies 
For Periodic and SMDS_3, that is just the change of the order, using
the `C` locale (`export LC_ALL=C`).

For Weights and Shape_regularization... how come the file are missing?!
 2022-09-21 14:38:09 +02:00
Mael Rouxel-Labbé 6f187f332c Misc minor fixes/improvements 2022-09-14 14:08:23 +02:00
Mael Rouxel-Labbé 9b265fddf8 Uniformize REQUIRED / QUIET usage: 
Following this:
- CGAL: always REQUIRED
- CGAL component: COMPONENT / OPTIONAL_COMPONENT (never QUIET)
- required 3rd party: (not QUIET) + message(NOTICE "") on NOT_FOUND
- optional 3rd party: QUIET + message(STATUS "") except for Polyhedron/demo
- 3rd party components: COMPONENT / OPTIONAL_COMPONENT
                        (QUIET depending on required or optional 3rd party)
 2022-09-06 16:24:27 +02:00
GYuvanShankar a2ae9ea98f Fixed tests in SMDS_3 2022-08-23 15:11:49 +05:30
Sébastien Loriot ad6329c263 Merge 'cgal/master' into gsoc2022-boost_np 2022-08-16 17:52:18 +02:00
Sébastien Loriot 861588abe1 Merge 'sloriot/CGAL-std_type_traits' into master 2022-08-03 20:19:51 +02:00
albert-github 5b31fc4579 SMDS_3 Incorrect link 
We get the warning:
```
SMDS_3/include/CGAL/tetrahedron_soup_to_triangulation_3.h:210: warning: unable to resolve link to 'polygon_soup_to_polygon_mesh()' for \link command
```

see also:
- https://cgal.geometryfactory.com/CGAL/Manual_doxygen_test/CGAL-5.6-Ic-16/logs_master/SMDS_3.log
- https://github.com/CGAL/cgal/pull/6645
 2022-06-29 12:21:07 +02:00
Sébastien Loriot 05a6e2b150 workaround doxygen bugs 2022-06-20 10:57:50 +02:00
Sébastien Loriot fecc99535c fix typo 2022-06-20 10:04:44 +02:00
Jane Tournois 3656c632aa
Apply suggestions from Mael's code review 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:52:23 +02:00
Jane Tournois 55f853b9da
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:47:30 +02:00
Jane Tournois 15645e27a5
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:47:12 +02:00
Jane Tournois dc340f36fd
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:46:31 +02:00
Jane Tournois 0fbe473bc3
comma 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:46:07 +02:00
Jane Tournois 1efc36bf2a
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:45:19 +02:00
Jane Tournois b518ca1358
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:45:03 +02:00
Jane Tournois 477030b664
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:44:24 +02:00
Jane Tournois c50f323958
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:44:07 +02:00
Jane Tournois edcd0e5742
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:43:52 +02:00
Jane Tournois 42c1eb0496
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:43:31 +02:00
Jane Tournois c18c230947
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:43:08 +02:00
Jane Tournois de5298b820
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:30:04 +02:00
Jane Tournois 4e7535e16c
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:29:47 +02:00
Jane Tournois 2b4b30be8b
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:29:27 +02:00
Jane Tournois 2903333770
typo 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:28:53 +02:00
Jane Tournois 863dc0b5f0
add missing backticks 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:28:43 +02:00
Jane Tournois 8ac3417eb3
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:28:28 +02:00
Jane Tournois b1e2a0f127
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:28:17 +02:00
Jane Tournois 3ae3ce177b
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:27:59 +02:00
Jane Tournois dc9b081efd
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:27:46 +02:00
Jane Tournois 479c4c57e9
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:27:29 +02:00
Jane Tournois 56fff09944
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:27:16 +02:00
Jane Tournois 6e3ff0f408
doc 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-06-17 14:26:51 +02:00
Jane Tournois 2db4d016d7 rename graph->tmesh 2022-06-17 14:17:37 +02:00
Jane Tournois 6191ce57c0 typo 2022-06-17 14:15:19 +02:00
Jane Tournois 572f1b5deb doc uniformization 2022-06-17 14:13:24 +02:00
Jane Tournois e696d30a21 undocument output_to_maya 
only for the demo
 2022-06-17 14:10:16 +02:00
Jane Tournois 4ed3519dcf typo 2022-06-17 11:36:41 +02:00
Jane Tournois c8b623a612 add missing links 
they should be automatic, but not
 2022-06-17 11:34:31 +02:00
Jane Tournois 02bcb6d521 apply Andreas' review 2022-06-17 11:31:56 +02:00
Jane Tournois a2f6d76a91 however/whether 2022-06-17 10:14:49 +02:00
Jane Tournois 41fb6d5eb2 whether/however 2022-06-14 17:19:13 +02:00
Jane Tournois 96466d75d7 there are three files: 
a .node for the vertices,
a .ele for the cells, and
a .face for the triangles of the 2D complex.
 2022-06-14 17:17:57 +02:00
Jane Tournois 7b30c01ff3 apply Laurent's review 2022-06-14 15:53:09 +02:00
Jane Tournois 7247b65fac fix doc 2022-06-10 17:54:36 +02:00
Sébastien Loriot b0c7bd92bc update image paths 2022-06-08 23:25:54 +02:00
Sébastien Loriot 6374b664ad clean up doxyfile 2022-06-08 23:25:54 +02:00
Sébastien Loriot 51f08d1dbc use default for the functions 2022-06-08 23:25:54 +02:00
Jane Tournois b507b59d8a add default time stamps 2022-06-08 23:25:54 +02:00
Jane Tournois 811500529e P3T3 does not have range iterators 2022-06-08 23:25:54 +02:00
Jane Tournois 0800ae3dd8 (re) Port Mesh_3 to oneAPI-TBB 
partially cherry-pick f8a2878b0c
that was lost in a bad merge conflict resolution
 2022-06-08 23:25:54 +02:00
Jane Tournois 127c892e94 fix unused variable warning 2022-06-08 23:25:54 +02:00
Sébastien Loriot eb59a75e7a fix compilation warnings and error 2022-06-08 23:25:54 +02:00
Jane Tournois c16e77ab47 remove unused typedef 2022-06-08 23:25:53 +02:00
Jane Tournois 8e1cb89989 move test data to SMDS_3 2022-06-08 23:25:53 +02:00
Sébastien Loriot 2e7e6341dd update tests 2022-06-08 23:24:25 +02:00
Jane Tournois 0027343a11 typo 2022-06-08 23:03:58 +02:00
Jane Tournois 2b76e2a555 doc 2022-06-08 23:03:58 +02:00
Jane Tournois bc75d1457a fix input path 2022-06-08 23:03:57 +02:00
Jane Tournois b36a99a519 update test and input file with 0 subdomain for outside cells 2022-06-08 23:03:57 +02:00
Jane Tournois 8814eb88d2 the outside cells must have default-constructed Subdomain_index(), i.e. 0 in MEDIT files 2022-06-08 23:03:50 +02:00
Jane Tournois fce4086c72 remove unused first_index variable 2022-06-08 23:03:50 +02:00
Jane Tournois c92d8ec3f6 fix and document write_MEDIT 
it would not work for non-topological spheres to write/load a mesh
with `all_cells = false`
 2022-06-08 23:03:50 +02:00
Jane Tournois d7759abbb7 add a hidden parameter to allow non-manifold vertices or edges 
this is to be used only is advanced code that deals with invalid T3
 2022-06-08 23:03:50 +02:00
Jane Tournois 74d376cf09 convert each input point to Tr::Point 2022-06-08 23:03:50 +02:00
Jane Tournois 0ab5a5b6e9 the requirement only is to be convertible into a Tr::Point 
not to be the same
 2022-06-08 23:03:50 +02:00