Due to an incompatibility change in doxygen (see 2a62c19755 (commitcomment-150534822)) it is necessary to add the setting for `FULL_SIDEBAR` to the setup of the CGAL documentation.
Correction of incorrect usage of LaTeX in formulas and bibliography altough MatHJax and bibtex.pl doesn't always signal it.
- Incorrect biblio entry (missing `,` and `}`)
- Documentation/doc/biblio/geom.bib
- ` ` is not correct LaTex has to be `~`
- Arrangement_on_surface_2/doc/Arrangement_on_surface_2/Arrangement_on_surface_2.txt
- Documentation/doc/Documentation/Developer_manual/Chapter_intro.txt
- Incorrect formula regarding usage of `\left` and `\right` (also signaled by MathJax
- Arrangement_on_surface_2/doc/Arrangement_on_surface_2/Arrangement_on_surface_2.txt
- `DeclareMathOperator` is a command that should be in the preamble, alternatively the command `\operatorname` can be used explicitly (as done here as it is only used once)
- Kinetic_surface_reconstruction/doc/Kinetic_surface_reconstruction/Kinetic_surface_reconstruction.txt
- Latex has problems with `_` in a `text...` command so it should be escaped though this gives problems with MathJax hence the extra hook.
MathJax reference: https://groups.google.com/g/mathjax-users/c/wSh6-hSIUpQ/m/KmzZhQQGslgJ
- Documentation/doc/resources/1.10.0/CGAL_mathjax.js
- Documentation/doc/resources/1.8.13/CGAL_mathjax.js
- Documentation/doc/resources/1.9.6/CGAL_mathjax.js
- Weights/include/CGAL/Weights/authalic_weights.h
In the header files it was mentioned:
```
<!-- This should probably be an extrastylesheet instead of hardcoded. -->
<link href="$relpath$../Manual/cgal_stylesheet.css" rel="stylesheet" type="text/css" />
$extrastylesheet
```
this is now effectuated with this PR.
The PR #7946 was withdraw because the `$cookie` was not necessary anymore in the `header...` files as it was part of the of the `$treeview`.
In `header_package.html` the `$treeview` has been disables and as such the `cookie.js` is not added/
Adding the `cookie.js` explicitly.
The effect was that there was a divider between the treeniew and the textual documentation but it was on the far left (and thus invisible), ith could be moved but after a refresh it was "gone" again.
Adding the, new, possibility for `HTML_COPY_CLIPBOARD`:
> If the `HTML_COPY_CLIPBOARD` tag is set to `YES` then doxygen will show an icon
> the top right of code and text fragments that allows the user to copy the contents to the clipboard (provided
> this is supported by the browser).
Doxygen master 1.10.0 has support for the c++ concept of modules but as in the past doxygen used the term "modules" for the grouping of information (`commands like `\defgroup`, `\ingroup` etc.) an new term for the later has been introduced: Topics.
The introduction of the new term also has some influence on the generated files and file names.
The consequence of this is that part of CGAL documentation (i.e. the "Reference Manual") item didn't appear anymore in a.o. the treeview.
- creating a new setup
- adding the "topics" to the layout files as in the past the "modules" were.
- adjusting the "hack.js" where some manipulation of the TreeView is done and this had "modules" coded into it.
- adjusting the "header_packages.html" as this used the name "modules.js"
Sébastien Loriot
albert-github
Laurent Rineau