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Author SHA1 Message Date
Clement Jamin 89c4e4a8b8 Remove duplicated code 2017-04-27 10:15:36 +02:00
Andreas Fabri c81b707bfb Do not include graph_traits_{Polyhedron | Surface_mesh}.h 2017-04-24 19:17:43 +02:00
Clement Jamin 7750f85867 WIP: Use a cache storing contiguously the coordinates of all points 
Note: not backward-compatible, and not useful for all cases
 2017-04-24 17:04:48 +02:00
Clement Jamin 6a5dbdc333 Add new variants of transformed_distance 
- Variant taking iterators on coordinates of P instead of P itself
- Variant with an additional param `stop_if_geq_to_this`: during the computation,
  if the partially-computed distance `pcd` gets greater or equal
  to `stop_if_geq_to_this`, the computation is stopped and `pcd` is returned.
 2017-04-24 16:52:55 +02:00
Laurent Rineau 909e393e61 Merge pull request #1808 from MaelRL/Spatial_searching-Fix_fuzzy_query_item_border 
Spatial searching: Fix fuzzy query items
 2017-01-30 09:54:55 +01:00
Sébastien Loriot 50510c05ea add include directive for license of all GPL header files 
done using:
ack-grep "^GPL" */package_info/*/license.txt -l | awk -F "/" '{print $1}' > /tmp/gpl_packages
for i in `cat /tmp/gpl_packages | \
          grep -v Operations_on_polyhedra | \
          grep -v Algebraic_kernel_for_circles | \
          grep -v Algebraic_kernel_for_spheres | \
          grep -v Polyhedron_IO`;
do
  echo $i
  python Scripts/developer_scripts/add_license_in_pkg_header.py $i
done
python Scripts/developer_scripts/add_license_in_pkg_header.py Operations_on_polyhedra Polygon_mesh_processing
python Scripts/developer_scripts/add_license_in_pkg_header.py Algebraic_kernel_for_circles Circular_kernel_2
python Scripts/developer_scripts/add_license_in_pkg_header.py Algebraic_kernel_for_spheres Circular_kernel_3
python Scripts/developer_scripts/add_license_in_pkg_header.py Polyhedron_IO Polyhedron
 2017-01-19 15:20:25 +01:00
Marc Glisse cfd4e92153 Use extended Kd_tree information also for search / search_any_point. 
Note that we don't want to use set_upper_bound, because it calls
set_max_span, which the current split already avoids.
Also fix Kd_tree_rectangle::lower() with fixed dimension.
 2017-01-13 02:11:40 +01:00
Mael Rouxel-Labbé 2d3daa5f58 Doc changes 2017-01-09 22:52:56 +01:00
Mael Rouxel-Labbé fe8f36bcac Trailing whitespace in Spatial searching 2017-01-09 17:46:47 +01:00
Mael Rouxel-Labbé e64f271451 Updated the documentation of Fuzzy Query Items 2017-01-09 17:43:53 +01:00
Mael Rouxel-Labbé affece6748 Renaming away 'exact' and minor changes 2017-01-09 17:36:04 +01:00
Mael Rouxel-Labbé 991874b81d Renamed range for clarity 2017-01-09 16:29:41 +01:00
Mael Rouxel-Labbé b9914b0a9f Updated the circular_query example 
-- Made it clearer that choosing epsilon=0 does not mean one get all the points
within a disk
-- Changed the values for center / fuzziness
 2017-01-09 15:13:32 +01:00
Mael Rouxel-Labbé 577a335aae Fixed inequalities in Circular_query.cpp 2017-01-09 14:40:40 +01:00
Mael Rouxel-Labbé cd89288d46 Revert "Fix a bug in Spatial_searching's fuzzy_iso_box" 
This reverts commit 5ed7255adb.
 2017-01-09 12:14:03 +01:00
Mael Rouxel-Labbé dcdfc4b95d Revert "Spatial_searching: bug reported and fixed by Marc Glisse" 
This reverts commit ed526b8f22.
 2017-01-09 12:14:00 +01:00
Mael Rouxel-Labbé 9491a9a0cf Revert "Fix a bug in Spatial_searching's fuzzy_sphere" 
This reverts commit c0cbdab3d8.
 2017-01-09 12:13:12 +01:00
Maxime Gimeno 06dd4a4522 Add a geom-traits concept for distance functions 
Update the code and the doc accordingly
 2016-12-29 07:20:23 +01:00
Marc Glisse 482b0bc073 Store weights of Weighted_Minkowski_distance in an array if dimension is known. 
This gains 15% on the running time of a real application in 2D.
 2016-12-13 00:33:33 +01:00
Marc Glisse e45cb3961b Remove undocumented and unused constructor of Weighted_Minkowski_distance. 2016-12-13 00:29:16 +01:00
Marc Glisse 1c4554da08 Remove dead call to resize(). 2016-12-12 23:54:58 +01:00
Marc Glisse f64f7fbf1a Unused parameter in release mode. 2016-12-12 23:30:52 +01:00
Laurent Rineau c99f0366a8 Merge remote-tracking branch 'cgal/releases/CGAL-4.9-branch' 2016-12-12 17:47:56 +01:00
Andreas Fabri ed526b8f22 Spatial_searching: bug reported and fixed by Marc Glisse 2016-12-04 11:26:50 +01:00
Marc Glisse 790ca3f05f Remove redundant call to std::copy. 2016-11-27 19:07:52 +01:00
Marc Glisse f7741b1f2b Confusion between the 2 islower flags. Ordering issue on setting / clearing removed_ flag. 2016-11-25 17:19:03 +01:00
Marc Glisse 7bdb83a4e1 Very minimal test for Kd_tree::remove. 2016-11-25 15:34:18 +01:00
Marc Glisse d1b461350b Incomplete renaming in last changes... 2016-11-25 15:29:47 +01:00
Marc Glisse 36af1c17f4 Let remove() take a functor as argument. 2016-10-27 23:17:42 +02:00
Marc Glisse 158c77dc8b Document invalidate_built. 
And detail the interactions between insertions and removals.
 2016-10-27 22:33:16 +02:00
Sébastien Loriot 96c1d4c45b remove a non needed requirement from concepts 
Kernel_traits was needed for the random generator in the examples/tests
 2016-10-27 09:41:44 +02:00
Marc Glisse df573404d0 Merge branch 'Spatial_searching-misc-glisse-old' into Spatial_searching-misc-glisse 2016-10-26 11:12:04 +02:00
Marc Glisse 3038832982 Handle insert-after-remove in Kd_tree. 
Untested.
 2016-10-26 11:02:41 +02:00
Andreas Fabri 64a901a863 Add the documentation for Kd_tree::build() and unify it with AABB_tree::build. 
The latter was in a Section 'Advanced' (not \cgalAdvanced, just a \heading).
They are now both in the Section `Creation`.
 2016-10-13 10:07:48 +02:00
Laurent Rineau 223c1cf5a4 Merge pull request #1530 from lrineau/Installation-compute_dependencies-GF 
Compute and fix packages dependencies
 2016-10-05 13:11:04 +02:00
Laurent Rineau 51f5697d3d Add missing #include 2016-09-30 15:23:14 +02:00
Clement Jamin fa6ecf39be Merge branch 'Triangulation-add_regular_tri-cjamin_mglisse-old' into Triangulation-add_regular_tri-cjamin_mglisse 2016-09-09 12:55:43 +02:00
Sébastien Loriot 7e2ee496de update project name of cmake scripts of tests 2016-09-08 00:26:37 +02:00
Sébastien Loriot 6b338eeb1f improve the name of projects in cmake scripts of examples 2016-09-08 00:02:55 +02:00
Laurent Rineau c8ad04550e Merge pull request #1325 from sgiraudot/Spatial_searching-Fix_misleading_examples-GF 
Spatial searching: fix misleading typedef in examples
 2016-08-29 12:30:04 +02:00
Marc Glisse a1c231737b Rewrite to handle points on the boundary that may be on either side. 2016-08-25 19:39:58 +02:00
Jane Tournois 47a5606eea this commit fixes the following issue : 
<<The AABB_tree<AT> internally use the spatial searching and in particular instantiates Search_traits_3 with AT. This implies according to that page that the concept AABBTraits must be a Kernel.

A clean solution is adding a new concept in Spatial searching that describes requirements of the template parameter of Search_traits_3. Then we can say that AABBTraits refines this concept. For consistency, we do the same for the template parameter of Search_traits_2.
>>
 2016-08-23 16:28:50 +02:00
Simon Giraudot bd4c94af53 Fix misleading typedef in examples 2016-08-02 12:44:47 +02:00
Clement Jamin 88b86f96f4 Add concept/model relationship 2016-07-29 12:06:01 +02:00
Marc Glisse 98c7108630 Typo Construct_squared_radius_d 
The code is using Compute_* and the doc Construct_*, change the doc.
 2016-07-07 18:57:32 +02:00
Clement Jamin 5e03101540 Add concept/model relationship 2016-07-06 11:06:26 +02:00
Guillaume Damiand a8af4dad62 Merge branch 'CGAL_headers_only_step1-gdamiand_cjamin-old' into CGAL_headers_only_step1-gdamiand_cjamin 2016-06-22 09:43:31 +02:00
Sébastien Loriot 6326ea2372 Merge remote-tracking branch 'cgal/releases/CGAL-4.8-branch' 2016-06-16 16:19:04 +02:00
Sébastien Loriot 94828c1eaa add missing const 2016-06-15 17:35:05 +02:00
Sébastien Loriot 7677241b7f replace static_cast and add missing const 2016-06-14 15:06:37 +02:00
Sébastien Loriot 31d2638b47 force usage of the base class function 2016-06-14 08:42:30 +02:00
Guillaume Damiand a53f16edac Merge branch 'CGAL_headers_only_step1-gdamiand_cjamin-old' into CGAL_headers_only_step1-gdamiand_cjamin 2016-06-09 19:09:38 +02:00
Sébastien Loriot 013c25c889 Merge remote-tracking branch 'cgal/releases/CGAL-4.8-branch' 2016-06-08 14:11:28 +02:00
Sébastien Loriot 6ec27d359e fix furthest orthogonal incremental neighbor 
previously the current distance was always larger than the initial
one. As a result no branch of the tree could be filtered out and
all the nodes were visited.
 2016-06-06 14:41:33 +02:00
Sébastien Loriot ccaa1729ca improve test to cover both Orthogonal & classic incremental neighbor search 
Also ensure that the result are good
 2016-06-03 16:41:00 +02:00
Sébastien Loriot 849c097cfd A possible fix for further neighbor search 
if we want to keep using tigh bbox we need more double per node
 2016-06-03 16:40:13 +02:00
Clement Jamin b92138cde5 Add a comment about the two new operators 2016-06-01 14:17:29 +02:00
Clement Jamin cd6cd2918b Add explicit forwarder to the Base_traits 2016-06-01 14:17:27 +02:00
Clement Jamin 95ab3b1402 Remove the using and call the base's operator() explicitly 2016-06-01 14:17:26 +02:00
Sébastien Loriot ebe067191e test takes errors into account for the exit code 2016-05-25 11:51:15 +02:00
Guillaume Damiand 10469f9c4e Update with master 2016-05-25 10:58:55 +02:00
Marc Glisse 6815316c9f Let it compile... 2016-04-10 15:23:24 +02:00
Marc Glisse d9d1c79f28 Point removal in kd-tree. 2016-04-07 16:05:21 +02:00
Frédérik Paradis 418c11ec7e Adding typedef for Sphere_d in Search_traits_d to respect the contract of RangeSearchTraits 2016-04-02 10:51:19 -04:00
Marc Glisse c527ab2c5c Don't uselessly repeat the template parameters inside the class. 2016-03-25 21:49:19 +01:00
Marc Glisse 667ca8f417 Compact Kd_tree_rectangle a bit in the dynamic case. 2016-03-25 21:17:37 +01:00
Marc Glisse f5e9aa8941 Use upper() and lower() in Kd_tree_rectangle. 2016-03-25 15:41:14 +01:00
Marc Glisse 7438d46087 Remove low_value/high_value that don't apply to the non-extended Kd_tree_internal_node. 2016-03-25 15:27:34 +01:00
Marc Glisse 54135a8ca5 Reorder fields in Kd_tree_rectangle for compactness. 2016-03-25 15:18:41 +01:00
Marc Glisse 475154e6af Stop once we've found a point in search_any_point 
I am not familiar with this code, please double-check that the change makes sense.
 2016-03-24 23:17:40 +01:00
Sébastien Loriot 4c29bf1b44 CMAKE_SOURCE_DIR -> CMAKE_CURRENT_SOURCE_DIR 2016-03-24 16:33:46 +01:00
Clement Jamin 9a61b23b55 Use get_default_random() instead of default_random 2016-03-09 10:35:21 +01:00
Sébastien Loriot 881e4d3199 request Core only in examples, tests and demos when really needed 2016-03-07 22:36:57 +01:00
Sébastien Loriot 2d191d6651 commit CMakeLists.txt for all examples and tests 2016-03-07 17:39:36 +01:00
Sébastien Loriot 45406a5296 Merge pull request #788 from bo0ts/Installation-split_config-pmoeller 
Split CGALConfig.cmake and CGALExports.cmake
 2016-03-06 15:36:55 +01:00
Philipp Möller 4211a4f01e Globally remove CMAKE_ALLOW_LOOSE_LOOP_CONSTRUCTS 
This is a Cmake 2.4.3 variable that isn't even documented anymore.
 2016-02-16 17:02:55 +01:00
Philipp Möller 0a04a3a48f Use CGAL_DOC_VERSION 2016-02-11 15:37:54 +01:00
Simon Giraudot 751d959c05 Fix boost unused typedef warning: replace BOOST_STATIC_ASSERT by CGAL_static_assertion 2016-02-02 14:32:46 +01:00
Sebastien Loriot 32a3972c33 Merge pull request #592 from afabri/CGAL-dont_submit_cleanup-GF 
Towards getting rid of dont_submit files
 2016-01-08 14:14:08 +01:00
Sébastien Loriot e64ae35a6e Merge pull request #542 from bo0ts/Documentation-release_build2-pmoeller 
Allow to build the documentation in a release
 2016-01-07 09:21:46 +01:00
Andreas Fabri a41165b6eb various 2016-01-05 18:04:14 +01:00
Andreas Fabri e7d3bd96f2 Remove Kd_tree_d_new.h 2015-12-31 16:47:20 +01:00
Philipp Möller 71b4e9c515 Use CGAL_FULL_VERSION in all Doxyfile.in 2015-12-17 16:33:28 +01:00
Philipp Möller 81a8f982dc Handle the easy INPUT cases 
If INPUT is just PKG/doc/PKG, handle it automatically.
 2015-12-10 17:00:26 +01:00
Andreas Fabri 6b2c4dd7c6 Merge branch 'CGLAL-thread_local_storage-GF-old' into CGLAL-thread_local_storage-GF 2015-11-09 14:26:42 +01:00
Sebastien Loriot 2e493f297b Merge pull request #389 from afabri/CGAL-Qt3-GF 
Remove Qt3 based demos
 2015-10-23 17:08:49 +02:00
Sebastien Loriot 40da918aaf Merge pull request #368 from afabri/Spatial_searching-find_any_point-GF 
Add function Kd_tree::find_any_point(Query)
 2015-10-10 14:24:22 +02:00
Sebastien Loriot fc66538d74 Merge pull request #380 from janetournois/Spatial_searching-fix_fuzzy_sphere_constructor-jtournois 
Spatial_searching : fix Fuzzy_sphere constructors
 2015-10-07 15:49:54 +02:00
Jane Tournois e116f4ea63 fix unused variable warning 2015-10-06 14:16:30 +02:00
Jane Tournois 69468219e4 update include of enable_if to location compatible with older versions of boost 2015-10-02 11:02:09 +02:00
Jane Tournois 3b506683c4 add an example where the previous commit is tested/shown 2015-10-01 16:18:04 +02:00
Jane Tournois 9491fac7a4 update include 2015-10-01 15:58:54 +02:00
Jane Tournois 58e44a5f1f avoid redundancy of constructors (compilation error) when types are the same 2015-10-01 12:15:45 +02:00
Andreas Fabri 1a4faa8575 Merge branch 'CGLAL-thread_local_storage-GF-old' into CGLAL-thread_local_storage-GF 2015-10-01 10:03:04 +02:00
Andreas Fabri 6e214c5f4a remove Qt3 demos and empty dontsubmit files 2015-09-30 12:51:40 +02:00
Andreas Fabri 34099dfe3a replace pair<Point,bool> wiyh optional<Point> 2015-09-26 10:42:27 +02:00
Sébastien Loriot 06704ceaee fix a typo 2015-09-24 13:55:57 +02:00
Sébastien Loriot a5dfe6743b make (Orthogonal_)incremental_nearest_neighbor a valid range 2015-09-24 08:21:05 +02:00
Andreas Fabri 482ea27103 Add Kd_tree.search_any_point(Point_d,FuzzyQueryItem) 2015-09-23 11:17:58 +02:00
Andreas Fabri 46b156a955 Update Spatial_searching.txt 
typo (whitespace)
 2015-09-09 16:29:00 +02:00
Andreas Fabri c3ad989c9f Use wrapper for the very basic mutex locking 2015-09-04 09:46:51 +02:00
Sébastien Loriot 6cb766fc9e Merge remote-tracking branch 'cgal-dev/Scale_space-bench-GF' 
improve the performances of the Scale-space reconstruction package

Tested in CGAL-4.7-Ic-102
 2015-07-31 14:45:17 +02:00
Sébastien Loriot e393f1488d remove commited CMakeList 2015-07-31 14:41:18 +02:00
Andreas Fabri 804b61f59b remove file that was accidentally added 2015-07-16 10:20:27 +02:00
Laurent Rineau f9917c487e CMake 2.8.11 2015-07-13 12:36:43 +02:00
Sébastien Loriot 722abba27b cosmetic changes to remove mentions of QT4 2015-07-07 18:00:43 +02:00
Andreas Fabri 728b4a2f5f Replace incremental search with a range query and a k-neighbor search 2015-06-23 14:59:50 +02:00
Sébastien Loriot 4494fe089f add missing typedef in the doc 2015-05-19 11:42:13 +02:00
Laurent Rineau 15aef699ad Re-add /wd4244 under Windows 2015-03-09 16:58:32 +01:00
Andreas Fabri bd0c90d198 use \tparam; polish of examples 2015-02-27 11:47:59 +01:00
Andreas Fabri af84e62b6c Use the Epick_d kernel in two examples, and for 4d and not 2D 2015-02-26 18:08:26 +01:00
Andreas Fabri 803415f2f1 make sure that the begin/end coordinate iterator are for the same point 2015-02-26 18:08:25 +01:00
Andreas Fabri 63945bdac9 fix links. They went into the dD kernel 2015-02-10 10:50:50 +01:00
Andreas Fabri 2cf40cafab Search_traits is not a model of RangeSearchTraits 2015-02-10 10:33:40 +01:00
Andreas Fabri d6af92ced2 cleanup in the ref manal 2015-02-10 10:02:11 +01:00
Andreas Fabri 567a557930 fix links 2015-01-29 10:04:03 +01:00
Andreas Fabri 520e47fc16 Add a tiny data set 2015-01-27 11:11:02 +01:00
Andreas Fabri c0286ce026 Add examples to search the closest vertices of a polygonal mesh 2015-01-27 10:51:48 +01:00
Sébastien Loriot 8637097561 Merge remote-tracking branch 'origin/Spatial_searching-fixes_for_4.6-GF' 
Tested in CGAL-4.6-Ic-113
  Approved by the RM
 2015-01-26 17:05:31 +01:00
Andreas Fabri d444701fa0 Add that Kd_tree::begin(0/end() is not in the insertion order 2015-01-20 10:40:10 +01:00
Andreas Fabri 2694a6faf5 Do not #include Memory_size.h as it includes windows.h with nasty #defines 
It was introduced for Kd_tree::statistics(0 by Markus
 2015-01-16 08:48:13 +01:00
Laurent Rineau 59a7f710dd Merge branch 'Spatial_searching-final_acceleration-gf' 
Improve the performance of Spatial Searching.

Small features:

  https://cgal.geometryfactory.com/CGAL/Members/wiki/Features/Small_Features/Spatial_searching_performance_optimization

  https://cgal.geometryfactory.com/CGAL/Members/wiki/Features/Small_Features/spatial_searching_compiletimeD

Approved by the Release Manager

Conflicts:
	Installation/changes.html
 2015-01-15 15:31:35 +01:00
Laurent Rineau 018919bc3b Remove an unused header file 2015-01-15 15:26:38 +01:00
Andreas Fabri c2edcbc1ba Kd_tree::search now returns the correct iterator 2015-01-14 14:58:35 +01:00
Andreas Fabri cbaece6134 qualify get<0>(..) 2015-01-10 06:22:51 +01:00
Andreas Fabri 5adf8e388c Workaround for boost::container::deque; 1 bug fix 2015-01-09 10:23:32 +01:00
Sébastien Loriot d3fb97b74b factorise the checking for the nested type Dimension 2015-01-09 10:19:48 +01:00
Andreas Fabri 275e4ba47b remove modefBegin/End 2015-01-08 15:58:36 +01:00
Andreas Fabri af3315aa5f cleanup 2015-01-08 11:36:08 +01:00
Andreas Fabri 1e1dce2d57 use Dimension_tag 2015-01-08 11:35:58 +01:00
Andreas Fabri 6c38bf7f08 use \@ in a .txt file as @ is a special character for doxygen 2015-01-08 10:43:29 +01:00
Andreas Fabri 2dcecc137e remove extra ';' after a macro 2015-01-08 09:51:33 +01:00
Andreas Fabri be5bff77e3 use boost::uint 2015-01-08 09:12:22 +01:00
Andreas Fabri cb5b17f873 chmod -x 2015-01-07 18:55:19 +01:00
Andreas Fabri 6e7c29e767 chmod -x 2015-01-07 18:55:18 +01:00
Andreas Fabri 78bd64cc9c lowercase file names 2015-01-07 18:55:16 +01:00
Andreas Fabri fba3da1d78 chmod -x 2015-01-07 18:55:13 +01:00
Laurent Rineau bec963af35 Add a license header 2015-01-07 18:27:04 +01:00
Andreas Fabri eb6146e0dc no need for passing the vector dists through the recursive function 2015-01-07 17:44:58 +01:00
Andreas Fabri 066df11cef remove unused parameter 2015-01-07 14:01:18 +01:00
Andreas Fabri b4c997dd7c remove unused parameter 2015-01-07 13:14:14 +01:00
Andreas Fabri 8d86f77cbc remove unused parameters; int -> ptrdiff_t 2015-01-07 12:05:53 +01:00
Andreas Fabri a77205a33c disable warning with push/pop macros around boost header 2014-12-16 17:13:30 +01:00
m.overtheil 65d363408c Fixed two old benchmarks 2014-12-16 13:20:20 +01:00
m.overtheil 61f642bde6 Changed order of nodes in deque 
Fixed example with user defined point.
Fixed weighted minkowski distance.
 2014-12-16 11:49:15 +01:00
m.overtheil 5b72551a41 Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-15 15:07:02 +01:00
m.overtheil f375123e69 Added figure of orthogonal distance 2014-12-15 15:06:25 +01:00
Laurent Rineau ffca6da15d Fix compilation on Linux 2014-12-15 13:41:49 +01:00
m.overtheil 1e8ca0eb79 Added statistics 2014-12-15 08:55:15 +01:00
m.overtheil eb55c71236 Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-12 15:35:09 +01:00
m.overtheil 967053e3c7 Added example for orthogonal search with a sphere 
Fixed wrong splitter in benchmark
 2014-12-12 15:33:45 +01:00
Andreas Fabri c98ca70df2 make it generic 2014-12-12 12:03:14 +01:00
m.overtheil 11a98dbc95 Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-12 10:26:20 +01:00
m.overtheil df6cd26804 Replaced std::container with boost container 
Also changed stored ints to uint32_t
 2014-12-12 10:24:56 +01:00
Andreas Fabri 6adece5ee9 also benchmark bost:container::deque 2014-12-12 09:45:17 +01:00
Andreas Fabri 1bc624ee30 Add a container 2014-12-11 20:33:53 +01:00
m.overtheil ddf4b932b0 Replaced separator for better memory alignment 2014-12-11 15:56:26 +01:00
Andreas Fabri 5e7deafb5f Add sizeof.cpp 2014-12-11 15:00:29 +01:00
m.overtheil 799de1db05 Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-11 10:09:58 +01:00
m.overtheil ffeabb441d Updated changes.html 2014-12-11 10:09:45 +01:00
Andreas Fabri ad0fa23571 Add a specialization to save memory in the case of general search 2014-12-11 10:03:01 +01:00
Andreas Fabri d711ae3968 Add more to \modif 2014-12-11 09:54:36 +01:00
m.overtheil 6b28c7df6d Pointed out what orthogonal search is 2014-12-11 08:44:42 +01:00
m.overtheil 5602747894 Merge branch 'incremental' into Spatial_searching-final_acceleration-gf 2014-12-10 11:28:42 +01:00
m.overtheil 9eab8bccf4 Changed description of vector dists, restructured user manual 2014-12-10 10:18:48 +01:00
m.overtheil 93e11cfeb4 Divided search in nearest and furthest 2014-12-09 15:35:16 +01:00
m.overtheil 23f87a839d Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-09 12:51:21 +01:00
m.overtheil 09878d56f0 typos in doc 2014-12-09 12:51:05 +01:00
Andreas Fabri a0ccf4aa7a Add benchmark 2014-12-09 12:43:06 +01:00
m.overtheil 0dd696c045 Added Modif's to doc 2014-12-09 11:34:15 +01:00
m.overtheil f801015712 Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-09 10:18:04 +01:00
m.overtheil bf7f340e61 Added loop to benchmark, slightly changed doc 2014-12-09 10:15:16 +01:00
Andreas Fabri c775be2506 typos in the user manual 2014-12-08 16:57:44 +01:00
m.overtheil eecc4b480e Fixed deleted double indirection 2014-12-08 15:37:23 +01:00
m.overtheil 53aecd416f Deleted double indirection 2014-12-08 12:10:52 +01:00
m.overtheil 418642d2a1 Typo 2014-12-08 10:59:46 +01:00
m.overtheil 76cb978a13 Added Figures,benchmark and implementation History 2014-12-08 09:38:20 +01:00
Andreas Fabri df2a957fbe add illustration gfor benchmark 2014-12-05 16:28:34 +01:00
m.overtheil 395b6a6d80 Test worst dist again 2014-12-05 16:17:17 +01:00
m.overtheil 286e957e4f Modification of new example 2014-12-05 15:43:49 +01:00
m.overtheil 7fe5f7c9ae Fixed most of the old benchmarks 2014-12-05 14:36:46 +01:00
m.overtheil 2a71befeaa Added example for splitter worst cases 2014-12-05 12:21:16 +01:00
Markus Overtheil 6c548a9fad Removed worst dist check 2014-12-05 09:12:05 +01:00
m.overtheil 1e6b69ccd9 Added tparam to doc 2014-12-04 15:58:03 +01:00
m.overtheil d9a132b72e Unrolled orthogonal distance loops for DIM 2 and 3 2014-12-04 14:32:53 +01:00
Andreas Fabri 417f47c06c dispatching for dimensions in orer to unroll 2014-12-04 13:17:00 +01:00
m.overtheil 060c4f208f Removed some output in bench 2014-12-04 12:17:21 +01:00
m.overtheil e893bc94d3 Check worst dist before make_pair 2014-12-04 11:46:10 +01:00
m.overtheil 16dbdf2f9b Merge branch 'Spatial_searching-final_acceleration-gf' of ssh://scm.cgal.org/var/git/cgal-gsoc into Spatial_searching-final_acceleration-gf 2014-12-04 10:14:55 +01:00
m.overtheil 78f257ec46 Added nanoflan benchmark 2014-12-04 10:12:09 +01:00
Andreas Fabri 9c7ab7568c typos and partial switching to \tparam 2014-12-04 10:07:52 +01:00
Andreas Fabri 9650d226a1 typos and partial switching to \tparam 2014-12-04 09:52:01 +01:00
Laurent Rineau 791ded9f35 Fix indentation 2014-12-03 16:20:28 +01:00
Laurent Rineau dfeb7d7b44 Fix compilation error: need a typedef for base class 2014-12-03 16:20:28 +01:00
Laurent Rineau 8258187d47 Fix compilation error: missing "typename" 2014-12-03 16:20:22 +01:00
Laurent Rineau f8911c20dd Fix compilation error: spurious "typename" 2014-12-03 16:15:52 +01:00
Laurent Rineau d20eb45039 Fix compilation error: "<CGAL\Dimension.h>" 2014-12-03 16:15:52 +01:00
m.overtheil 10249fb7f9 Bug in print() 2014-12-03 15:44:14 +01:00
m.overtheil 88dca7f9af Typo 2014-12-03 15:09:28 +01:00
m.overtheil 17068ae8b4 Documentation 2014-12-03 14:55:20 +01:00
m.overtheil a031dedd83 Fixed bug in print() 2014-12-03 12:23:25 +01:00
m.overtheil b08583e319 Specialized compute_neighbors_orthogonally 
It's now compute_nearest_neighbor_orthogonally and
compute_furthest_neighbor_orthogonally
 2014-12-03 10:47:52 +01:00
m.overtheil 4bf11c0edc replaced .assign() with .fill() 2014-12-02 16:04:20 +01:00
m.overtheil 9b3d496572 Added changes from Orthogonal search to Orthogonal inc search 2014-12-02 15:39:41 +01:00
m.overtheil af343d926e Added new traversal rule and dists vector to Orthogonal search 
Functions min_dist_to_rectangle and max... have an overload with
std::vector<FT>& dists now. That is required for ortho searches, so
we have no backwards compatibility.
The values for extended internal nodes have also been changed.
 2014-12-02 10:36:36 +01:00
m.overtheil e6019889cc Added dimension tags to Kd_tree_rectangle 
Introduced dimension tags for a speedup when we know the dimension
at compiletime.
 2014-11-28 15:08:46 +01:00
m.overtheil 9da9cff768 Merge branch 'Spatial_searching-Rectangle_compiletimeD-gf' into Spatial_searching-final_acceleration-gf 
Conflicts:
	Spatial_searching/benchmark/Spatial_searching/nn3cgal.cpp
	Spatial_searching/include/CGAL/Kd_tree.h
	Spatial_searching/include/CGAL/Kd_tree_node.h
 2014-11-28 13:10:08 +01:00
m.overtheil 5b67887a5e Merge branch 'Spatial_searching-Sliding_Midpoint_Splitter_bugfix-gf' into Spatial_searching-final_acceleration-gf 2014-11-28 12:43:12 +01:00
m.overtheil d22d78a04f Reorder pts vector for spatial locality 
IMPORTANT: This only works for point types with a
default constructor! Added that in the test.
 2014-11-28 12:42:19 +01:00
m.overtheil 32877332ec Reorder pts vector 
NO WORKING CODE! Just for my synchronisytion
 2014-11-28 09:28:51 +01:00
m.overtheil cb4f9c3521 Divided Kd_tree_node into internal and leaf node 
The Kd_tree_node now has two derived classes Kd_tree_internal_node
and Kd_tree_leaf_node. This commit is tested under Windows x64
 2014-11-27 15:42:18 +01:00
m.overtheil afd47e07ee Started to divide Kd_tree_node in two types 
NO WORKING CODE! Commit is just for my own synchronisation
 2014-11-26 16:03:57 +01:00
Andreas Fabri d3f7d2565b Use CGAL_IA_FORCE_TO_DOUBLE to fix the tessuite 2014-11-26 14:44:05 +01:00
m.overtheil 381fd858ea 2d 2014-11-18 08:43:24 +01:00
m.overtheil d598526bfe added dimension template argument to doc 2014-11-04 15:59:56 +01:00
m.overtheil 87aa5ad7c3 Moved to namespace internal,renamed HAS_DIMENSION to HAS_DIMENSION_TAG 2014-11-03 13:33:49 +01:00
m.overtheil 9a7660b6fa Added compatibility for traits without dimension_tag 2014-11-03 11:15:49 +01:00
m.overtheil 8f94bc329b Replaced all int dimension with dimension_tags 2014-10-31 15:02:04 +01:00
m.overtheil c0a37c0a05 Bugfix for Sliding_midpoint splitting rule(default) 
Fixed a bug causing the tree to have linear depth in some degenerated
cases, e.g. when points are on a segment or on a hyperplane in general.
Added a check of the tight bounding box to avoid that.

Also set the default bucket_size from 3 to 10, which results in much
better runtime.
 2014-10-31 10:37:58 +01:00
m.overtheil f001def817 added statistics 2014-10-24 12:25:48 +02:00
m.overtheil 9246366757 test for bug in kd-tree 2014-10-17 08:23:54 +02:00
Sébastien Loriot 7247e971fc fix wrong documented traits 2014-09-12 13:23:46 +02:00
Mael Rouxel-Labbé 12a72d1a35 Merge branch 'Spatial_searching-fix_fuzzy_iso_box_contains-GF' 
Tested in CGAL-4.5-Ic-113.

Approved by the Release Manager.
 2014-08-06 18:52:39 +02:00
Mael Rouxel-Labbé 0cface5c3c Fix Circular_querry.cpp 
The Fuzzy_sphere bug (c0cbdab) was previously undetected by
the testsuite because Circular_querry.cpp used circles
with radius that cannot exactly be represented (0.2) in
binary and a point could never exactly be on the circle
(the squared distance would be 0.04 + epsilon and the assertions
did not fail). This attempts to fix it by using decimals
that can exactly be represented.

The testsuite now compiles and runs succesfully locally.
 2014-07-15 18:24:51 +02:00
Mael Rouxel-Labbé c0cbdab3d8 Fix a bug in Spatial_searching's fuzzy_sphere 
The contains() function (and its variations) returned false
for all points on the sphere.
 2014-07-15 17:54:45 +02:00
Sébastien Loriot e97efd228f prevent linking 2014-07-15 14:25:21 +02:00
Mael Rouxel-Labbé 5ed7255adb Fix a bug in Spatial_searching's fuzzy_iso_box 
The contains() function (and its variations) returned false for
all points points P(x,y,z) such that x=box.xmax() or y=box.ymax()
or z=box.zmax(). This excluded some points from being found when
querying a kd tree.
 2014-07-08 15:55:14 +02:00
Eric Berberich dee9fc8235 Merge branch 'Snap_rounding_2-kd_tree_replacement-wkhan-old' into Snap_rounding_2-kd_tree_replacement-wkhan 
Conflicts:
	Installation/changes.html
 2014-04-09 10:11:35 +02:00
Eric Berberich 3723b74b61 removed warning (comparison signed/unsigned) 2014-04-03 11:27:47 +02:00
Eric Berberich 1d24106829 removed waarning (comparison signed/unsigned) shown in testsuite 2014-03-29 12:07:34 +01:00
Eric Berberich 3bec7b2823 added comment and allow that capacity might be larger than demanded 2014-03-28 14:56:03 +01:00
Eric Berberich 9d8a02aa46 rephrased documentation for capacity in Kd_tree 2014-03-28 14:50:18 +01:00
Waqar Khan 7b06c4b7c8 Cout changed to cerr in the error message. 2014-03-28 14:46:12 +01:00
Waqar Khan 98e6007dd3 * Added the capacity() function to the Kd_tree.h and also added its documentation 
* Added a test that checks the reserve() and capacity() function for Kd_tree
 2014-03-26 18:02:04 +01:00
Eric Berberich 398613ec71 rephrased documentation of "reserve" to proposal of Sebastien 2014-03-10 12:12:59 +01:00
Eric Berberich 85894658ef fixed copyright headers 2014-03-10 00:03:24 +01:00
Waqar Khan 1c355ef42a 1. "Snap_rounding_traits_2.h" "Snap_rounding_kd_2.h" "Kd_tree.h" "snap_rounding_data.cpp", Changed the File header signature to match the templated signatures. 
2. Made the required changes in the concepts i.e. in "Snap_rounding_2/doc/Snap_rounding_2/Concepts/SnapRoundingTraits_2.h"
 3. Added documentation for the reserve() method of Kd_tree
 4. Deleted the un maintained olk kd_tree package
 2014-03-07 16:13:44 +01:00
Waqar Khan 0e14493632 1. "snap_rounding_data.cpp" Added Example usage in-code documentation. Removed the timer that recorded the amount of time taken by the snap_rounding. The timer was initally added to test the snap rounding running time difference using new Kd_trees 
2. "Snap_rounding_kd_2.h" "Snap_rounding_traits_2.h" Added documentation and changed Copyright information and authors appropriately.
3. "kd_tree.h" Renamed the reserve_to_capacity() to reserve().
4. Snap_rounding_kd_new.h deleted
 2014-03-01 18:58:40 +01:00
Sébastien Loriot f5e96a20ea add parenthesis 2014-02-24 07:09:13 +01:00
Sébastien Loriot 7451a3a238 fix incorrect name 2014-02-21 15:46:56 +01:00
Sébastien Loriot 0b3c2ae383 fix a documentation bug and add static assertions 
the class Search_traits_adapter must use only Lvalue_property_map since
  it uses the Cartesian_const_iterator from the base class which is usually
  simply the pointer on the double in the point. If the point returned by
  the property map is a temporaty, the iterator is invalid and its behavior
  is undefined
 2014-02-21 15:36:40 +01:00
Waqar Khan b46b37e7b2 reserve_to_capacity() method for Kd_tree.h that pre-allocated memory for points added. New Snap_rounding example added where the input data is taken from a file. Snap_rounding_kd_2.h modified to use the reserve_to_capacity method before creating the kd_tree. This improves the running time. 2014-02-18 01:41:44 +01:00
Sébastien Loriot 0fa2cacb60 remove doc_tex documentation (including developer manual) and old manual tools 2013-12-03 17:27:02 +01:00
Laurent Rineau 67a3824cec Change permissions of files created by Andreas 2013-10-04 16:57:11 +02:00
Andreas Fabri 6c547e5663 Mainly added includes 2013-09-13 22:24:30 +02:00
Andreas Fabri 60ebed5255 Passing to Simple_cartesian makes it 30% faster 
Seeding random makes it reproducible
 2013-08-27 09:28:10 +02:00
Laurent Rineau bc03aaf30b Put doc/ in the global dont_submit file 2013-08-20 10:57:03 +02:00
Sébastien Loriot d282ade623 use \cgalCite instead of \cite 
using perl -i -pe 's/\\cite\s*{?([a-zA-Z0-9:-]+)}?/\\cgalCite{$1}/g'
 2013-08-05 18:25:26 +02:00
Sébastien Loriot b2ef3b8673 Merge branch 'doc-remove_gif-local' 
Successfully test in CGAL-4.3-Ic-102

This commit fixes a few issues in the doxygen documentation and in particular
the figure for the generation of latex doc.

Approved by the interim release manager

xplain why this merge is necessary,
 2013-07-26 17:50:07 +02:00
Sébastien Loriot 2dfe8a3d73 workaround for a doxygen bug: remove space after /!* to avoid a verbatim env 
this happens if you have an empty line or the text directly after /!*
to find them in the generated documentation, grep for "pre class=\"fragment\""
(a few of them are legitimate however)
 2013-07-25 14:58:53 +02:00