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2194 Commits

Author SHA1 Message Date
Sébastien Loriot efc0c525e8 include non-deprecated header 2021-01-15 10:02:00 +01:00
Laurent Rineau 37f85e7702 Merge pull request #5209 from janetournois/Mesh_3-debug_global_optimizers-jtournois 
Mesh_3 global optimizers - improve projection to surface
 2020-12-09 14:58:56 +01:00
Jane Tournois 2d73ef361e remove wrong assertions 
when v has dimension 3, its incident cells can be either all inside
or all outside the complex
 2020-12-04 17:18:04 +01:00
Jane Tournois 232cf10af8 remove unused code 2020-12-04 10:40:42 +01:00
Mael Rouxel-Labbé 35fa50213a Avoid copies in Mesh_triangulation_3's trivial functions 
These exist because of P3M3
 2020-12-03 12:25:37 +01:00
Maxime Gimeno 5ee03985bf Fix atomic wrong function 2020-11-30 11:37:16 +01:00
Jane Tournois 0ed6aca5a4 replace get_closest_point() by get_closest_triangle() 
to use this function with Periodic_3_mesh_3
 2020-11-27 13:04:06 +01:00
Jane Tournois 9666b3cb73 replace PCA of points by PCA of triangles 
to make projection more precise and avoid moving a point inside a
protecting ball
 2020-11-26 16:25:55 +01:00
Sébastien Loriot 93d62b969c add forward declaration 
File_medit.h is included by Mesh_complex_3_in_triangulation_3_base.h
 2020-08-18 14:09:06 +02:00
Jane Tournois 1e42f4c9d4 rename IO functions for MEDIT format and a Triangulation_3 2020-08-18 11:16:58 +02:00
Jane Tournois 0a7d8cfd25 add an example with IO for a .mesh file 2020-08-18 10:42:20 +02:00
Laurent Rineau 25eeff801b Fix a warning 
```
.../CGAL/Mesh_3/C3T3_helpers.h:1249:14: warning: ‘*((void*)& surface +4)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 1249 |       return surface;
      |              ^~~~~~~
```
 2020-07-22 12:29:55 +02:00
Laurent Rineau 251074ad54 Use an API compatible with boost::optional and std::optional 2020-07-22 12:29:39 +02:00
Laurent Rineau 72d280fdd9 Merge pull request #4803 from janetournois/Tet_remeshing-from_c3t3_input-jtournois 
Tetrahedral remeshing from C3T3
 2020-07-08 16:24:42 +02:00
Jane Tournois 612d6772b9 operator* between enum and floating type is deprecated, fix warning 2020-07-07 11:13:16 +02:00
Jane Tournois 5b474e0075 replace deprecated std::not1 by std::not_fn 
std::not1 is deprecated in C++17 and removed from C++20

+ add a C++17 macro in config.h
 2020-07-07 10:49:58 +02:00
Laurent Rineau 4d1d4e51eb Merge pull request #4809 from lrineau/Mesh_3-move_semantic_for_c3t3-GF 
Add move-semantic for c3t3, and a test
 2020-07-03 16:21:27 +02:00
Jane Tournois 2a4b4a2a10 set the Surface_patch_index also in the infinite cell 
otherwise facet and its mirror don't have the same patch index
 2020-07-03 07:35:20 +02:00
Laurent Rineau 36fd23d27c Fix the move-constructor: `far_vertices_` was forgot 2020-07-02 16:50:38 +02:00
Jane Tournois 460b1f29a6 Merge branch 'master' into Tet_remeshing-from_c3t3_input-jtournois 
# Conflicts:
#	Tetrahedral_remeshing/include/CGAL/Tetrahedral_remeshing/internal/tetrahedral_adaptive_remeshing_impl.h
 2020-07-01 08:01:05 +02:00
Laurent Rineau 07eacf5231 Merge pull request #4795 from janetournois/Mesh_3-fix_optimisers_parallel-jtournois 
Mesh_3 - fix parallel optimisers
 2020-06-30 16:38:05 +02:00
Jane Tournois 40668a297e fix protection of parallel code 2020-06-29 07:07:13 +02:00
Jane Tournois 7740686d78 remove trailing whitespace 2020-06-26 15:54:17 +02:00
Jane Tournois 2a3dba9156 make build_triangulation() more generic with Surface_patch_index instead of int 
this is necessary to be able to remesh a C3t3 with a Surface_patch_index that
is not convertible to `int`
It is the case with meshes generated from images, which often use
std::pair<Subdomain_index, Subdomain_index>
 2020-06-26 15:53:02 +02:00
Jane Tournois 615ac14086 protect incident_cells_threadsafe with macro 
Periodic_3_mesh_3 does not have an implementation of these functions
because it does not have a parallel implementation
 2020-06-26 15:51:15 +02:00
Laurent Rineau 5572d9dba8 Add move-semantic for c3t3, and a test 2020-06-24 10:59:19 +02:00
Laurent Rineau bd7d3c498f Merge pull request #4786 from lrineau/Mesh_3-fix_compilation_error_MSVC2015-GF 
Continue workaround for MSVC2015
 2020-06-23 18:49:58 +02:00
Jane Tournois d4b7af22ba use tr_.try_lock_and_get_incident_cells() 
and remove a "todo" of CJ
 2020-06-19 13:31:52 +02:00
Jane Tournois 7cd18cd659 unlock after the move, even if there is no topological change 
to avoid making changes with another thread
 2020-06-19 13:31:50 +02:00
Jane Tournois c6a922c9dc fix Facet_updater parallel 
`vertex_to_proj` was not locked and this was causing seg faults
 2020-06-19 13:31:49 +02:00
Laurent Rineau 113c3d1d6f Continue woraround for MSVC2015 
That is a followup to commit 5fbaaa9e42
from PR #4468.

I also chose a better name `is_null` instead of
`compare_weighted_circumcenter`.
 2020-06-15 15:56:28 +02:00
Laurent Rineau 871c97273a Merge pull request #4496 from lrineau/CGAL-move_semantic_for_triangulations-GF 
Add move-semantic to Compact_container and Triangulations
 2020-06-03 16:23:22 +02:00
Laurent Rineau a828cb0d06 Merge pull request #4620 from janetournois/Tetrahedral_remeshing-new-jtournois 
Tetrahedral remeshing - new package
 2020-06-03 16:23:17 +02:00
Sébastien Loriot 4dda7b6c80 update license of c3t3 related files 
a proper package must be created in a later release
 2020-05-27 15:53:05 +02:00
Laurent Rineau dcc4fb1cc1 Merge remote-tracking branch 'cgal/master' into CGAL-move_semantic_for_triangulations-GF 
# Conflicts:
#	STL_Extension/include/CGAL/Compact_container.h
 2020-05-20 09:46:26 +02:00
Sébastien Loriot 7c4586be1b Merge remote-tracking branch 'cgal/releases/CGAL-5.0-branch' 2020-05-12 16:59:02 +02:00
Sébastien Loriot fb83386f44 Merge remote-tracking branch 'cgal/releases/CGAL-4.14-branch' 2020-05-12 16:58:32 +02:00
Jane Tournois 9d194e3814 add missing includes 2020-05-06 15:18:57 +02:00
Jane Tournois 28a9cb150a replace std::set<Vertex_handle> with std::array<Vertex_handle> 
for facets vertices
this should be a lot more efficient
 2020-05-06 15:11:06 +02:00
Laurent Rineau 3951c38637 Fix UBSAN error: do not bind reference to null pointer 
Equivalent to #4683
 2020-05-04 18:54:19 +02:00
Jane Tournois 8ec09f40fc remove dependency on Skin_surface_3 
by replacing Triangulation_incremental_builder_3 by
build_triangulation() from tet_soup_to_c3t3.h
(which is part of Mesh_3 as C3T3)
 2020-05-04 16:09:27 +02:00
Jane Tournois 977185466a fix .mesh reader 
- fix order of vertices depending on parity of i
- add infinite facets to incident cells map before assigning neighbors
 2020-04-22 09:34:46 +02:00
Laurent Rineau fe1f731e22 Fix timestamps 2020-04-21 17:08:57 +02:00
Maxime Gimeno 5b2d46cfa0 Fixes for min/max 2020-04-21 12:04:45 +02:00
Maxime Gimeno 50766d9d03 Fixes for min/max 2020-04-21 11:52:56 +02:00
Maxime Gimeno e9d41d7b7d Fixes for min/max 2020-04-21 11:38:37 +02:00
Jane Tournois cf58a08a55 Merge branch 'master' into Tetrahedral_remeshing-new-jtournois 2020-04-20 06:24:36 +02:00
Jane Tournois e985f03817 initialize time stamp with -1 in Mesh_vertex_base_3 
the time stamper checks whether it is -1 or not,
with -1 as default value.
It was not initialized so the behaviour was not as expected.

Similar to what is done in 0e9389b9fe0ad90aaa30ba5d634824d59c7f804d
for Mesh_cell_base_3
 2020-04-17 14:05:37 +02:00
Sebastien Loriot 98fafe4ef1
Merge pull request #4514 from MaelRL/CGAL-Fix_warnings-GF 
Fix (some) testuite warnings
 2020-04-16 18:15:11 +02:00
Jane Tournois 395621a5fa initialize time stamp with -1 in Mesh_cell_base 
the time stamper checks whether it is -1 or not,
with -1 as default value.
It was not initialized so the behaviour was not as expected.
 2020-04-16 16:40:50 +02:00