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839 Commits

Author SHA1 Message Date
Luis Peñaranda dd5a60d1af avoid one more warning 2013-11-23 00:23:44 -02:00
Luis Peñaranda 7f47236d30 avoided some warnings with -Wunused-local-typedefs 2013-11-22 01:44:43 -02:00
Luis Peñaranda cc43bc6310 remove dont_submit file 2013-11-21 00:03:04 -02:00
Luis Peñaranda bf9a0db244 avoid some g++ -Wall warnings 2013-11-20 23:55:17 -02:00
Luis Peñaranda fb9bccbc71 removed a failing 'typename' keyword 2013-11-20 12:06:29 -02:00
Luis Peñaranda 1d81d04fb4 fixed test program, which made testsuite fail 2013-11-20 12:05:13 -02:00
Luis Peñaranda b9a3922f0f Revert "uncommented a test which did not pass in the past" 
This reverts commit 3f08a80977.
 2013-11-20 12:04:54 -02:00
Luis Peñaranda 8d62e0d56f minor doc fix in Algebraic_kernel_d reference 2013-11-19 20:41:27 -02:00
Luis Peñaranda 3f08a80977 uncommented a test which did not pass in the past 2013-11-19 18:10:54 -02:00
Luis Peñaranda dfa7218c85 added missing file 2013-11-19 16:15:32 -02:00
Luis Peñaranda fa7e46cf13 updated main test and removed other obsolete tests 2013-11-19 16:11:59 -02:00
Luis Peñaranda 8a58557f40 removed old files 2013-11-19 16:08:29 -02:00
Luis Peñaranda cbdca2c35d Code refactoring. 
The obsolete and unused code was removed. The interface was cleaned. The
memory leaks dissapeared (according to valgrind), because the pointers
to RS memory were removed.

For test purposes, the rational interface is not tested.
 2013-11-19 16:07:24 -02:00
Laurent Rineau 38e5dc102d Remove execution permissions 2013-11-13 14:05:43 +01:00
Laurent Rineau 75067bd072 Fix several I/O issues with Apple-clang-3.2 and its libc++ 2013-10-11 16:12:02 +02:00
Laurent Rineau 21abdd09ed Merge remote-tracking branch 'origin/Algebraic_kernel_d-RS_remove_release_warnings' 
- Remove warnings in include/CGAL/RS

Tested in CGAL-4.3-Ic-194
 2013-10-09 14:49:45 +02:00
Laurent Rineau 1213dfbc0b Merge remote-tracking branch 'origin/Algebraic_kernel_d-split_tests-GF' 
- Split several test files of Polynomial, Algebraic_kernel_d, and
  Number_types into multiple test files, to avoid heap overflows of VC++.

Tested in CGAL-4.3-Ic-194
 2013-10-09 14:29:02 +02:00
Luis Peñaranda 34485ce89d removed unused variables in release from rs calls 2013-10-04 15:32:04 -03:00
Luis Peñaranda d53c137525 removed unused variables in release from dyadic.h 2013-10-04 15:31:27 -03:00
Laurent Rineau 67a3824cec Change permissions of files created by Andreas 2013-10-04 16:57:11 +02:00
Laurent Rineau d64828378d Merge remote-tracking branch 'origin/Algebraic_kernel_d-RS_remove_leading_underscores-penarand' 
Approved by the Release Manager, for CGAL-4.3
Tested in CGAL-4.3-Ic-188.
 2013-10-03 17:05:48 +02:00
Andreas Fabri f37d2940b6 split one testcase as VC++ suffers from a combinatorial explosion 2013-09-25 15:04:35 +02:00
Luis Peñaranda 5c74f47533 bugfix in polynomial converter 2013-09-24 17:36:42 -03:00
Luis Peñaranda f4ddb0eeb5 removed leading _ from polynomial interface 2013-09-19 16:55:54 -03:00
Luis Peñaranda 1f91465c32 removed leading _ from polynomial converter 2013-09-19 16:22:55 -03:00
Luis Peñaranda 7481e18eae remove leading underscores from isolator interface 2013-09-19 16:15:23 -03:00
Luis Peñaranda 44117e0ae2 removed leading underscores from memory interface 2013-09-19 16:08:40 -03:00
Luis Peñaranda 615fdb7905 remove leading underscores from class algebraic_1 2013-09-19 16:00:19 -03:00
Luis Peñaranda 81434d69fc corrected typo 2013-09-19 15:43:28 -03:00
Luis Peñaranda 9f45c20123 changed c-style to c++-style comments 2013-09-19 15:37:59 -03:00
Luis Peñaranda f92dc1c904 removed leading underscores from template names 2013-09-19 13:30:45 -03:00
Andreas Fabri 6c547e5663 Mainly added includes 2013-09-13 22:24:30 +02:00
Michael Hemmer 11c8477dec fixed doxygen issue 2013-08-21 16:09:14 +02:00
Laurent Rineau bc03aaf30b Put doc/ in the global dont_submit file 2013-08-20 10:57:03 +02:00
Sébastien Loriot d282ade623 use \cgalCite instead of \cite 
using perl -i -pe 's/\\cite\s*{?([a-zA-Z0-9:-]+)}?/\\cgalCite{$1}/g'
 2013-08-05 18:25:26 +02:00
Sébastien Loriot 2dfe8a3d73 workaround for a doxygen bug: remove space after /!* to avoid a verbatim env 
this happens if you have an empty line or the text directly after /!*
to find them in the generated documentation, grep for "pre class=\"fragment\""
(a few of them are legitimate however)
 2013-07-25 14:58:53 +02:00
Sébastien Loriot d4d9bc212b replace in the doc \R by \mathbb{R} 
\R is not a valid latex command
I used: sed -i 's/\\f$\s*\\R/\\f$ \\mathbb{R}/g'
 2013-07-10 17:07:43 +02:00
Sébastien Loriot 716f87d2d7 rename Hidden_type to unspecified_type and update its description 2013-06-13 18:48:58 +02:00
Ross Hemsley 4d9caf3763 Added names that were missing into the Doxyfile.in entries. 
Also modified Installation/CMakeLists.txt to push the version number variable to the parent level
so that it can be accessed by the documentation
 2013-05-30 17:55:43 +02:00
Philipp Möller 4d469821f7 Generated Doxyfile.in and dependencies 2013-05-30 14:13:47 +02:00
Sébastien Loriot 7e15467c72 new cgal doxygen advanced macro to put the text inside a div 2013-05-27 19:36:33 +02:00
Laurent Rineau b6ffa7c425 Merge branch 'CGAL-fix_warnings-GF' 
That branch was successfully tested in CGAL-4.2-Ic-205.
 2013-03-27 12:23:31 +01:00
Andreas Fabri 0cbc8b0e40 remove unused parameters 2013-03-23 08:45:06 +01:00
Sébastien Loriot 9fcf46e11a replace CGAL_[kernel/qpe/triangulation/]_assertion by assert in tests 
this should be the case, following our guidelines.

using:
find */test/* -name '*.[hc]*' | xargs sed -i 's/CGAL_assertion/assert/g'
 2013-03-21 10:50:55 +01:00
Sébastien Loriot 7e59c14580 add a header to classified reference pages using a doxygen macro 2013-03-12 14:33:49 +01:00
Laurent Rineau 2d8da664a3 Merge branch 'CGAL-fix_warnings-gdamiand' 
Conflicts:
	.gitignore
	Skin_surface_3/examples/Skin_surface_3/CMakeLists.txt
 2013-02-22 13:02:37 +01:00
Laurent Rineau 5668111b3d Do not use 'offsetof' on non-POD 
That fixes the following commit:

  | commit ae3602cb5d
  | Author: Andreas Fabri <andreas.fabri@geometryfactory.com>
  | Date:   Thu Feb 14 12:09:18 2013 +0100
  |
  |     Don't use BOOST_MULTI_INDEX_MEMBER
  |
 2013-02-20 16:44:02 +01:00
Laurent Rineau 26a7e70785 New license.txt files (eol changes) 
The new version 2.13.0 of licensecheck has changed the spaces at eol.
 2013-02-19 16:46:39 +01:00
Andreas Fabri 4bbc6ddd39 static_casts, switching to size_t, comparing a pointer with NULL to avoid warnings 2013-02-15 09:27:15 +01:00
Andreas Fabri ae3602cb5d Don't use BOOST_MULTI_INDEX_MEMBER 2013-02-14 12:09:18 +01:00
Andreas Fabri 28b5b64347 no need for a variable for the exception 2013-02-12 19:17:36 +01:00
Andreas Fabri 64787d9b73 use bool instead of int 2013-02-12 19:16:01 +01:00
Laurent Rineau 51ea960be6 Fix warnings about unused types or variables. 2013-02-08 16:50:02 +01:00
Laurent Rineau d19578725b Fix warnings 2013-02-07 18:15:23 +01:00
Sébastien Loriot 716d6f03de fix linking error and a typo in nested type name 2013-01-31 18:19:26 +01:00
Andreas Fabri a26af0e454 remove unused variable in an example 2013-01-23 15:57:53 +01:00
Sébastien Loriot 91745e7ccf fix linking 2013-01-07 20:43:56 +01:00
Sébastien Loriot 95d48245e1 add classified ref man for Algebraic Kernel 2013-01-07 14:45:28 +01:00
Philipp Möller 6e595d4e7c Missing namespaces for linking to Algebraic_kernel 2012-12-21 14:14:04 +01:00
Sébastien Loriot 4c8c87f241 Merge branch 'remove_cpp0x' 2012-12-21 08:36:26 +01:00
Eric Berberich eb11ded35e packages for which I do maintenance stuff 2012-12-20 10:56:08 +01:00
Sébastien Loriot 82b2ebc865 apply the cpp0x namespace renaming in all files 2012-12-19 11:33:17 +01:00
Philipp Möller 75f69570dc Change the titles of mainpages to "User Manual" 
This leads to a slightly odd result in the search for "User Manual",
but makes the pages themselves more consistent.
 2012-12-13 14:47:09 +01:00
Philipp Möller 1adf441b18 Convert all CRLF files to LF 2012-12-03 18:44:24 +01:00
Andreas Fabri c2564ca24e improve illustration 2012-12-02 22:42:19 +01:00
Sébastien Loriot 9576be3c3b add doc in dont_submit 2012-11-27 08:42:02 +01:00
Sébastien Loriot ae8362b7d6 replace \cgalModels ::FOO by \cgalModels `FOO` 
using:
 perl  -pi -e 's/\\cgalModels\s+::([A-Za-z0-9_:]+)\s*$/\\cgalModels `$1`\n/'
 2012-11-23 09:37:53 +01:00
Andreas Fabri 625f9f6cd7 after git merge remotes/origin/hot-fixes-for-Git 2012-11-20 13:02:17 +01:00
Sébastien Loriot 0f69c2a512 remove cpp0x namespace from documentation pages 2012-11-14 16:16:15 +01:00
Sébastien Loriot 8d741d504d remove % in section name 2012-11-14 16:10:15 +01:00
Sébastien Loriot 128b02abb8 update CGAL custom doxygen macros 
corresponds to a run of the script Documentation/conversion_tools/rename_macros.sh
+manual edit of doxyassist.xml and pkglist_filter.py
 2012-11-14 00:31:05 +01:00
Sébastien Loriot ae159cbdf3 replace markup #, ##, ### by \section, \subsection and \subsubsection 
(script replacement)
 2012-11-06 22:02:15 +00:00
Andreas Fabri 7a6634b5a7 No need for CGAL:: in user manuals 2012-10-31 20:11:16 +00:00
Andreas Fabri 59877a8d52 linking and unlinking 2012-10-30 13:40:03 +00:00
Philipp Möller 31a3c07418 Turn \refines :: into \refines `X` globally 2012-10-25 09:48:39 +00:00
Philipp Möller 31e9eadf8b Fix all PackageDescriptions to a newer layout 2012-10-19 15:52:31 +00:00
Philipp Möller 36b8516419 Missing examples 2012-10-09 16:46:42 +00:00
Michael Hemmer 8cfa1699a3 update email 2012-10-09 11:52:16 +00:00
Philipp Möller bc48dfe5a0 Be consistent about author/authors 2012-10-03 16:40:16 +00:00
Philipp Möller c9fdbf3edb Add an anchor to each level one heading, so we get a nice tree in the 
user manuals.
 2012-10-02 11:53:01 +00:00
Philipp Möller 37778547bf Fix example to point to paths similar to a flat layout 2012-10-01 18:02:44 +00:00
Eric Berberich 177fa5f3ed reduce running time 
at some point we need to allow expensive tests
 2012-09-27 21:47:48 +00:00
Philipp Möller 9d96057636 Add PkgDependsOn to the package summary 2012-09-27 11:13:37 +00:00
Philipp Möller b64ba48134 The changes to move the package overview labels into the 
PackageDescription.
 2012-09-25 17:17:49 +00:00
Luis Peñaranda fc95783370 fix bug in refinement with very small precisions 2012-09-25 14:33:19 +00:00
Eric Berberich 6fe1a41fa3 for approximation there were too few tests and some were not correct 
Alex and I improved the tests for approximation of algebraic reals:
- more polynomials (with small and large constant and quadratic coefficient)
- added a root really close to zero
- test all roots of polynomial
- added many precisions (including exotic ones)
Known issue: RS kernel has problem with prec = 8
 2012-09-21 14:07:30 +00:00
Philipp Möller 0aa7cd1c3b Global heading reduction. Rename some Parameter section to Template 
Parameters. Fix dependencies.
 2012-09-21 09:42:24 +00:00
Andreas Fabri accee5c864 unlink,link, autotoc 2012-09-21 07:23:45 +00:00
Philipp Möller e54098fb57 Throw out left over Classified files and move their content if 
necessary.
 2012-09-20 16:29:19 +00:00
Philipp Möller 1954eff3d6 * build normalized mainpage anchors 
* better naming for Pkg commands
* User and Reference Manual links from the PackageOverview
 2012-09-20 15:30:03 +00:00
Philipp Möller 6783a9410b Added Algebraic_kernel_d doc. 2012-09-18 10:32:13 +00:00
Luis Peñaranda 98ea5fbe8f removed useless pointers from algebraic numbers 2012-08-24 14:14:19 +00:00
Luis Peñaranda 760211da15 allocate space for endpoints before refinement, in some cases 2012-08-23 18:16:41 +00:00
Luis Peñaranda a97e6329a0 improved algebraic number comparison 2012-08-23 18:16:37 +00:00
Laurent Rineau 2db4effa7e CMake: Fix the handling of cmake_policy 
That is a followup-to my commit last year:
  | ------------------------------------------------------------------------
  | r63198 | lrineau | 2011-04-28 19:45:22 +0200 (Thu, 28 Apr 2011) | 5 lines
  | 
  | Try to fix my last revision about cmake_policy, with CMake-2.6.x
  | 
  | CMake gives an error if one tries to use cmake_policy(VERSION x.y.z) if
  | x.y.z is greater than the current CMake version.
  | 
  | ------------------------------------------------------------------------

The following check:
  if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}" VERSION_GREATER 2.6)
is useless just after a call to:
 cmake_minimum_required(VERSION 2.6.2)



The script used to fix that was:


#!/usr/bin/env perl

$replacement=<<'END';
if("${CMAKE_MAJOR_VERSION}.${CMAKE_MINOR_VERSION}.${CMAKE_PATCH_VERSION}" VERSION_GREATER 2.8.3)
  cmake_policy(VERSION 2.8.4)
else()
  cmake_policy(VERSION 2.6)
endif()
END

while(<>) {
    if(/if\("\${CMAKE_MAJOR_VERSION}.\${CMAKE_MINOR_VERSION}" VERSION_GREATER 2.6\)/) {
        while(<>) {
            if(/^endif\(\)/) {
                print "$replacement";
                while(<>) {
                    print;
                }
                exit 0
            }
        }
    }
    print;
}
 2012-08-22 12:35:03 +00:00
Laurent Rineau acf789673e Bad ordering of MPFI and RS3: MPFI can be removed. 2012-08-02 10:32:33 +00:00
Laurent Rineau db194534c7 First big patch to fix -Wunused-local-typedefs 
-Wunused-local-typedefs is a new warning flag of gcc-4.7, and it will enabled
 by -Wall since gcc-4.8 (not yet released).

The fix is a big set of removals of unused typedefs (or comments, or moves,
depending on the context).
 2012-08-01 13:29:16 +00:00
Luis Peñaranda faedebaba5 added flag to use ugcd 2012-07-19 15:46:15 +00:00
Luis Peñaranda 7b2ddd3188 avoided some link errors in gcd implementation 2012-07-18 19:20:54 +00:00
Eric Berberich f87bbe2479 cleanup code as indicated by compiler warnings 2012-07-08 10:47:58 +00:00