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Author SHA1 Message Date
Simon Giraudot e6c757f463 Begin working on reference manual 2015-10-07 16:00:51 +02:00
Simon Giraudot 14567ae261 Add variant with default diagonalize traits 2015-10-07 16:00:51 +02:00
Simon Giraudot fea22733ee Speed up using list instead of queue (avoid multiple copies) + bugfix 2015-10-07 16:00:51 +02:00
Simon Giraudot 5ab793531c Bugfix: if one of the two sides is empty, only treat the non-empty side 2015-10-07 16:00:51 +02:00
Simon Giraudot ed2d3167e2 Stack is faster than queue in this case 2015-10-07 16:00:51 +02:00
Simon Giraudot 7babff9f05 Optimizations (using splice for lists and reference for queue.front()) 2015-10-07 16:00:51 +02:00
Simon Giraudot 0841e423a2 Add example for hierarchical clustering 2015-10-07 16:00:51 +02:00
Simon Giraudot eb7266a42d Cleaning/reorganizing code, use diagonalize_traits and add variants with default parameters and template deduction 2015-10-07 16:00:50 +02:00
Simon Giraudot e8dd34cb21 Implemented the efficient computation of the second centroid. 
The hierarchical clustering algorithm gets about 15% faster
(on test Eglise Fontaine, from 91s to 76s).
 2015-10-07 16:00:50 +02:00
Simon Giraudot ee1e7ee714 Added the alternative implementation of hierarchical clustering using 
the Eigen library.

For now, both implementations are available (switchable with a
 2015-10-07 16:00:50 +02:00
Pierre Alliez 00fad8756a Add comments in hierarchical clustering and fix indentations 2015-10-07 16:00:50 +02:00
Simon Giraudot b87d1bbc3e Very first version of the hierarchical clustering added (work in 
progress).

It contains somes functions that may be more relevant in some other
package :
* 2 functions to compute the covariance matrix of a 3D point set
* 2 functions to split a point set according to a plane

Also the function of the actual hierachical clustering algorithm.
 2015-10-07 16:00:50 +02:00
Sebastien Loriot 62644a62aa Merge pull request #318 from sgiraudot/CGAL-Solver-package-GF 
Regroup solver interface in Solver_package
 2015-10-07 15:54:48 +02:00
Simon Giraudot 30323c816a Write PLY headers 2015-10-07 15:34:08 +02:00
Simon Giraudot 1e068b0844 Skeleton of write_ply_points.h file 2015-10-07 15:12:19 +02:00
Simon Giraudot 0004aed5bc Bug fix: explicitly ask an integer when reading char/uchar from stream 2015-10-07 15:06:08 +02:00
Simon Giraudot a8bea5e6d9 Handle detailed types (e.g. int16 instead of short) 2015-10-07 14:19:26 +02:00
Simon Giraudot f732c100c3 Fix warnings and use union instead of reinterpret_cast 2015-10-07 14:08:03 +02:00
Simon Giraudot c2e38b72a6 Merge branch 'Point_set_processing_3-IO_ply-GF-old' into Point_set_processing_3-IO_ply-GF 2015-10-07 13:52:06 +02:00
Simon Giraudot fddcb24197 Polyhedron demo ply_to_xyz reader 2015-10-07 13:50:57 +02:00
Simon Giraudot 93c52c605c New test for ply reader 2015-10-07 13:50:41 +02:00
Simon Giraudot 5c12ec1e4e Add new ply test (ascii format) 2015-10-07 12:40:46 +02:00
Simon Giraudot 850f28ed07 Ply reader for point sets 2015-10-07 12:10:29 +02:00
Simon Giraudot 442db8be13 Fix OFF magic number 2015-10-07 10:57:07 +02:00
Simon Giraudot 867a731d48 WIP: processing PLY header 2015-10-06 15:36:35 +02:00
Simon Giraudot 6b4da62cab Update read_test with new ply function 2015-10-06 15:16:16 +02:00
Simon Giraudot ac3dbad721 Skeleton of new read_ply_points.h file 2015-10-06 15:01:50 +02:00
Simon Giraudot ac591cf257 Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-29 13:50:17 +02:00
Simon Giraudot 692a8686ca Fix warning (implicit conversion double to std::size_t) 2015-09-29 13:46:37 +02:00
Sébastien Loriot da650cbd1c Merge branch 'old/CGAL-Solver-packages-GF' into CGAL-Solver-package-GF 2015-09-26 15:47:54 +02:00
Simon Giraudot 13e4a76cd8 Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-24 12:45:58 +02:00
Simon Giraudot 36723443a4 Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-09-23 10:29:14 +02:00
Sébastien Loriot cdfc7f1c31 Merge branch 'old/CGAL-split_packages-GF' into CGAL-split_packages-GF 2015-09-23 10:08:41 +02:00
Sébastien Loriot b970fc80ef Merge branch 'old/Surface_reconstruction_points_3-Change_package_name-GF' into Surface_reconstruction_points_3-Change_package_name-GF 2015-09-22 09:54:18 +02:00
Sébastien Loriot 68aa21292a Merge branch 'old/CGAL-Solver-packages-GF' into CGAL-Solver-package-GF 2015-09-21 07:34:18 +02:00
Simon Giraudot a4f242a0cc Replace Internal_diagonalize_traits by Diagonalize_traits + corrections in Concepts/Models 2015-09-16 11:41:26 +02:00
Andreas Fabri 58b7dc7319 fix typo 2015-09-16 09:29:09 +02:00
Andreas Fabri 23740f5921 add a dependency 2015-09-16 09:25:02 +02:00
Simon Giraudot b840307161 Generate compile-time error if Parallel_tag is used without TBB 2015-09-08 15:31:28 +02:00
Simon Giraudot 2c6e6e5e57 Update Reference Manual with additional template parameter 2015-09-08 12:38:34 +02:00
Simon Giraudot 935956a10f Merge branch 'Point_set_processing_3-TBB-GF-old' into Point_set_processing_3-TBB-GF 2015-09-08 11:11:07 +02:00
Simon Giraudot 95682d11e0 Update PSP examples with concurrency template 2015-09-08 10:44:36 +02:00
Simon Giraudot 0afe0249f9 Bugfix: badly placed #ifdef caused bug if TBB was not used 2015-09-08 10:42:47 +02:00
Simon Giraudot 63f77a05a5 Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-09-07 10:01:12 +02:00
Simon Giraudot d9d94f082e Update files with new package name (Poisson_surface_reconstruction_3) 2015-09-04 18:18:52 +02:00
Simon Giraudot 136de97318 Bugfix: DiagonalizeTraits now really returns largest eigenvalue + inversion of parameters in voronoi_covariance is corrected. 2015-09-04 16:01:46 +02:00
Simon Giraudot dd271ecca5 Revert "Bugfix: function extract_largest_(...) is now called extract_smallest_(...) to be consistent with what is actually extracted." 
This reverts commit 8410aab93c.
 2015-09-04 15:13:57 +02:00
Simon Giraudot 8410aab93c Bugfix: function extract_largest_(...) is now called extract_smallest_(...) to be consistent with what is actually extracted. 2015-09-03 18:55:19 +02:00
Laurent Rineau 9bae0c0e63 Merge pull request #270 from sgiraudot/Polyhedron_demo-WLOP_plugin-sgiraudot 
Polyhedron demo point set processing plugins
 2015-09-03 17:22:54 +02:00
Simon Giraudot 26aab5fc5c Use default diagonalization interface for VCM functions 2015-09-03 14:36:47 +02:00
Simon Giraudot 8f98d9dc0a Fixed indentation issues 2015-08-31 10:09:54 +02:00
Simon Giraudot 28e5432c16 Renaming 'VCM' to 'diagonalize' 2015-08-31 08:30:01 +02:00
Sébastien Loriot aed4e8b2fc fix doc typos 2015-08-28 15:36:29 +02:00
Simon Giraudot bd7ea48403 Propagating API change to Point_set_processing package (vcm_estimate_*) 2015-08-26 14:01:47 +02:00
Simon Giraudot 146378dd38 Fix compilation errors if TBB is missing (missing #ifdef in the files) 2015-08-24 10:22:54 +02:00
Simon Giraudot 9dccbee9ed Move VCMtraits to Solver package 2015-08-21 09:36:59 +02:00
Simon Giraudot abf9063561 Move Eigen_vcm_traits.h to Solver package 2015-08-20 16:43:58 +02:00
Simon Giraudot af8e73750c Merge branch 'CGAL-Solver-package-GF-old' into CGAL-Solver-package-GF 2015-08-20 11:51:34 +02:00
Simon Giraudot 05e0965655 Fix warnings of possible loss of data converting std::size_t to unsigned int 2015-08-19 15:22:17 +02:00
Simon Giraudot bf70be5a52 Update function calls with concurrency tag 2015-08-19 11:59:22 +02:00
Simon Giraudot 84528727a1 Fix warning unused variable 2015-08-18 11:50:26 +02:00
Simon Giraudot 24c89aaf00 Added missing TBB includes 2015-08-18 11:49:25 +02:00
Simon Giraudot 77779ff559 PCA estimate normals parallelized with TBB 2015-08-18 11:16:46 +02:00
Simon Giraudot 0902708bfd Removed useless namespace 2015-08-18 11:09:34 +02:00
Simon Giraudot 6f0113054a Removed useless point counter 2015-08-18 11:08:28 +02:00
Andreas Fabri 67d72675fe split packages 2015-08-17 23:46:59 +02:00
Simon Giraudot 9ae599848d Compute average spaciong parallelized with TBB 2015-08-17 12:12:35 +02:00
Simon Giraudot 8fa51591d7 Added missing tbb include 2015-08-17 12:04:38 +02:00
Simon Giraudot 82d91da597 Removed unused propertymap attribute 2015-08-17 08:29:16 +02:00
Simon Giraudot f85b38361a Jet estimate normals parallelized with TBB 2015-08-17 08:28:09 +02:00
Simon Giraudot 34cc20a034 Removed useless function 2015-08-14 17:18:47 +02:00
Simon Giraudot 734c491ac8 Jet smoothing parallelized with TBB 2015-08-14 17:12:02 +02:00
Sébastien Loriot bdc7271990 Fix "remove dont_submit to publish the doc" 
This fixes commit aeffc4587c.
 2015-07-31 09:54:12 +02:00
Sébastien Loriot aeffc4587c remove dont_submit to publish the doc 2015-07-30 17:44:48 +02:00
Sébastien Loriot 2668d83d4e Merge pull request #150 from 'cjamin/Point_set_shape_detection_3-cjamin' 
Add an algorithm to fit geometric primitives on a point set

Conflicts:
	Installation/changes.html
	Polyhedron/demo/Polyhedron/CMakeLists.txt
 2015-07-17 14:32:09 +02:00
Sébastien Loriot 50595505c4 Merge branch 'Fix_warnings-GF' 
Fixes warnings in various packages

Successfully tested in CGAL-4.7-Ic-87
Approved by the release Manager
 2015-07-17 14:21:21 +02:00
Sébastien Loriot d26e112cf4 fix warnings 2015-07-15 16:57:38 +02:00
Laurent Rineau f9917c487e CMake 2.8.11 2015-07-13 12:36:43 +02:00
Clement Jamin 3fac8e761a Merge branch 'Point_set_shape_detection_3-cjamin-old' into Point_set_shape_detection_3-cjamin 2015-06-30 10:36:11 +02:00
Clement Jamin ad91ed562f Fix a warning 2015-06-26 19:20:31 +02:00
Sébastien Loriot 646650be81 disambiguate call to std::sqrt for MSVC10 2015-06-10 16:12:59 +02:00
Sébastien Loriot a2b0267891 increase epsilon bounds 2015-06-08 12:08:08 +02:00
Sébastien Loriot 966f0188b2 force use of std::sqrt 2015-06-08 12:06:23 +02:00
Sébastien Loriot fb2a3a2f50 accomodate update of the halfspace intersection that is now outward oriented 2015-06-05 14:43:55 +02:00
Sébastien Loriot 11a75f1e3c remove extra semi-columns 2015-06-05 14:32:04 +02:00
Sébastien Loriot ca5685db61 add Jocelyn and Quentin as authors of Point set processing package 
Also update history section
 2015-06-04 11:36:45 +02:00
Sébastien Loriot c2cd87865e Merge branch 'old/gsoc2014-VCM_3-jmeyron' into gsoc2014-VCM_3-jmeyron 
Conflicts:
	Installation/changes.html
	Point_set_processing_3/doc/Point_set_processing_3/PackageDescription.txt
	Point_set_processing_3/doc/Point_set_processing_3/Point_set_processing_3.txt
	Point_set_processing_3/doc/Point_set_processing_3/examples.txt
	Point_set_processing_3/examples/Point_set_processing_3/CMakeLists.txt
	Polyhedron/demo/Polyhedron/CMakeLists.txt
 2015-06-04 11:27:56 +02:00
Sébastien Loriot 28067d6470 be more permissive to allow some numeric errors 2015-06-02 16:08:51 +02:00
Sébastien Loriot ee3b7d910e check covariance matrices computed are correct (a subset) 2015-06-02 15:48:08 +02:00
Sébastien Loriot 766bda6853 add a test checking points on a feature edge 2015-06-02 09:40:45 +02:00
Sébastien Loriot a214819b8b write points on feature in a file 2015-06-02 09:40:07 +02:00
Sébastien Loriot d74bd22b8a be more tolerant with the output 2015-06-02 08:36:53 +02:00
Jocelyn MEYRON 4faf09ca53 add one test for the VCM 2015-05-29 15:56:46 +02:00
Sébastien Loriot a2f05fb8bb remove warning 2015-05-19 16:43:27 +02:00
Sébastien Loriot bdba9d2c7c do not convolve if nb neighbors <= 0 2015-05-19 16:09:41 +02:00
Sébastien Loriot 0036cc585e add a switch to use constructions in the covariance computation 2015-05-19 15:28:28 +02:00
Sébastien Loriot 115e22ec29 copy input point to be able to use the insert by range of DT 2015-05-19 15:17:53 +02:00
Sébastien Loriot 1a51d32df9 size_t -> std::size_t 2015-05-19 15:06:14 +02:00
Sébastien Loriot 48b41d8610 avoid using a map to get the index of a point and use reserve 2015-05-19 15:04:36 +02:00
Sébastien Loriot d43529c131 save the indexof the point covariance matrix to avoid a lookup in a map 2015-05-19 11:28:01 +02:00
Laurent Rineau a2ffb7d6f8 Merge pull request #80 from afabri/CGAL-array_as_property_map_example-GF 
Add an example for an array as property map
 2015-05-18 11:17:23 +02:00
Andreas Fabri fcfd9a7fa1 Add the example in the user manual, examples/, and examples.txt 2015-05-11 20:53:51 +02:00
Andreas Fabri 754795d560 remove example that revealed the problem 2015-05-11 20:44:50 +02:00
Andreas Fabri b7f9849599 Replace CGAL::get() with CGAL::get_pointee_or_identity() and remove using get:: 2015-04-30 11:31:21 +02:00
Andreas Fabri b8d9925cbc remove target that does not exist 2015-04-30 10:24:53 +02:00
Sébastien Loriot 82e7da19a5 forgot to init the array 
this is a bug in introduced in this commit:
  |--
  |commit 8bc716abf6
  |Author: Sébastien Loriot <sebastien.loriot@cgal.org>
  |Date:   Mon Apr 20 17:59:52 2015 +0200
  |
  |    directly use CGAL::cpp11::array rather than a custom class
  |--

The initialization was done in the default construtor of the custom class
 2015-04-29 23:31:21 +02:00
Sébastien Loriot 97c8a07289 remove experimental code to extract feature polylines that is not working good 
update the demo plugin accordingly
 2015-04-27 21:42:22 +02:00
Sébastien Loriot c9131379e1 accomodate Pierre's review 2015-04-27 14:15:30 +02:00
Andreas Fabri 688e16b26a Add an example that works with built-in array as property map; Add using ::get 2015-04-24 08:55:38 +02:00
Sébastien Loriot 200229dcec eigen foo -> eigenfoo 2015-04-24 08:52:12 +02:00
Sébastien Loriot 90530f83ce greatest -> largest 2015-04-24 08:38:40 +02:00
Sébastien Loriot 3c7c06e539 rename variables 2015-04-23 15:46:59 +02:00
Sébastien Loriot 8adf56212d overlay -> overload 2015-04-23 15:22:40 +02:00
Andreas Fabri 52382276a8 Escape the word Index with '%' 2015-04-23 12:04:35 +02:00
Sébastien Loriot 94d84aebf7 fix compilation issues 2015-04-23 10:30:02 +02:00
Sébastien Loriot 40c5fc574c make Eigen optional through the abstraction of a concept 2015-04-22 19:54:06 +02:00
Sébastien Loriot c990781b78 fix typo 2015-04-22 19:16:21 +02:00
Sébastien Loriot 6b139d10ae move the eigen traits in the CGAL dir 2015-04-22 19:13:45 +02:00
Sébastien Loriot 1e502253cd gather the usage of eigen into a traits 2015-04-22 19:08:46 +02:00
Sébastien Loriot a0d60a94de remove warnings 2015-04-22 18:43:13 +02:00
Sébastien Loriot 7fab19d2df forgot to rename a is_on_edge 2015-04-22 11:44:04 +02:00
Sébastien Loriot f098d8508c use mathjax for the matrix 2015-04-20 18:39:41 +02:00
Sébastien Loriot 27a3531bd6 rename is_on_edge 2015-04-20 18:31:12 +02:00
Sébastien Loriot e312edf41d add doc todo 2015-04-20 18:30:52 +02:00
Sébastien Loriot 8bc716abf6 directly use CGAL::cpp11::array rather than a custom class 2015-04-20 18:11:25 +02:00
Sébastien Loriot e553310940 update of is_edge and vcm_estimate_normals 2015-04-20 17:40:08 +02:00
Sébastien Loriot d7e6b7dfa8 update doc of vcm_compute 2015-04-20 17:10:40 +02:00
Sébastien Loriot f3d774e005 document the function to know whether a point is on a sharp feature 
and hide the function trying to reconstruct edges
 2015-04-20 17:05:42 +02:00
Sébastien Loriot 5dcc322f78 rename include guards 2015-04-20 16:10:55 +02:00
Sébastien Loriot 8b455b2710 add license headers 2015-04-20 16:09:38 +02:00
Sébastien Loriot 4f177e0e65 move internal details to internal directory 2015-04-20 16:06:55 +02:00
Sébastien Loriot 1f871965ed remove warning and compilation issue 2015-04-14 16:39:36 +02:00
Andreas Fabri df7bcccdc0 change several package descriptions 2015-04-14 11:21:16 +02:00
Clement Jamin 1a2a2004f6 Merge branch 'gsoc2013-Point_set_processing_3-fix-swu_cjamin' of ssh://scm.cgal.org/var/git/cgal-gsoc into gsoc2013-Point_set_processing_3-fix-swu_cjamin 2015-02-20 16:56:13 +01:00
Clement Jamin 6183b02f54 Untabify 2015-02-20 16:55:34 +01:00
Shihao Wu 4825fd601b replaced all "CGAL_DEBUG_MODE" with "CGAL_PSP3_VERBOSE" 2015-02-20 15:43:04 +02:00
Shihao Wu 053ee4d507 Fixed the bug of not initializing CGAL::Bbox_3 
In Debug mode, the default CGAL::Bbox_3 is not (0,0,0,0,0,0)
 2015-02-19 17:27:24 +02:00
Shihao Wu ad20bfab93 CGAL::Bbox_3 might behave differently in Debug/Release mode. 2015-02-19 15:41:37 +02:00
Shihao Wu 6fc6e1ef42 Used another way to prevent the neighbor_size from being set too small in EAR. 
If the value given by user is smaller than the default value,
the function will use the default value instead.
 2015-02-19 15:07:09 +02:00
Clement Jamin 60f382034d Updated doc and default value for neighbor radius 2015-02-18 18:00:20 +01:00
Clement Jamin a8ac79dbc4 More doc about neigbor_radius params 2015-02-18 17:46:47 +01:00
Sébastien Loriot c3c749ef0b Merge branch 'Point_set_processing-IO-GF' 
improve doc and IO in examples

  Tested in CGAL-4.6-Ic-126
  Approved by the release manager

Conflicts:
	Point_set_processing_3/examples/Point_set_processing_3/wlop_simplify_and_regularize_point_set_example.cpp
 2015-02-16 10:42:27 +01:00
Sébastien Loriot da7e2e0f1e missing backtick 2015-02-16 08:38:21 +01:00
Sébastien Loriot faa598a9ab prevent the creation of an empty internal namespace in the doc 
trivial bugfix for master
 2015-02-13 15:13:23 +01:00
Sébastien Loriot 66c8fe04de revert part of ef6488a7 that was supposed to be only a typo fix 
|---------------------------------------------------
  |commit ef6488a7c6
  |Author: Andreas Fabri <andreas.fabri@geometryfactory.com>
  |Date:   Thu Feb 5 09:40:06 2015 +0100
  |
  |  fix typo
  |
  |  Approved by the release manager (SL interim)
  |--------------------------------------------------
 2015-02-11 09:29:14 +01:00
Andreas Fabri a3cb5af9b0 more wording fixes for value type 2015-02-06 12:06:14 +01:00
Andreas Fabri 1e99228829 improve wording concerning value_type 2015-02-05 14:53:01 +01:00
Andreas Fabri f1bd6f1627 All examples now read from argv if argc!= 1 2015-02-05 14:29:20 +01:00
Andreas Fabri ef6488a7c6 fix typo 
Approved by the release manager (SL interim)
 2015-02-05 09:40:06 +01:00
Andreas Fabri 2ae1d649c2 capitlize words in \subsection 2015-01-28 16:53:05 +01:00