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Author SHA1 Message Date
ange-clement 8575f53583 Doc upgrades + simplified initial_points_generator parameter + fixed memory leaks 2024-05-02 17:29:23 +02:00
ange-clement 50dfc18d4a Merge branch 'Mesh-3-rework-make-mesh-point-initialization-2-aclement' of https://github.com/ange-clement/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-05-02 17:19:57 +02:00
ange-clement fa6e044414 Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-05-02 14:47:50 +02:00
Laurent Rineau d7ea101231 improve the doc sentences 2024-04-29 16:19:52 +02:00
Laurent Rineau da893f8f8b minor changes 2024-04-29 14:58:10 +02:00
Laurent Rineau 2a2031df3b Rename cgallab to CGALlab 
@janetournois (see https://github.com/CGAL/cgal/pull/8149#issuecomment-2066444180
 2024-04-23 15:09:51 +02:00
Laurent Rineau 621859b526 Rename Polyhedron demo to CGAL Lab 
And announce it in the `CHANGES.md`.
 2024-04-18 12:39:30 +02:00
Jane Tournois 973f8a1f66 make default edge distance be 0 for consistency with other criteria (instead of DBL_MAX) 
rename check_distance_field() to has_distance_field()
 2024-04-16 15:32:59 +02:00
Jane Tournois 3d8346c8e0 fix concept : edge criteria do not belong to MeshCriteria_3 but to MeshCriteriaWithFeatures_3 2024-04-16 14:39:56 +02:00
ange-clement e558f43e01 Added check_distance_field in Edge criteria so that refine_balls() only check edge distance when necessary. 2024-04-04 12:08:13 +02:00
ange-clement b1fb29c22a InitialPointsGenerator parameter 'n' explanation 2024-03-29 17:03:20 +01:00
ange-clement 5b0f1fc4c2 Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-03-29 16:46:24 +01:00
ange-clement e64e28d5ef Made initial_point parameter work with any Range 
With doc and example (
 example "mesh_3D_image_with_initial_points.cpp" has been renamed to  "mesh_3D_image_with_image_initialization.cpp")
 2024-03-29 16:29:07 +01:00
ange-clement 2c9fb5cd4e doc 2024-03-28 14:14:29 +01:00
ange-clement 74b5429160 Changed distance_bound to edge_distance in CHANGES.md + 
doc
 2024-03-27 22:58:57 +01:00
Mael Rouxel-Labbé 5e38ed54df Fix double "Figure" in doc 2024-03-22 17:33:43 +01:00
Laurent Rineau 7b8c90ec3b
Merge branch 'master' into Mesh-3-edge-distance-criterium-aclement 2023-11-16 14:53:25 +01:00
ange-clement 0450b2f0bb Updated example explication + 
Deleted commented code and added const refs
 2023-11-13 13:45:38 +01:00
ange-clement d9f0f258a5 Added initial_points to the parameter doc 2023-11-13 11:53:55 +01:00
ange-clement b01727b3ca Fixed wrong file name 2023-11-10 13:12:39 +01:00
ange-clement ca605fe57f Fix doc build 2023-11-07 16:24:59 +01:00
ange-clement ca7548b341 Removed example + 
Modified example mesh_3D_image_with_custom_initialization to use new API
+ Changed InitialPointsGenerator concept : outputs
std::tuple<Weighted_point_3, int, Index> instead of
std::tuple<Point_3, int, Index>
+ custom initialization will be called even if a feature detector is set
 2023-11-07 15:25:50 +01:00
ange-clement ea11f328d6 Doc update + 
Changed initial_point_generator default parameter +
Fix previous change from pair to tuple
 2023-11-03 17:44:05 +01:00
ange-clement 48a8796248 Corrected changes.md + 
Removed word "distancing" +
Renamed distance_bound_field to distance_field +
Commented example output +
Removed use of sizing_field_param for edge_distance +
Renamed SizingField2 to DistanceField +
Added function query_size
 2023-11-03 12:38:05 +01:00
ange-clement d7f110e428 Changed InitialPointsGenerator concept : 
The points' dimensions are also outputed by the initialisation.
 2023-10-31 15:34:42 +01:00
ange-clement 9d22242b63 Removed useless initialization files 
Removed initialize_triangulation_from_labeled_image
Removed initialize_triangulation_from_gray_image
 2023-10-31 12:21:52 +01:00
ange-clement 15e75d0d04 Small doc fix 2023-10-25 15:08:30 +02:00
ange-clement ec5539eac3 Revision 1 : 
Doc fix +
Deleted default_initial_points_generation() +
Created Construct_initial_points_gray_image.h
 2023-10-25 14:57:48 +02:00
ange-clement 976e73cf89
Update Mesh_3/doc/Mesh_3/Mesh_3.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-10-25 12:09:35 +02:00
ange-clement c014741454 Doc add example + 
Fix for initialize_triangulation_from_gray_image
 2023-10-25 10:35:25 +02:00
Andreas Fabri 1db8ff6e68 Mesh_3::Add handling of *.nii files in one example 2023-10-24 13:11:12 +01:00
ange-clement 7eff272545 Fix doc missing ref 2023-10-19 09:41:31 +02:00
ange-clement 3ac063992f Small doc fix 2023-10-18 14:11:57 +02:00
ange-clement df6d1ed6fd Fix Doc : 
Added Construct_initial_points_labeled_image to doxyfile
 2023-10-18 13:41:03 +02:00
ange-clement 932e8a2b34 Fix Doc missing end of description 2023-10-18 12:46:44 +02:00
ange-clement 23af3eb0e2 Updated doc example snippets + 
Added group "Mesh Initialization Functions" +
Added concept "InitialPointsGenerator" +
Documented model "Construct_initial_points_labeled_image" +
Updated demo parametters +
Fix reneming errors
 2023-10-18 12:38:03 +02:00
ange-clement 6558190eda Fixed doc 2023-10-18 10:37:34 +02:00
ange-clement cb715951d0 Doc changed example + 
Doc added parameter +
Doc make_mesh_3 +
Doc Construct_initial_points_labeled_image header +
Remove unwanted duplicata
 2023-10-18 10:31:19 +02:00
ange-clement 00514ec7dc Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-edge-distance-criterium-aclement 2023-10-10 15:06:02 +02:00
albert-github 6f560fcdce issue #7767 Problem with the documenation of Mesh_3 
removing files that were removed by #7445 but reintroduced by #7395
 2023-10-09 16:03:49 +02:00
ange-clement 891da07cf4 Added CGAL:: to global calls 2023-10-02 09:49:55 +02:00
ange-clement 8cca7b57e3 Updated doc : Concept MeshCriteria_3, and CamelCase for template in CGAL::Mesh_edge_criteria_3 2023-09-28 10:14:30 +02:00
ange-clement 8668b493c8
Update Mesh_3/doc/Mesh_3/Mesh_3.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-09-07 12:11:05 +02:00
ange-clement a23c9d44ca Merge branch 'master' into Mesh-3-edge-distance-criterium-aclement 2023-09-07 10:54:10 +02:00
ange-clement 96eb93c497 minor edge_distance example correction 2023-09-05 10:30:12 +02:00
ange-clement c5cb6646e4 moved edge_distance example after sizing field example 2023-09-05 10:27:55 +02:00
albert-github 93001308f4 Merge branch 'master' into feature/issue_7395 
# Conflicts:
#	Arrangement_on_surface_2/doc/Arrangement_on_surface_2/Concepts/ArrangementPointLocation_2.h
#	Arrangement_on_surface_2/doc/Arrangement_on_surface_2/Concepts/ArrangementVerticalRayShoot_2.h
 2023-08-18 11:10:42 +02:00
Sébastien Loriot 28f904f4e2 Merge remote-tracking branch 'cgal/master' 2023-08-15 07:16:14 +02:00
Sébastien Loriot eada3ee8ca Merge branch 'master' into 'sloriot/CGAL-using_c++17_stl' 2023-08-14 14:19:25 +02:00
Andreas Fabri ba0172a544
Update Mesh_3/doc/Mesh_3/PackageDescription.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-07-27 11:59:30 +02:00
Andreas Fabri 81bbc3e0db
Update Mesh_3/doc/Mesh_3/Mesh_3.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-07-27 11:50:23 +02:00
Andreas Fabri fb3680f8f5
Update Mesh_3/doc/Mesh_3/Mesh_3.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-07-27 11:48:55 +02:00
albert-github ad41766454 issue #7395 Improvement of layout of model relations 
Corrected `cgalModels` to `cgalHasModes` inside `cgalHasNodelsBegin` / `cgalHasModelsEnd`
 2023-07-18 13:23:37 +02:00
albert-github 4e5578d469 issue #7395 Improvement of layout of model relations 
- based on review
 2023-07-15 13:12:15 +02:00
albert-github 301728a8a9 issue #7395 Improvement of layout of model relations 
- Completed the cgalModels part
 2023-07-09 12:43:36 +02:00
albert-github ee2a55279d issue #7395 Improvement of layout of model relations 
- Completed the cgalHasModel part
- corrected spelling of `Has Model` and `Is Model Of` to `Has model` and `Is model of`
 2023-07-06 17:35:34 +02:00
Sébastien Loriot b66afab814 Merge remote-tracking branch 'sloriot/CGAL-using_c++17_stl' into HEAD 2023-07-05 11:29:35 +02:00
Andreas Fabri 28dbd6b8ee allow -> enable 2023-06-24 10:37:39 +01:00
Andreas Fabri 0f4f903f60 merge cgal/master 2023-06-24 10:24:15 +01:00
Ange Clement 99e78ec13a more fixes 2023-06-23 10:58:11 +02:00
Ange Clement f0fdc5cbfa fixes 2023-06-23 10:44:48 +02:00
Ange Clement f3f1069ee7 Added example to the documentation + Corrected edge_distance documentation 2023-06-23 10:34:32 +02:00
Nuno Miguel Nobre 0469f46105 Fix plurals in a number of manuals 2023-06-20 13:29:44 +01:00
Sébastien Loriot 9cdfe70abb Merge remote-tracking branch 'sloriot/CGAL-toward_6.0' 2023-06-15 11:34:09 +02:00
Sébastien Loriot 9a0bdb5d96 boost::variant ---> std::variant 2023-06-15 10:57:10 +02:00
Sébastien Loriot 604dcdc435 boost::optional => std::optional 2023-06-15 10:57:09 +02:00
Mael Rouxel-Labbé 8f0a9dd996 Fix two links 2023-05-31 11:34:37 +02:00
Mael Rouxel-Labbé cab9751987 Merge remote-tracking branch 'cgal/master' into Mesh_3-doc_fixes-GF 2023-05-31 11:30:19 +02:00
Sebastien Loriot b1b02d64fe
P3M3: Non-cubic domains, fixes, improvements (#7062) 
## Summary of Changes

- Add a dummy point generator that is agnostic to the periodic domain's
geometry, allowing P3M3 to handle non-cubic domain.
- Add an example of P3M3 running on polyhedral domains.
- Fix a few issues in SMDS_3's tet soup reading relating to
non-manifoldness + general IO code speed improvements.
- Fix a few issues in P3M3's medit output and always duplicate facets to
reduce the quantity of non-manifoldness occurences.
- Fix an issue with including Mesh_3 headers before P3M3's.
- Fix periodic point projection (for Mesh_3 optimizers) badly computing
the projection direction
- Robustify a handful of P3M3 functions that were using intermediate
constructions rather than the <Point, Offset> API (which uses filtered
predicates and thus yields proper robustness)
- Misc minor code cleaning / modernization

ToDo:
- [x] Check if some medit IO issues are fixed
- [x] Add non-manifoldness flag to read_MEDIT
- [x] Fix value of orthosphere_radius_threshold
- [x] Check calls of insert_dummy_points() (use generic)
- [x] Check doc of P3M3 about cubic domains requirement

Not done:
- [ ] Fix sharp features for periodic polyhedral domains (problems due
to changing weights creating cover change...). Code:
https://gist.github.com/MaelRL/357c52dc04e16a162f13a3c6860a1398; WIP
diff: https://gist.github.com/MaelRL/f98809964acffbacb6d3f42793e2654e

## Release Management

* Affected package(s): `Mesh_3`,  `P3M3`, `P3T3`, `SMDS3`
* Issue(s) solved (if any): Fix #6997, Fix #7214
* Feature/Small Feature (if any): TODO
* License and copyright ownership: no change
 2023-05-30 19:13:45 +02:00
Mael Rouxel-Labbé b3fe07a51d Remove deprecated labeled mesh domains 2023-05-26 13:47:15 +02:00
Mael Rouxel-Labbé 97097f1f04 misc fixes 2023-05-26 13:19:19 +02:00
Mael Rouxel-Labbé 525338eec2 Haronize Gt/GT/etc. 2023-05-26 12:52:35 +02:00
Mael Rouxel-Labbé abad43a63d Add missing doc dependency 2023-05-25 15:19:36 +02:00
Mael Rouxel-Labbé 6d3d60c6e2 Do not document Mesh_3 classes' members that are not explicitely documented 2023-05-25 15:19:13 +02:00
Mael Rouxel-Labbé 13f8044027 Remove more (needless) doc appearances of TriangleAccessor 2023-05-25 14:56:16 +02:00
Mael Rouxel-Labbé bc45a00194 Undocument TriangleAccessor_3 and CGAL::Triangle_accessor_3 as they are unused 2023-05-25 12:08:01 +02:00
Andreas Fabri 0c29013c3d Polish 2023-05-23 09:58:41 +01:00
Andreas Fabri 79ce772e71 various 2023-05-22 18:46:09 +01:00
Sébastien Loriot 78ab4fab70 add special cases for header only packages 2023-05-22 18:24:06 +02:00
Andreas Fabri 585dc0f424 various 2023-05-22 13:36:24 +01:00
Andreas Fabri b1137e9d83 various 2023-05-22 12:19:44 +01:00
Andreas Fabri b6531a76d1 fixes 2023-05-16 16:22:48 +01:00
Andreas Fabri c97ce3ee55 Remove doc files 2023-05-16 10:30:03 +01:00
Andreas Fabri b3e2beddb4 merge cgal/master 2023-05-16 10:02:36 +01:00
Andreas Fabri f1780e39dd Mesh_3: Move doxygen into header file 2023-05-16 09:32:15 +01:00
Andreas Fabri 7171de7b03 Mesh_3: Move doxygen into header file 2023-05-15 21:59:09 +01:00
Andreas Fabri a940523882 Mesh_3: Move doxygen into header file 2023-05-15 15:52:35 +01:00
Jane Tournois 73a7d4ff09 Merge remote-tracking branch 'cgal/master' into Mesh_3-min_size-jtournois 
# Conflicts:
#	Installation/CHANGES.md
#	Polyhedron/demo/Polyhedron/Plugins/Mesh_3/Mesh_3_plugin.cpp
#	STL_Extension/include/CGAL/STL_Extension/internal/parameters_interface.h
 2023-05-05 09:17:33 +02:00
Mael 532b82cb9b
Merge branch 'master' into P3M3-Undocumented_polyhedral_domain_example-GF 2023-05-04 17:28:47 +02:00
Laurent Rineau 628d8ae43d Merge pull request #7307 from janetournois/Mesh_3-sizing_field_with_aabb_tree-GF 
Mesh_3 - Document Sizing_field_with_aabb_tree
 2023-05-04 17:22:59 +02:00
Jane Tournois b76f640a41 Merge branch 'Mesh_3-edge_min_size-GF' into Mesh_3-min_size-jtournois 
# Conflicts:
#	Mesh_3/test/Mesh_3/CMakeLists.txt
#	Polyhedron/demo/Polyhedron/Plugins/Mesh_3/Meshing_dialog.ui
 2023-04-24 13:59:48 +02:00
Jane Tournois e30ccd2cc5 Merge branch 'Mesh_3-add_minimal_size_criterion_new-jtournois' into Mesh_3-min_size-jtournois 2023-04-24 12:56:40 +01:00
Jane Tournois 8e98895678 update concept MeshEdgeCriteria_3 2023-04-17 16:46:38 +02:00
Laurent Rineau 824976a003 Merge pull request #7236 from albert-github/feature/issue_7231 
issue #7231 Improvement of layout of refines relations.
 2023-04-17 10:14:01 +02:00
albert-github 8a0b21461d Unexpected backtick 
- Corrected some more redundant / missing backticks
- correctes a spelling error (Boolean_set_operations_2/doc/Boolean_set_operations_2/CGAL/Boolean_set_operations_2/Gps_default_dcel.h)
 2023-04-11 17:38:37 +02:00
Jane Tournois 3e3f66f75d Merge remote-tracking branch 'cgal/master' into Mesh_3-add_minimal_size_criterion_new-jtournois 
# Conflicts:
#	Polyhedron/demo/Polyhedron/Plugins/Mesh_3/Mesh_3_plugin.cpp
 2023-04-06 12:04:47 +02:00
Jane Tournois 789a4c337d add link and remove CGAL:: 2023-04-03 11:18:06 +02:00
Jane Tournois ed3a6f966f
Apply suggestions from code review 
Co-authored-by: Andreas Fabri <andreas.fabri@geometryfactory.com>
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2023-03-30 11:34:50 +02:00
Jane Tournois ac5ccbd62f Merge remote-tracking branch 'cgal/master' into Mesh_3-sizing_field_with_aabb_tree-GF 
# Conflicts:
#	Mesh_3/doc/Mesh_3/PackageDescription.txt
 2023-03-23 13:53:48 +01:00
Jane Tournois b52913b6cc Merge remote-tracking branch 'cgal/master' into Mesh_3-edge_min_size-GF 
# Conflicts:
#	Mesh_3/doc/Mesh_3/Doxyfile.in
 2023-03-20 14:07:19 +01:00