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Author SHA1 Message Date
Jane Tournois 5771547e36 replace typedef's by using's 2024-07-23 10:56:46 +02:00
Jane Tournois a93f78d8ad remove debug macros 2024-07-23 10:18:40 +02:00
Jane Tournois 47b5f73a96 document example weighted image + feature detection 2024-07-23 10:18:27 +02:00
Jane Tournois 5d814aee2a remove ref (can become invalid) 2024-06-25 15:16:07 +02:00
Mael Rouxel-Labbé 67aba3fefe Merge remote-tracking branch 'cgal/master' into gsoc2022-isosurface 2024-06-20 10:18:49 +02:00
Laurent Rineau 089cb17bcf
Poisson: fix dependencies (#8282) 2024-06-13 12:55:34 +02:00
Laurent Rineau 6f4b598b6a Merge pull request #8278 from albert-github/feature/bug_spell_20240511 
Spelling correction
 2024-06-13 12:48:43 +02:00
Sébastien Loriot 86866e232e remove Surface_mesher from doc deps 2024-06-12 20:34:54 +02:00
Laurent Rineau 32893b91c0 Merge pull request #8263 from lrineau/CGAL-update_minimal_cmake-GF 
cmake_minimum_required(VERSION 3.12...3.29)
 2024-06-12 10:06:12 +02:00
Laurent Rineau d5aa8b1a44 Merge pull request #8268 from janetournois/Mesh_3-fix_concept-jtournois 
Mesh_3 - fix concept `MeshFacetCriteria_3`
 2024-06-12 10:06:08 +02:00
Laurent Rineau f3b409a807 require VTK version 9.0 or later 2024-06-11 15:57:25 +02:00
albert-github c35a0a7f11 Spelling correction 
Spelling correction due to updated dictionary.
(dictionary was updated after the previous spelling correction :-( )
 2024-06-11 10:12:12 +02:00
Jane Tournois 05c3fc9e94 update CMakeLists.txt for recent VTK 2024-06-11 10:00:36 +02:00
Laurent Rineau 5b003a7808 Merge pull request #8246 from albert-github/feature/bug_spell_20240531 
Spelling corrections
 2024-06-10 18:47:22 +02:00
Jane Tournois 8d6d934395 convert tuple to struct for Facets_erase_counters 2024-06-10 15:52:09 +02:00
Jane Tournois accfc2aa31 convert tuple to struct for Move 2024-06-10 15:51:31 +02:00
Jane Tournois 8e39809c58 remove more tuples 2024-06-07 17:38:02 +02:00
Jane Tournois 7be4da73a3 remove useless tuple 2024-06-07 17:37:34 +02:00
Jane Tournois 986b596d10 Merge remote-tracking branch 'cgal/master' into Mesh_3-avoid_tuples-jtournois 
# Conflicts:
#	Mesh_3/include/CGAL/Mesh_3/Refine_facets_3.h
 2024-06-07 15:48:31 +02:00
Jane Tournois 4d486527d2 fix doc 2024-06-07 15:18:57 +02:00
Laurent Rineau 3a223ebd1e cmake_minimum_required(VERSION 3.12...3.29) 2024-06-06 20:19:44 +02:00
Jane Tournois 3cf86606d8 avoid compiler warning 2024-06-04 08:55:48 +02:00
Jane Tournois bb0c3f22f6 use typedefs 2024-06-04 08:52:08 +02:00
Laurent Rineau 212c6bc5ce Merge pull request #8241 from lrineau/Mesh_3-add_a_scope_after_if-GF 
Mesh_3: add a scope after if(...)
 2024-06-03 17:40:24 +02:00
Jane Tournois b2a679ee78 typedefs 2024-05-31 19:05:38 +02:00
albert-github 36c8b7589d Spelling corrections 
Last batch (for now) of spelling corrections in doxygen and normal comments
 2024-05-31 19:05:34 +02:00
Jane Tournois 5b1a406dcc use c++17 to simplify code 2024-05-31 09:38:20 +02:00
Jane Tournois fe6e71724b replace tuple with struct to improve readability 2024-05-30 15:33:29 +01:00
Jane Tournois c0f53c4a3e avoid using the get<i>(tuple) API, hardly readable 2024-05-30 15:33:22 +01:00
Laurent Rineau c538ff16c2 Mesh_3: add a scope after if(...) 2024-05-30 15:24:19 +02:00
Mael Rouxel-Labbé 4ba0ec0421 Merge remote-tracking branch 'cgal/master' into Mesh_3-update_benchmark-jtournois 2024-05-29 12:57:39 +02:00
Sebastien Loriot d06a57a292
Mesh_3 edge_distance criterion : an upper bound for the distances of the feature edge to the input feature (#7532) 
## Summary of Changes

Fixes issue #5110.
Adds a edge_distance criteria to the mesh generation process.
This criteria is an upper bound for the distance from the edge to the 1D
feature.

## Release Management

* Affected package(s): Mesh_3
* Issue(s) solved (if any): fix #5110
* Link to small feature page :
[Mesh_3_edge_distance_criteria](https://cgal.geometryfactory.com/CGAL/Members/wiki/Features/Small_Features/Mesh_3_edge_distance_criteria)
* Link to compiled documentation
[*here*](https://cgal.github.io/7532/v1/Manual/index.html):
*
[Mesh_edge_criteria_3](https://cgal.github.io/7532/v1/Mesh_3/classCGAL_1_1Mesh__edge__criteria__3.html)
  * [Mesh_criteria_3](https://cgal.github.io/7532/v1/Mesh_3)
 2024-05-27 10:58:15 +02:00
Sebastien Loriot abe1bba8bd
CGAL improvement backported from CDT_3 branch (#8170) 
## Summary of Changes

Important various fixes and improvements, from an experimental branch of
mine about CDT_3.

- <s>remove CMake warnings about `VTK_USE_FILE`</s> (our testsuite tests
with [VTK-8.2](https://docs.vtk.org/en/latest/release_details/8.2.html),
whereas
[VTK-9.0](https://docs.vtk.org/en/latest/release_details/9.0.html) was
released four years ago).
- make `Circulator_from_container` compatible with ranges (instead of
just containers)
- `Hash_map` is move-constructible and -assignable
- add preliminary support for C++20 concepts and `<format>`
- [x] add `Compare_angle_3(Point_3, Point_3, Point_3, Point_3, Point_3,
Point_3)` (with six points) **TODO: needs doc**... will be handled later
in issue #8219
- [x] **breaking changes:** add `Compare_xy_2` to
`TriangulationTraits_2` <s>TODO: needs announcement</s>
- fix `Compact_container` time stamp feature
- [x] commits from #7410 **That is probably a problem, to be fixed.**
**fixed in #7410 and then my the merge
70464ea107**
- add `CGAL::Scope_exit`, `CGAL::make_scope_exit`, for CGAL developers
(undocumented)
- add an overload of `make_sorted_pair` with only one pair-like argument
- improve `CGAL::IO::Output_ref` and `oformat`
- perf improvements in
`TDS_3/include/CGAL/Triangulation_data_structure_3.h` (`is_edge` is 7
times faster)
- <s>perf improvement in
`Triangulation_2/include/CGAL/Triangulation_2/internal/Polyline_constraint_hierarchy_2.h`
(with the use of `unordered_flat_map` from Boost>=1.80</s>
- less filter failures in `Triangulation_segment_cell_iterator_3`
- add `Triangulation_3::is_facet(u, v, w)` (without `, c, i, j, k`)

## Release Management

* Affected package(s): Installation, T_2, TDS_2, T_3, TDS_3, SMDS_3,
Kernel, STL_Extension, Stream_support
* Feature/Small Feature (if any):
* License and copyright ownership: maintenance by GeometryFactory
 2024-05-26 17:48:10 +02:00
Sebastien Loriot afe7f90a73
Mesh_3::Add handling of *.nii files in one example (#7823) 
## Summary of Changes

While the Polyhedron demo can read `*.nii` files there is no example in
`examples/Mesh_3/`.
This PR adds the functionality to the example that uses vtk to read
DICOM data.

This is triggered by [this
question](https://stackoverflow.com/questions/77331075/is-there-an-easy-way-to-convert-from-nifti-nii-image-format-to-inr)
on stackoverflow.

- [ ] Support of `*.nrrd` format
- [ ] example for segmented images
- [ ] Add example data for the file formats.

## Release Management

* Affected package(s): Mesh_3
* License and copyright ownership: unchanged
 2024-05-26 17:45:48 +02:00
Laurent Rineau 0c0b22ba92 add tests and assertions for the timestamper 2024-05-23 16:35:54 +02:00
Laurent Rineau df28ddc43a Revert "Fix CMake warning: remove usage of VTK_USE_FILE" 
This reverts commit f39b90670b.
 2024-05-22 12:55:43 +02:00
Laurent Rineau 70464ea107 Merge remote-tracking branch 'afabri/STL_extension-Fix_Prevent_deref-GF' into pr/lrineau/8170 2024-05-21 18:55:11 +02:00
Laurent Rineau 022b19d3ca Merge pull request #8057 from sloriot/AABB_tree-2d_and_3d 
Updating the AABB-tree to work in both 2D and 3D
 2024-05-15 16:12:19 +02:00
Jane Tournois 47b74e419d the nb of vertices in parallel mode has a pretty large variability 
(from 745 to 893 in my experiments)
so testing their number wrt a reference value does not make much sense

This commit changes to test not to test meshing without comparing nbv and nbf
in parallel mode
 2024-05-10 16:00:15 +02:00
Jane Tournois 1638c4b6fa warning unused parameters 2024-05-07 10:22:42 +02:00
Jane Tournois 29de7aceaa fix compilation of test 2024-05-03 14:28:21 +02:00
ange-clement 8575f53583 Doc upgrades + simplified initial_points_generator parameter + fixed memory leaks 2024-05-02 17:29:23 +02:00
ange-clement 50dfc18d4a Merge branch 'Mesh-3-rework-make-mesh-point-initialization-2-aclement' of https://github.com/ange-clement/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-05-02 17:19:57 +02:00
ange-clement fa6e044414 Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-05-02 14:47:50 +02:00
Laurent Rineau 2813d53c7f other changes I forgot to commit 2024-04-29 16:47:15 +02:00
Laurent Rineau d7ea101231 improve the doc sentences 2024-04-29 16:19:52 +02:00
Jane Tournois 1bbcc40ee3 Merge branch 'Mesh-3-edge-distance-criterium-aclement' of https://github.com/ange-clement/cgal into Mesh-3-edge-distance-criterium-aclement 2024-04-29 15:16:42 +02:00
Jane Tournois fe09beb53e fix template parameters doc 2024-04-29 15:15:46 +02:00
Laurent Rineau da893f8f8b minor changes 2024-04-29 14:58:10 +02:00
Laurent Rineau f39b90670b Fix CMake warning: remove usage of VTK_USE_FILE 
Backport: master, 5.5.x, 5.4.x
 2024-04-26 13:54:44 +02:00
Laurent Rineau 07eb230ed8 Merge pull request #8149 from lrineau/cgallab-cont 
Rename Polyhedron demo to CGAL Lab everywhere
 2024-04-25 11:30:08 +02:00
Laurent Rineau 2a2031df3b Rename cgallab to CGALlab 
@janetournois (see https://github.com/CGAL/cgal/pull/8149#issuecomment-2066444180
 2024-04-23 15:09:51 +02:00
Laurent Rineau 67466144bb Merge pull request #8139 from janetournois/Mesh_3-revert_encroachment_loop-jtournois 
Mesh_3 - revert encroachment rule modification, and fix infinite refinement
 2024-04-22 14:53:50 +02:00
Laurent Rineau 621859b526 Rename Polyhedron demo to CGAL Lab 
And announce it in the `CHANGES.md`.
 2024-04-18 12:39:30 +02:00
Jane Tournois 7a8075ebd9 comments 2024-04-16 16:54:21 +02:00
Jane Tournois 973f8a1f66 make default edge distance be 0 for consistency with other criteria (instead of DBL_MAX) 
rename check_distance_field() to has_distance_field()
 2024-04-16 15:32:59 +02:00
Jane Tournois 3d8346c8e0 fix concept : edge criteria do not belong to MeshCriteria_3 but to MeshCriteriaWithFeatures_3 2024-04-16 14:39:56 +02:00
Laurent Rineau cf01bdc179 simplify the snippets 2024-04-15 15:37:26 +02:00
ange-clement 3cb583ade7 Added nii image "squircle.nii" + 
Updated example to work with a default dataset.
 2024-04-12 12:16:25 +02:00
Jane Tournois a8debb0d2d Revert "Fix sometimes creating holes in the C3T3" 
This reverts commit 06d272169f.

There may be an inconsistency between exact and inexact computations,
in the facet encroachment rule

This code was leading to a local infinite refinement loop during cells refinement
 2024-04-11 14:16:41 +02:00
Sébastien Loriot 2701314055 fix warnings 2024-04-09 13:53:47 +02:00
ange-clement 6e8dacff2b Fixed test 2024-04-05 14:21:39 +02:00
ange-clement 37798b73d7 Optimisation in refine_balls : added a is_edge_in_complex boolean, the check is processed once instead of twice. 2024-04-04 12:42:41 +02:00
ange-clement e558f43e01 Added check_distance_field in Edge criteria so that refine_balls() only check edge distance when necessary. 2024-04-04 12:08:13 +02:00
ange-clement b1fb29c22a InitialPointsGenerator parameter 'n' explanation 2024-03-29 17:03:20 +01:00
ange-clement ae0f8f37c9 Finished Merge 2024-03-29 16:49:33 +01:00
ange-clement 5b0f1fc4c2 Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-rework-make-mesh-point-initialization-2-aclement 2024-03-29 16:46:24 +01:00
ange-clement e64e28d5ef Made initial_point parameter work with any Range 
With doc and example (
 example "mesh_3D_image_with_initial_points.cpp" has been renamed to  "mesh_3D_image_with_image_initialization.cpp")
 2024-03-29 16:29:07 +01:00
ange-clement b2203b4c52 Doc + cleanup 2024-03-28 15:50:53 +01:00
ange-clement 2c9fb5cd4e doc 2024-03-28 14:14:29 +01:00
ange-clement 3cfea618e5 as in PR #7844, removed _sizing_field parameter for edge_distance. 2024-03-28 11:39:33 +01:00
ange-clement 70fd9113e7 Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-edge-distance-criterium-aclement 2024-03-28 11:36:39 +01:00
ange-clement 74b5429160 Changed distance_bound to edge_distance in CHANGES.md + 
doc
 2024-03-27 22:58:57 +01:00
Sébastien Loriot 5254404517 Merge remote-tracking branch 'cgal/master' into HEAD 2024-03-27 22:25:41 +01:00
Sven Oesau f0d32fe869
Merge branch 'master' into AABB_tree-2d_and_3d 2024-03-26 16:03:19 +01:00
Sven Oesau 65be6133d8 removing deprecated AABB types 2024-03-26 15:56:45 +01:00
Laurent Rineau bffa8f213e Merge pull request #8072 from janetournois/Mesh_3-use_one_step_loop-jtournois 
Mesh_3 - fix mesher using the `one_step()` loop

# Conflicts:
#	Mesh_3/include/CGAL/Mesh_3/Triangulation_helpers.h
 2024-03-26 10:21:00 +01:00
Mael Rouxel-Labbé 5e38ed54df Fix double "Figure" in doc 2024-03-22 17:33:43 +01:00
Jane Tournois ad98ab16b7 unused argc, argv 2024-03-22 10:22:48 +01:00
Jane Tournois 644d6493eb nearest_power_vertex() does not work on an empty triangulation 2024-03-21 16:33:26 +01:00
Jane Tournois 44e176b88a
unused typedef 
Co-authored-by: Sebastien Loriot <sloriot.ml@gmail.com>
 2024-03-21 16:13:30 +01:00
Jane Tournois 5b004ffbe6 add a test for one_step() loop with features on tiny data 2024-03-14 17:27:47 +01:00
Jane Tournois 80fd8759dd avoid insertion of points inside protecting balls, during initialization step 2024-03-14 16:40:28 +01:00
Jane Tournois 4e81649dd9 use set_surface_only() to be more explicit 2024-03-14 16:32:29 +01:00
Jane Tournois d085faba0c remove duplicate 2024-03-14 16:31:11 +01:00
Jane Tournois 83c88da327 move clear_cells_and_facets_from_c3t3() inside the constructor of Mesher_3 
to make sure the input c3t3 is fully clean before starting refinement
 2024-03-14 16:28:46 +01:00
Andreas Fabri eb49100a96 Replace deprecated classes 2024-03-05 07:08:51 +00:00
Sébastien Loriot 910945eb5f undo dependency changes + always use core if not disabled 2024-02-27 16:19:28 +01:00
Sébastien Loriot 3b30756cd3 do not depend on CGAL_Core 2024-02-27 14:46:18 +01:00
Andreas Fabri e4558a4d4b Merge branch 'master' into CORE-boost_mp_number-GF 2024-02-23 17:04:37 +01:00
Laurent Rineau a32899f73c Merge pull request #8029 from janetournois/Mesh_3-edge_min_size-jtournois 
Mesh_3 with `edge_min_size` - make uses of `curve_segment_length()` consistent
 2024-02-16 18:03:13 +01:00
Laurent Rineau d9ebccd627 Merge pull request #8030 from janetournois/Mesh_3-perturber_doc-jtournois 
Mesh_3 - fix perturber doc
 2024-02-16 18:03:10 +01:00
Laurent Rineau f407ea44ee Merge pull request #8029 from janetournois/Mesh_3-edge_min_size-jtournois 
Mesh_3 with `edge_min_size` - make uses of `curve_segment_length()` consistent
 2024-02-16 18:02:36 +01:00
Sébastien Loriot 0e3074689b fix warning 2024-02-14 11:03:10 +01:00
Jane Tournois 51ebe945de fix the perturber doc, that was mixed with exuder (in 5.5, doc is valid) 2024-02-12 12:12:10 +01:00
Jane Tournois 34514d33f7 factorize code using curve_segment_length to one function 
and use it everywhere
 2024-02-12 11:46:33 +01:00
Sebastien Loriot caecbe29c7
Replace boost::mpl (#7813) 
- `boost::mpl::if_` --> `std::conditional`
- `boost::enable_if` -> `std::enable_if`
- `boost::mpl::and_` -> `&&`
- `boost::mpl::or_` -> `||`
- `boost::constant::bool_` -> `std::bool_constant`
- ...
 2023-12-26 17:33:36 +01:00
Sébastien Loriot 15aa810876 Merge remote-tracking branch 'cgal/5.6.x-branch' 2023-12-22 17:16:49 +01:00
Sebastien Loriot eb659137e6
Mesh_3 - `edge_min_size` may cause hanging (#7863) 
## Summary of Changes

When the criterion `edge_min_size` is set, the graph of features is
likely to be invalid or at least inconsistent with the input graph.
Checking its topology does not make any sense and could lead to hanging
when trying to compute polyline feature lengths (because it's trying to
walk on different curves, jumping from one to the other, etc).

This PR disables the check-features-after-protect step when
`edge_min_size` is used, since we anyway do not expect the feature graph
to be exactly matching the one of the input.

## Release Management

* Affected package(s): Mesh_3
* License and copyright ownership: unchanged
 2023-12-22 17:15:37 +01:00
Jane Tournois a66e78a672 when curves topology is valid, use curve_segment_length 2023-12-15 15:52:02 +01:00
Jane Tournois 3ef2ce9163 check_and_repopulate_edges() reactivated with minimal size 
disabling it may give too bad results
change the arc_length computation when minimal size is used, instead,
by approximating it by the segment length
 2023-12-15 14:44:33 +01:00
Jane Tournois 7fa2db8dfc add helper function minimal_weight() 2023-12-14 19:01:57 +01:00
Jane Tournois 85b8da120d constify more 2023-12-14 15:36:57 +01:00
Jane Tournois 54677b388c set default minimal_size_ to -1 and add helper function to check if it is set 2023-12-14 15:35:06 +01:00
Laurent Rineau ef881a1aa9 Merge pull request #7844 from janetournois/Mesh_3-remove_unused_criteria-GF 
Mesh_3 - `Mesh_criteria_3` cleaning
 2023-12-11 13:56:26 +01:00
Laurent Rineau b4820031eb Merge pull request #7911 from sloriot/M3-params_errors 
Mesh_3: Fix copy/paste errors in parameters
 2023-12-11 13:54:47 +01:00
Mael Rouxel-Labbé ef2a7b389f Do not tolerate degenerate faces in inputs 2023-12-11 12:28:19 +01:00
Mael Rouxel-Labbé 17356404e0 Fix typo 2023-12-11 12:14:30 +01:00
Mael Rouxel-Labbé 6a8fc7e093 Avoid some segfaults 2023-12-11 12:08:31 +01:00
Mael Rouxel-Labbé ed14d04a61 Add benchmarking and charting scrips 2023-12-08 17:17:21 +01:00
Mael Rouxel-Labbé 7ecdabf6c3 Add benchmark_mesh_3.cpp 2023-12-08 17:16:05 +01:00
Mael Rouxel-Labbé dc38d13066 Fix a few performance data exports 2023-12-07 20:56:52 +01:00
Mael Rouxel-Labbé d715a658a0 Minor indentation fix 2023-12-07 20:56:30 +01:00
Mael Rouxel-Labbé 024651390f Add the number of threads to the conccurent mesher config 2023-12-07 20:55:15 +01:00
Mael Rouxel-Labbé 27633e2f44 Fix doc 2023-12-07 10:13:58 +01:00
Mael Rouxel-Labbé b4d465ce85 Add a test 2023-12-05 22:34:00 +01:00
Mael Rouxel-Labbé 9c4117162b Clean CMakeLists.txt 2023-12-01 10:45:21 +01:00
Mael Rouxel-Labbé 2e8bfb18f8 Get rid of MSVC-specific precompiled header mechanisms 2023-12-01 10:40:44 +01:00
Mael Rouxel-Labbé cf7c6681f9 Merge remote-tracking branch 'cgal/master' into Mesh_3-update_benchmark-jtournois 2023-12-01 10:09:07 +01:00
Jane Tournois 0aa0242979 fix tbb new API, and add total refinement time 2023-12-01 10:01:54 +01:00
Jane Tournois 8a4c99f19b remove unused variables 
now there is only one possible sizing definition left, they have
become useless
 2023-11-30 09:53:04 +01:00
Laurent Rineau 0744eba4bf Merge pull request #7754 from janetournois/Mesh_3-manifold_and_min_size-jtournois 
Mesh_3 - use `manifold()` and `facet_min_size` together
 2023-11-29 17:23:25 +01:00
Laurent Rineau 95b83b1214 Merge pull request #7845 from puneetmatharu/patch-cgal-dont-override-build-testing 
Patch usage of BUILD_TESTING to handle the case that CGAL is a subproject
 2023-11-29 17:22:54 +01:00
Laurent Rineau eb59cc6105 Merge remote-tracking branch 'cgal/master' into Installation-ITK-jtournois 2023-11-24 10:50:26 +01:00
Jane Tournois 33b9d44797 update files location that are in Data/data/meshes 2023-11-24 10:42:20 +01:00
Jane Tournois 0b94f02516 upate the use of TBB with new API 2023-11-24 10:38:32 +01:00
Laurent Rineau 9262c6a8b6 Re-add CGAL_ITK_support.cmake 
That will allow to be compatible with ITK version 4.13 and 5.x.
 2023-11-23 17:25:18 +01:00
Jane Tournois 7fdc36dbbe remove *_sizing_field criteria from test 2023-11-23 15:48:46 +01:00
Jane Tournois 4f2ec8abe0 increase facet size 2023-11-17 16:21:37 +01:00
Jane Tournois 850c99e0f2 make data match exactly at vertices 
with no degenerate border edges
 2023-11-17 16:18:04 +01:00
Laurent Rineau 7b8c90ec3b
Merge branch 'master' into Mesh-3-edge-distance-criterium-aclement 2023-11-16 14:53:25 +01:00
Sébastien Loriot cfac63f156 Merge remote-tracking branch 'cgal/master' into HEAD 2023-11-16 11:35:35 +01:00
Jane Tournois e4e13e2f57 do not check the graph of features after protection when minimal_size is set 
when minimal_size is set, the graph of features is likely to be invalid

or at least inconsistent with the input graph
so checking its topology does not make any sense and could lead to
- assertions failing in debug mode,
- hanging in release mode
 2023-11-14 12:28:18 +01:00
ange-clement 0450b2f0bb Updated example explication + 
Deleted commented code and added const refs
 2023-11-13 13:45:38 +01:00
Jane Tournois 0b73361226 remove CGAL_ITK_support.cmake 
and adapt the CMakeLists that were using it
 2023-11-13 12:47:39 +01:00
ange-clement d9f0f258a5 Added initial_points to the parameter doc 2023-11-13 11:53:55 +01:00
ange-clement ec7a6ac876 Added meshing parameter : initial_points 2023-11-10 17:06:04 +01:00
ange-clement b01727b3ca Fixed wrong file name 2023-11-10 13:12:39 +01:00
ange-clement ca605fe57f Fix doc build 2023-11-07 16:24:59 +01:00
ange-clement ca7548b341 Removed example + 
Modified example mesh_3D_image_with_custom_initialization to use new API
+ Changed InitialPointsGenerator concept : outputs
std::tuple<Weighted_point_3, int, Index> instead of
std::tuple<Point_3, int, Index>
+ custom initialization will be called even if a feature detector is set
 2023-11-07 15:25:50 +01:00
ange-clement ea11f328d6 Doc update + 
Changed initial_point_generator default parameter +
Fix previous change from pair to tuple
 2023-11-03 17:44:05 +01:00
ange-clement 48a8796248 Corrected changes.md + 
Removed word "distancing" +
Renamed distance_bound_field to distance_field +
Commented example output +
Removed use of sizing_field_param for edge_distance +
Renamed SizingField2 to DistanceField +
Added function query_size
 2023-11-03 12:38:05 +01:00
Jane Tournois c85711d58f test cleaning 2023-11-03 09:50:25 +01:00
Puneet Matharu 7944441068 Patch usage of BUILD_TESTING to handle the case that CGAL is a subproject. 2023-11-02 18:09:03 +00:00
Jane Tournois 5b6bf12745 use get_parameter_reference for all the possibly-field parameters 2023-11-02 14:39:34 +01:00
Jane Tournois 093660ce43 remove unused and undocumented criterion cell_radius_edge 2023-11-02 14:27:31 +01:00
Jane Tournois 361c5c5009 remove all the _sizing_field parameters that have never been used 
they were removed from the documentation before being merged in the master branch
see SVN commit
1614a89e32
 2023-11-02 14:13:07 +01:00
Jane Tournois f76161be3c store squared min_size instead of min_size 2023-11-02 09:27:27 +01:00
Laurent Rineau 51627e3505 Merge remote-tracking branch 'cgal/master' into CGAL-Qt6-GF 
# Conflicts:
#	GraphicsView/demo/Bounding_volumes/CMakeLists.txt
 2023-11-01 20:59:44 +01:00
ange-clement d7f110e428 Changed InitialPointsGenerator concept : 
The points' dimensions are also outputed by the initialisation.
 2023-10-31 15:34:42 +01:00
ange-clement 9d22242b63 Removed useless initialization files 
Removed initialize_triangulation_from_labeled_image
Removed initialize_triangulation_from_gray_image
 2023-10-31 12:21:52 +01:00
Jane Tournois 3204b527e8 reduce perturb_mesh_3 angle bound to fit timeout on more platforms 2023-10-30 12:11:24 +01:00
ange-clement 15e75d0d04 Small doc fix 2023-10-25 15:08:30 +02:00
ange-clement ec5539eac3 Revision 1 : 
Doc fix +
Deleted default_initial_points_generation() +
Created Construct_initial_points_gray_image.h
 2023-10-25 14:57:48 +02:00
ange-clement 976e73cf89
Update Mesh_3/doc/Mesh_3/Mesh_3.txt 
Co-authored-by: Jane Tournois <janetournois@users.noreply.github.com>
 2023-10-25 12:09:35 +02:00
ange-clement c014741454 Doc add example + 
Fix for initialize_triangulation_from_gray_image
 2023-10-25 10:35:25 +02:00
Jane Tournois 4bbbc482cf reduce the target dihedral angle to fit in the testsuite timeout 2023-10-24 17:21:29 +02:00
Andreas Fabri 0e9905c490 Fixes 2023-10-24 14:43:24 +01:00
Andreas Fabri 1db8ff6e68 Mesh_3::Add handling of *.nii files in one example 2023-10-24 13:11:12 +01:00
Jane Tournois 99c0df22ad Merge remote-tracking branch 'cgal/master' into Mesh_3-manifold_and_min_size-jtournois 
# Conflicts:
#	Polyhedron/demo/Polyhedron/resources/shader_c3t3.frag
 2023-10-24 12:55:09 +02:00
ange-clement 7eff272545 Fix doc missing ref 2023-10-19 09:41:31 +02:00
ange-clement 6955dbdd5a Doc operator() 
of Construct_initial_points_labeled_image
 2023-10-18 15:20:42 +02:00
ange-clement 3ac063992f Small doc fix 2023-10-18 14:11:57 +02:00
ange-clement df6d1ed6fd Fix Doc : 
Added Construct_initial_points_labeled_image to doxyfile
 2023-10-18 13:41:03 +02:00
ange-clement 932e8a2b34 Fix Doc missing end of description 2023-10-18 12:46:44 +02:00
ange-clement 23af3eb0e2 Updated doc example snippets + 
Added group "Mesh Initialization Functions" +
Added concept "InitialPointsGenerator" +
Documented model "Construct_initial_points_labeled_image" +
Updated demo parametters +
Fix reneming errors
 2023-10-18 12:38:03 +02:00
ange-clement 4ae4425fbc fixed missing typename in tests 2023-10-18 11:17:17 +02:00
ange-clement 91d66d0bfc Renamed Construct_initial_points_from_labeled_image.h 2023-10-18 11:01:50 +02:00
ange-clement 6558190eda Fixed doc 2023-10-18 10:37:34 +02:00
ange-clement cb715951d0 Doc changed example + 
Doc added parameter +
Doc make_mesh_3 +
Doc Construct_initial_points_labeled_image header +
Remove unwanted duplicata
 2023-10-18 10:31:19 +02:00
ange-clement c232929fd1 Fix error when no initial_points_generator 2023-10-17 16:12:48 +02:00
ange-clement 4ee4dff969 Doc change + small fix 2023-10-17 16:02:28 +02:00
ange-clement f2af65444d Use parameters instead of template 
Allows easier initialisation
 2023-10-17 15:39:42 +02:00
ange-clement 9fc7230e64 Fix CI 2023-10-16 14:04:45 +02:00
ange-clement 0d0c1f3213 Fix CI 2023-10-16 13:26:20 +02:00
ange-clement bec5358ff1 Fix CI 2023-10-16 12:39:04 +02:00
Laurent Rineau 98a6bf7934 Merge pull request #7744 from lrineau/CGAl-fix_IO_oformat_iformat-GF 
fix : iformat/oformat are in CGAL::IO
 2023-10-16 11:13:21 +02:00
ange-clement 2732dad5e4 Fix CI 2023-10-16 10:17:37 +02:00
ange-clement 3937c5df34 Implemented make_mesh_3 param : 
initial_points_generator
 2023-10-13 14:51:43 +02:00
ange-clement 00514ec7dc Merge branch 'master' of https://github.com/CGAL/cgal into Mesh-3-edge-distance-criterium-aclement 2023-10-10 15:06:02 +02:00
albert-github 6f560fcdce issue #7767 Problem with the documenation of Mesh_3 
removing files that were removed by #7445 but reintroduced by #7395
 2023-10-09 16:03:49 +02:00
Jane Tournois 2c0e04c4fd replace min_facet_size by squared version to avoid multiple redundant computations 2023-10-06 09:44:53 +02:00
Jane Tournois 7dc1f889e0 wip adding a test 2023-10-06 09:44:04 +02:00
Jane Tournois d46efd537f avoid computing twice the biggest incident facet 2023-10-02 16:59:42 +02:00
Jane Tournois 05b80838e7 check min_size before inserting facets or edges in refinement queues 2023-10-02 16:31:29 +02:00
Jane Tournois e8651b8a58 add min_radius_bound member and accessor 2023-10-02 16:30:21 +02:00
Jane Tournois 1d79ab5023 rename B_ 2023-10-02 16:28:04 +02:00
Jane Tournois eacc3ab4d1 add missing typedef 2023-10-02 12:13:54 +02:00
ange-clement 891da07cf4 Added CGAL:: to global calls 2023-10-02 09:49:55 +02:00
ange-clement 8cca7b57e3 Updated doc : Concept MeshCriteria_3, and CamelCase for template in CGAL::Mesh_edge_criteria_3 2023-09-28 10:14:30 +02:00
Laurent Rineau ebdfddbf5b add a link to TBB 2023-09-25 16:30:47 +02:00
Laurent Rineau 1d29a75c9a iformat/oformat are in CGAL::IO 
The calls without the `IO::` namespace are deprecated.
 2023-09-25 16:09:41 +02:00
Sébastien Loriot 8700394122 boost::mpl::if_ -> std::conditional 2023-09-24 22:57:20 +02:00
Laurent Rineau 28632f21fc Merge branch 'master' into CGAL-Qt6-GF 
# Conflicts:
#	Installation/CHANGES.md
 2023-09-14 17:40:05 +02:00
Laurent Rineau b05e1e9e46 Remove UseCGAL.cmake 
and our old CMake macros `use_lib` and `use_component`.
 2023-09-14 17:32:55 +02:00
Laurent Rineau 3cf928a4c7 Merge pull request #7704 from sloriot/Mesh_3-PCMD_in_domain_bug 
Fix Is_in_domain potential infinite loop

# Conflicts:
#	Mesh_3/include/CGAL/Polyhedral_complex_mesh_domain_3.h
 2023-09-13 16:16:23 +02:00
Sebastien Loriot b2c6cec8af
A missing ref 
Co-authored-by: Andreas Fabri <andreas.fabri@geometryfactory.com>
 2023-09-12 11:08:21 +02:00
ange-clement 96b3fbefad Updated CHANGES.md and small fixes 2023-09-08 11:43:34 +02:00
ange-clement 83b1cb6e1a Merge branch 'Mesh-3-edge-distance-criterium-aclement' of https://github.com/ange-clement/cgal into Mesh-3-edge-distance-criterium-aclement 2023-09-07 18:03:42 +02:00
ange-clement 98a1d0ce71 Fixed edge_distance test 2023-09-07 18:03:29 +02:00