// Copyright (c) 2005 INRIA (France). // All rights reserved. // // This file is part of CGAL (www.cgal.org); you may redistribute it under // the terms of the Q Public License version 1.0. // See the file LICENSE.QPL distributed with CGAL. // // Licensees holding a valid commercial license may use this file in // accordance with the commercial license agreement provided with the software. // // This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE // WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. // // $URL$ // $Id$ // // // Author(s) : Laurent Saboret, Pierre Alliez, Bruno Levy #ifndef CGAL_TAUCS_MATRIX #define CGAL_TAUCS_MATRIX #include #ifdef CGAL_USE_TAUCS #include CGAL_BEGIN_NAMESPACE // Forward declaration template struct Taucs_number; /// The class Taucs_matrix /// is a C++ wrapper around TAUCS' matrix type taucs_ccs_matrix. /// /// This kind of matrix can be either symmetric or not. Symmetric /// matrices store only the lower triangle. /// /// @heading Is Model for the Concepts: Model of the SparseLinearAlgebraTraits_d::Matrix concept. /// template // Tested with T = taucs_single or taucs_double // May also work with T = taucs_dcomplex and taucs_scomplex struct Taucs_matrix { // Public types public: typedef T NT; //__________________________________________________ // Private types private: /** * A column of a Taucs_matrix. The column is * compressed, and stored in the form of * a vector of values + a vector of indices. */ class Column { public: // Vector of values + vector of indices (linked) std::vector m_values; std::vector m_indices; public: // Return the number of elements in the column int dimension() const { return m_values.size(); } // column{index} <- column{index} + val void add_coef(int index, T val) { // Search for element in vectors std::vector::iterator index_it; typename std::vector::iterator value_it; for (index_it = m_indices.begin(), value_it = m_values.begin(); index_it != m_indices.end(); index_it++, value_it++) { if(*index_it == index) { *value_it += val; // += return; } } // Element doesn't exist yet if we reach this point m_indices.push_back(index); m_values.push_back(val); } // column{index} <- val void set_coef(int index, T val) { // Search for element in vectors std::vector::iterator index_it; typename std::vector::iterator value_it; for (index_it = m_indices.begin(), value_it = m_values.begin(); index_it != m_indices.end(); index_it++, value_it++) { if(*index_it == index) { *value_it = val; // = return; } } // Element doesn't exist yet if we reach this point m_indices.push_back(index); m_values.push_back(val); } // return column{index} (0 by default) T get_coef(int index) const { // Search for element in vectors std::vector::const_iterator index_it; typename std::vector::const_iterator value_it; for (index_it = m_indices.begin(), value_it = m_values.begin(); index_it != m_indices.end(); index_it++, value_it++) { if(*index_it == index) return *value_it; // return value } // Element doesn't exist yet if we reach this point return 0; } }; // class Column //__________________________________________________ // Public operations public: /// Create a square matrix initialized with zeros. Taucs_matrix(int dim, ///< Matrix dimension. bool is_symmetric = false) ///< Symmetric/hermitian? { CGAL_precondition(dim > 0); m_row_dimension = dim; m_column_dimension = dim; m_columns = new Column[m_column_dimension]; m_is_symmetric = is_symmetric; m_matrix = NULL; } /// Create a rectangular matrix initialized with zeros. Taucs_matrix(int rows, ///< Matrix dimensions. int columns, bool is_symmetric = false) ///< Symmetric/hermitian? { CGAL_precondition(rows > 0); CGAL_precondition(columns > 0); if (m_is_symmetric) { CGAL_precondition(rows == columns); } m_row_dimension = rows; m_column_dimension = columns; m_columns = new Column[m_column_dimension]; m_is_symmetric = is_symmetric; m_matrix = NULL; } /// Delete this object and the wrapped TAUCS matrix. ~Taucs_matrix() { // Delete the columns array delete[] m_columns; m_columns = NULL; // Delete the the wrapped TAUCS matrix if (m_matrix != NULL) { taucs_ccs_free(m_matrix); m_matrix = NULL; } } /// Return the matrix number of rows int row_dimension() const { return m_row_dimension; } /// Return the matrix number of columns int column_dimension() const { return m_column_dimension; } /// Read access to a matrix coefficient. /// /// Preconditions: /// - 0 <= i < row_dimension(). /// - 0 <= j < column_dimension(). T get_coef(int i, int j) const { // For symmetric matrices, we store only the lower triangle // => swap i and j if (i, j) belongs to the upper triangle if (m_is_symmetric && (j > i)) std::swap(i, j); CGAL_precondition(i < m_row_dimension); CGAL_precondition(j < m_column_dimension); return m_columns[j].get_coef(i); } /// Write access to a matrix coefficient: a_ij <- val. /// /// Optimization: /// For symmetric matrices, Taucs_matrix stores only the lower triangle /// set_coef() does nothing if (i, j) belongs to the upper triangle. /// /// Preconditions: /// - 0 <= i < row_dimension(). /// - 0 <= j < column_dimension(). void set_coef(int i, int j, T val) { if (m_is_symmetric && (j > i)) return; CGAL_precondition(i < m_row_dimension); CGAL_precondition(j < m_column_dimension); m_columns[j].set_coef(i, val); } /// Write access to a matrix coefficient: a_ij <- a_ij + val. /// /// Optimization: /// For symmetric matrices, Taucs_matrix stores only the lower triangle /// add_coef() does nothing if (i, j) belongs to the upper triangle. /// /// Preconditions: /// - 0 <= i < row_dimension(). /// - 0 <= j < column_dimension(). void add_coef(int i, int j, T val) { if (m_is_symmetric && (j > i)) return; CGAL_precondition(i < m_row_dimension); CGAL_precondition(j < m_column_dimension); m_columns[j].add_coef(i, val); } /// Construct and return the TAUCS matrix wrapped by this object. /// Note: the TAUCS matrix returned by this method is valid /// only until the next call to set_coef(), add_coef() or get_taucs_matrix(). const taucs_ccs_matrix* get_taucs_matrix() const { if (m_matrix != NULL) { taucs_ccs_free(m_matrix); m_matrix = NULL; } // Convert matrix's T type to the corresponding TAUCS constant int flags = Taucs_number::TAUCS_FLAG; // We store only the lower triangle of symmetric matrices if (m_is_symmetric) flags |= TAUCS_TRIANGULAR | TAUCS_SYMMETRIC | TAUCS_LOWER; // Compute the number of non null elements in the matrix int nb_max_elements = 0; for (int col=0; col < m_column_dimension; col++) nb_max_elements += m_columns[col].dimension(); // Create the TAUCS matrix wrapped by this object m_matrix = taucs_ccs_create(m_row_dimension, m_column_dimension, nb_max_elements, flags); // Fill m_matrix's colptr[], rowind[] and values[] arrays // Implementation note: // - rowind[] = array of non null elements of the matrix, ordered by columns // - values[] = array of row index of each element of rowind[] // - colptr[j] is the index of the first element of the column j (or where it // should be if it doesn't exist) + the past-the-end index of the last column m_matrix->colptr[0] = 0; for (int col=0; col < m_column_dimension; col++) { // Number of non null elements of the column int nb_elements = m_columns[col].dimension(); // Fast copy of column indices and values memcpy(&m_matrix->rowind[m_matrix->colptr[col]], &m_columns[col].m_indices[0], nb_elements*sizeof(int)); T* taucs_values = (T*) m_matrix->values.v; memcpy(&taucs_values[m_matrix->colptr[col]], &m_columns[col].m_values[0], nb_elements*sizeof(T)); // Start of next column will be: m_matrix->colptr[col+1] = m_matrix->colptr[col] + nb_elements; } return m_matrix; } private: /// Taucs_matrix cannot be copied (yet) Taucs_matrix(const Taucs_matrix& rhs); Taucs_matrix& operator=(const Taucs_matrix& rhs); // Fields private: // Matrix dimensions int m_row_dimension, m_column_dimension; // Columns array Column* m_columns; // Symmetric/hermitian? bool m_is_symmetric; /// The actual TAUCS matrix wrapped by this object. // This is in fact a COPY of the columns array mutable taucs_ccs_matrix* m_matrix; }; // Taucs_matrix /// The class Taucs_symmetric_matrix is a C++ wrapper /// around a TAUCS *symmetric* matrix (type taucs_ccs_matrix). /// /// Symmetric matrices store only the lower triangle. /// /// @heading Is Model for the Concepts: Model of the SparseLinearAlgebraTraits_d::Matrix concept. template // Tested with T = taucs_single or taucs_double // May also work with T = taucs_dcomplex and taucs_scomplex struct Taucs_symmetric_matrix : public Taucs_matrix { // Public types public: typedef T NT; // Public operations public: /// Create a square SYMMETRIC matrix initialized with zeros. /// The max number of non 0 elements in the matrix is automatically computed. Taucs_symmetric_matrix(int dim) ///< Matrix dimension. : Taucs_matrix(dim, true) { } /// Create a square SYMMETRIC matrix initialized with zeros. Taucs_symmetric_matrix(int rows, ///< Matrix dimensions. int columns, int nb_max_elements = 0) ///< Max number of non 0 elements in the ///< matrix (automatically computed if 0). : Taucs_matrix(rows, columns, true, nb_max_elements) { } }; // Utility class to Taucs_matrix // Convert matrix's T type to the corresponding TAUCS constant (called TAUCS_FLAG) template struct Taucs_number {}; template<> struct Taucs_number { enum { TAUCS_FLAG = TAUCS_DOUBLE }; }; template<> struct Taucs_number { enum { TAUCS_FLAG = TAUCS_SINGLE }; }; template<> struct Taucs_number { enum { TAUCS_FLAG = TAUCS_DCOMPLEX }; }; template<> struct Taucs_number { enum { TAUCS_FLAG = TAUCS_SCOMPLEX }; }; CGAL_END_NAMESPACE #endif // CGAL_USE_TAUCS #endif // CGAL_TAUCS_MATRIX