// Copyright (c) 2005-2008 INRIA Sophia-Antipolis (France). // 2008 GeometryFactory, Sophia Antipolis (France) // All rights reserved. // // This file is part of CGAL (www.cgal.org); you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public License as // published by the Free Software Foundation; either version 3 of the License, // or (at your option) any later version. // // Licensees holding a valid commercial license may use this file in // accordance with the commercial license agreement provided with the software. // // This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE // WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. // // $URL$ // $Id$ // // Author(s) : Laurent Rineau, Pierre Alliez #ifdef CGAL_HEADER_ONLY #define CGAL_INLINE_FUNCTION inline #else #define CGAL_INLINE_FUNCTION #endif #include #include namespace CGAL { CGAL_INLINE_FUNCTION bool Image_3::private_read(_image* im) { if(im != 0) { if(image() != 0) { ::_freeImage(image()); } image_ptr = Image_shared_ptr(im, Image_deleter()); // std::cerr << // boost::format("image=%1% (xdim=%2%, ydim=%3%, zdim=%4%)\n") // % image_ptr.get() % image_ptr->xdim % image_ptr->ydim % image_ptr->zdim; } return im != 0; } CGAL_INLINE_FUNCTION void Image_3::gl_draw(const float point_size, const unsigned char r, const unsigned char g, const unsigned char b) { if(image_ptr.get() == NULL) return; glPointSize(point_size); glColor3ub(r,g,b); glBegin(GL_POINTS); unsigned char *pData = (unsigned char*)image_ptr->data; unsigned int xy = image_ptr->xdim * image_ptr->ydim; for(unsigned int i=0;ixdim;i+=5) for(unsigned int j=0;jydim;j+=5) for(unsigned int k=0;kzdim;k+=5) { unsigned char value = pData[xy*k + j*image_ptr->xdim + i]; if(value > 0) { double x = image_ptr->vx * i; double y = image_ptr->vy * j; double z = image_ptr->vz * k; glVertex3d(x,y,z); } } glEnd(); } // end Image_3::gl_draw CGAL_INLINE_FUNCTION void Image_3::gl_draw_bbox(const float line_width, const unsigned char red, const unsigned char green, const unsigned char blue) { if(!image_ptr) return; glLineWidth(line_width); glColor3ub(red,green,blue); glBegin(GL_LINES); struct Point { double x_; double y_; double z_; Point(double x, double y, double z) : x_(x), y_(y), z_(z) {}; double x() const { return x_; } double y() const { return y_; } double z() const { return z_; } }; const double xmax = (image_ptr->xdim - 1.0)*(image_ptr->vx); const double ymax = (image_ptr->ydim - 1.0)*(image_ptr->vy); const double zmax = (image_ptr->zdim - 1.0)*(image_ptr->vz); Point a(0.0, 0.0, 0.0); Point b(0.0, ymax, 0.0); Point c(0.0, ymax, zmax); Point d(0.0, 0.0, zmax); Point e(xmax, 0.0, 0.0); Point f(xmax, ymax, 0.0); Point g(xmax, ymax, zmax); Point h(xmax, 0.0, zmax); glVertex3d(a.x(),a.y(),a.z()); glVertex3d(b.x(),b.y(),b.z()); glVertex3d(b.x(),b.y(),b.z()); glVertex3d(c.x(),c.y(),c.z()); glVertex3d(c.x(),c.y(),c.z()); glVertex3d(d.x(),d.y(),d.z()); glVertex3d(d.x(),d.y(),d.z()); glVertex3d(a.x(),a.y(),a.z()); glVertex3d(e.x(),e.y(),e.z()); glVertex3d(f.x(),f.y(),f.z()); glVertex3d(f.x(),f.y(),f.z()); glVertex3d(g.x(),g.y(),g.z()); glVertex3d(g.x(),g.y(),g.z()); glVertex3d(h.x(),h.y(),h.z()); glVertex3d(h.x(),h.y(),h.z()); glVertex3d(e.x(),e.y(),e.z()); glVertex3d(a.x(),a.y(),a.z()); glVertex3d(e.x(),e.y(),e.z()); glVertex3d(d.x(),d.y(),d.z()); glVertex3d(h.x(),h.y(),h.z()); glVertex3d(c.x(),c.y(),c.z()); glVertex3d(g.x(),g.y(),g.z()); glVertex3d(b.x(),b.y(),b.z()); glVertex3d(f.x(),f.y(),f.z()); glEnd(); } // end Image_3::gl_draw_bbox } // end namespace CGAL #ifdef CGAL_USE_VTK #include #include namespace CGAL { namespace { struct VTK_to_ImageIO_type_mapper { WORD_KIND wordKind; SIGN sign; unsigned int wdim; }; static const VTK_to_ImageIO_type_mapper VTK_to_ImageIO_type[VTK_ID_TYPE] = { { WK_UNKNOWN, SGN_UNKNOWN, 0}, // 0=VTK_VOID { WK_UNKNOWN, SGN_UNKNOWN, 0}, // 1=VTK_BIT { WK_FIXED, SGN_SIGNED, 1}, // 2=VTK_CHAR { WK_FIXED, SGN_UNSIGNED, 1}, // 3=VTK_UNSIGNED_CHAR { WK_FIXED, SGN_SIGNED, 2}, // 4=VTK_SHORT { WK_FIXED, SGN_UNSIGNED, 2}, // 5=VTK_UNSIGNED_SHORT { WK_FIXED, SGN_SIGNED, 4}, // 6=VTK_INT { WK_FIXED, SGN_UNSIGNED, 4}, // 7=VTK_UNSIGNED_INT { WK_FIXED, SGN_SIGNED, 8}, // 8=VTK_LONG { WK_FIXED, SGN_UNSIGNED, 8}, // 9=VTK_UNSIGNED_LONG { WK_FLOAT, SGN_SIGNED, 4}, // 10=VTK_FLOAT { WK_FIXED, SGN_SIGNED, 8} // 11=VTK_DOUBLE }; } //end anonymous namespace CGAL_INLINE_FUNCTION bool Image_3::read_vtk_image_data(vtkImageData* vtk_image) { if(!vtk_image) return false; _image* image = ::_initImage(); const int* dims = vtk_image->GetDimensions(); const double* spacing = vtk_image->GetSpacing(); image->vectMode = VM_SCALAR; image->xdim = dims[0]; image->ydim = dims[1]; image->zdim = dims[2]; image->vdim = 1; image->vx = spacing[0]; image->vy = spacing[1]; image->vz = spacing[2]; vtk_image->Update(); image->endianness = ::_getEndianness(); int vtk_type = vtk_image->GetScalarType(); if(vtk_type == VTK_SIGNED_CHAR) vtk_type = VTK_CHAR; if(vtk_type < 0 || vtk_type > VTK_DOUBLE) vtk_type = VTK_DOUBLE; const VTK_to_ImageIO_type_mapper& imageio_type = VTK_to_ImageIO_type[vtk_type]; image->wdim = imageio_type.wdim; image->wordKind = imageio_type.wordKind; image->sign = imageio_type.sign; image->data = ::ImageIO_alloc(dims[0]*dims[1]*dims[2]*image->wdim); std::cerr << "GetNumberOfTuples()=" << vtk_image->GetPointData()->GetScalars()->GetNumberOfTuples() << "\nimage->size()=" << dims[0]*dims[1]*dims[2] << "\nwdim=" << image->wdim << '\n'; CGAL_assertion(vtk_image->GetPointData()->GetScalars()->GetNumberOfTuples() == dims[0]*dims[1]*dims[2]); vtk_image->GetPointData()->GetScalars()->ExportToVoidPointer(image->data); return this->private_read(image); } } // end namespace CGAL #endif // CGAL_USE_VTK