cgal/Tetrahedral_remeshing/include/CGAL/tetrahedral_remeshing.h

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// Copyright (c) 2020 GeometryFactory (France) and Telecom Paris (France).
// All rights reserved.
//
// This file is part of CGAL (www.cgal.org)
//
// $URL$
// $Id$
// SPDX-License-Identifier: GPL-3.0-or-later OR LicenseRef-Commercial
//
//
// Author(s) : Jane Tournois, Noura Faraj, Jean-Marc Thiery, Tamy Boubekeur
#ifndef TETRAHEDRAL_REMESHING_H
#define TETRAHEDRAL_REMESHING_H
#include <CGAL/license/Tetrahedral_remeshing.h>
#include <CGAL/Triangulation_3.h>
#include <CGAL/Mesh_complex_3_in_triangulation_3.h>
#include <CGAL/Uniform_sizing_field.h>
#include <CGAL/Tetrahedral_remeshing/internal/property_maps.h>
#include <CGAL/Tetrahedral_remeshing/internal/tetrahedral_adaptive_remeshing_impl.h>
#include <CGAL/Tetrahedral_remeshing/internal/compute_c3t3_statistics.h>
#include <CGAL/Named_function_parameters.h>
#include <CGAL/boost/graph/named_params_helper.h>
#include <CGAL/property_map.h>
#include <type_traits>
#ifdef CGAL_DUMP_REMESHING_STEPS
#include <sstream>
#endif
namespace CGAL
{
///////////////////////////////////////////////////
///////////////// TRIANGULATION_3 /////////////////
///////////////////////////////////////////////////
/*!
* \ingroup PkgTetrahedralRemeshingRef
* remeshes a tetrahedral mesh.
*
* It is recommended to use `CGAL::Tetrahedral_remeshing::Remeshing_triangulation_3`
* for the first parameter, as it inherits from `Triangulation_3` with a `TDS` suitable for this function.
*
* This function takes as input a 3-dimensional triangulation
* and performs a sequence of atomic operations
* in order to generate as output a high quality mesh with a prescribed
* uniform density.
* These atomic operations are performed as follows:
* - edge splits, until all edges satisfy a prescribed length criterion,
* - edge collapses, until all edges satisfy a prescribed length criterion,
* - edge flips, to locally improve dihedral angles, until they can
* no longer be improved by flipping,
* - global smoothing by vertex relocations,
* - re-projection of boundary vertices to the initial surface.
*
* This remeshing function can deal with multi-domains, boundaries, and features.
* It preserves the geometry of
* subdomains throughout the remeshing process.
*
* Subdomains are defined by indices that
* are stored in the cells of the input triangulation, following the `SimplicialMeshCellBase_3`
* concept (refined by `RemeshingCellBase_3`).
* The surfacic interfaces between subdomains are formed by facets whose two incident cells
* have different subdomain indices.
* The edges where three or more subdomains meet form feature polylines,
* and are considered as constrained edges.
*
*
* @tparam Traits is the geometric traits, model of `RemeshingTriangulationTraits_3`
* @tparam TDS is the triangulation data structure for `Triangulation_3`,
* model of ` TriangulationDataStructure_3`,
* with cell base model of `RemeshingCellBase_3`
* and vertex base model of `RemeshingVertexBase_3`.
* @tparam SLDS is an optional parameter for `Triangulation_3`, that
* specifies the type of the spatial lock data structure.
* @tparam SizingFunction a sizing field functional,
* model of `RemeshingSizingField_3`, or type convertible to `double`.
* @tparam NamedParameters a sequence of \ref bgl_namedparameters "Named Parameters"
*
* @param tr the triangulation to be remeshed, of type `Triangulation_3<Traits, TDS, SLDS>`.
* `Remeshing_triangulation` is a helper class that satisfies all the requirements
* of its template parameters.
* @param sizing the target edge length. This parameter provides a
* mesh density target for the remeshing algorithm.
* It can be a number convertible to `double`,
* or an instance of a model of `RemeshingSizingField_3`.
* @param np optional sequence of \ref bgl_namedparameters "Named Parameters"
* among the ones listed below
*
* \cgalNamedParamsBegin
* \cgalParamNBegin{number_of_iterations}
* \cgalParamDescription{the number of iterations for the full sequence of atomic operations
* performed (listed in the above description)}
* \cgalParamType{unsigned int}
* \cgalParamDefault{`1`}
* \cgalParamNEnd
*
* \cgalParamNBegin{remesh_boundaries}
* \cgalParamDescription{If `false`, none of the input volume boundaries can be modified.
* Otherwise, the topology is preserved, but atomic operations
* can be performed on the surfaces, and along feature polylines,
* such that boundaries are remeshed.}
* \cgalParamType{`bool`}
* \cgalParamDefault{`true`}
* \cgalParamExtra{Boundaries are between the exterior and the interior,
* between two subdomains, between the areas selected or not for remeshing
* (cf `Remeshing_cell_is_selected_map`), or defined
* by `Remeshing_edge_is_constrained_map` and `Remeshing_facet_is_constrained_map`.}
* \cgalParamNEnd
*
* \cgalParamNBegin{facet_is_constrained_map}
* \cgalParamDescription{a property map containing the constrained-or-not status of each facet of `tr`.}
* \cgalParamType{a class model of `ReadablePropertyMap` with `Triangulation_3::Facet`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where no facet is constrained}
* \cgalParamExtra{A constrained facet can be split or collapsed, but not flipped.}
* \cgalParamExtra{This map, contrary to the others, is not updated throughout the remeshing process.}
* \cgalParamNEnd
*
* \cgalParamNBegin{edge_is_constrained_map}
* \cgalParamDescription{a property map containing the constrained-or-not status of each edge of `tr`.}
* \cgalParamType{a class model of `ReadWritePropertyMap` with `std::pair<Triangulation_3::Vertex_handle, Triangulation_3::Vertex_handle>`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where no edge is constrained}
* \cgalParamExtra{A constrained edge can be split or collapsed, but not flipped.}
* \cgalParamExtra{The pairs must be ordered to ensure consistency.}
* \cgalParamExtra{During the meshing process, the set of constrained edges evolves consistently
* with edge splits and collapses, so the property map must be writable.}
* \cgalParamNEnd
*
* \cgalParamNBegin{vertex_is_constrained_map}
* \cgalParamDescription{a property map containing the constrained-or-not status of each vertex of `tr`.}
* \cgalParamType{a class model of `ReadWritePropertyMap` with `Triangulation_3::Vertex_handle`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where no vertex is constrained}
* \cgalParamExtra{A constrained vertex cannot be removed by collapse, nor moved by smoothing.}
* \cgalParamNEnd
*
* \cgalParamNBegin{cell_is_selected_map}
* \cgalParamDescription{a property map containing the selected - or - not status for each cell of `tr` for remeshing.
* Only selected cells are modified (and possibly their neighbors if surfaces are modified) by remeshing.}
* \cgalParamType{a class model of `ReadWritePropertyMap` with `Triangulation_3::Cell_handle`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where all cells of the domain
* (i.e. with a non-zero `Subdomain_index`) are selected.}
* \cgalParamExtra{During the meshing process, the set of selected cells evolves consistently with
* the atomic operations that are performed, so the property map must be writable.}
* \cgalParamNEnd
*
* \cgalParamNBegin{smooth_constrained_edges}
* \cgalParamDescription{If `true`, the end vertices of the edges set as
* constrained in `edge_is_constrained_map` move along the
* constrained polylines they belong to.}
* \cgalParamType{`bool`}
* \cgalParamDefault{`false`}
* \cgalParamExtra{The endvertices of constraints listed
* by `edge_is_constrained_map`, and edges incident to at least three subdomains
* are made eligible to one dimensional smoothing, along the constrained polylines they belong to.
* Corners (i.e. vertices listed by `vertex_is_constrained_map` or
* incident to more than 2 constrained edges) are not allowed
* to move at all.\n
* Note that activating the smoothing step on polyline constraints tends to reduce
* the quality of the minimal dihedral angle in the mesh.\n
* If `remesh_boundaries` is set to `false`, this parameter is ignored.}
* \cgalParamNEnd
*
* \cgalNamedParamsEnd
*
* \sa `CGAL::Tetrahedral_remeshing::Remeshing_triangulation_3`
*/
template<typename Traits, typename TDS, typename SLDS,
typename SizingFunction,
typename NamedParameters = parameters::Default_named_parameters
#ifndef DOXYGEN_RUNNING
, typename = std::enable_if_t<
std::is_invocable_v<SizingFunction,
typename Traits::Point_3, int, typename TDS::Vertex::Index> >
#endif
>
void tetrahedral_isotropic_remeshing(
CGAL::Triangulation_3<Traits, TDS, SLDS>& tr,
const SizingFunction& sizing,
const NamedParameters& np = parameters::default_values())
{
CGAL_expensive_assertion(tr.is_valid());
using Tr = CGAL::Triangulation_3<Traits, TDS, SLDS>;
using Remesher_types
= typename Tetrahedral_remeshing::internal::Adaptive_remesher_type_generator
<Tr, SizingFunction, NamedParameters>;
using parameters::choose_parameter;
using parameters::get_parameter;
bool remesh_surfaces = choose_parameter(get_parameter(np, internal_np::remesh_boundaries),
true);
bool protect = !remesh_surfaces;
std::size_t max_it = choose_parameter(get_parameter(np, internal_np::number_of_iterations),
1);
bool smooth_constrained_edges
= choose_parameter(get_parameter(np, internal_np::smooth_constrained_edges),
false);
auto cell_select
= choose_parameter(get_parameter(np, internal_np::cell_selector),
typename Remesher_types::Default_Selection_functor());
auto vcmap = choose_parameter(get_parameter(np, internal_np::vertex_is_constrained),
typename Remesher_types::Default_VCMap(false));
auto ecmap = choose_parameter(get_parameter(np, internal_np::edge_is_constrained),
typename Remesher_types::Default_ECMap(false));
auto fcmap = choose_parameter(get_parameter(np, internal_np::facet_is_constrained),
typename Remesher_types::Default_FCMap(false));
// Advanced and non documented parameters
auto visitor = choose_parameter(get_parameter(np, internal_np::visitor),
typename Remesher_types::Default_Visitor());
auto nb_extra_iterations
= choose_parameter(get_parameter(np, internal_np::nb_flip_smooth_iterations),
std::size_t(3));
#ifdef CGAL_TETRAHEDRAL_REMESHING_VERBOSE
std::cout << "Tetrahedral remeshing ("
<< "nb_iter = " << max_it << ", "
<< "protect = " << std::boolalpha << protect
<< ")" << std::endl;
std::cout << "Init tetrahedral remeshing...";
std::cout.flush();
#endif
using Remesher = typename Remesher_types::type;
Remesher remesher(tr, sizing, protect
, vcmap, ecmap, fcmap
, smooth_constrained_edges
, cell_select
, visitor);
#ifdef CGAL_TETRAHEDRAL_REMESHING_VERBOSE
std::cout << "done." << std::endl;
#endif
#ifdef CGAL_TETRAHEDRAL_REMESHING_DEBUG
Tetrahedral_remeshing::internal::compute_statistics(
remesher.tr(), cell_select, "statistics_begin.txt");
#endif
// perform remeshing
#ifdef CGAL_TETRAHEDRAL_REMESHING_NO_EXTRA_ITERATIONS
nb_extra_iterations = 0;
#endif
remesher.remesh(max_it, nb_extra_iterations);
#ifdef CGAL_TETRAHEDRAL_REMESHING_DEBUG
const double angle_bound = 5.0;
Tetrahedral_remeshing::debug::dump_cells_with_small_dihedral_angle(tr,
angle_bound, cell_select, "bad_cells.mesh");
Tetrahedral_remeshing::internal::compute_statistics(tr,
cell_select, "statistics_end.txt");
#endif
}
template<typename Traits, typename TDS, typename SLDS, typename FT,
typename NamedParameters = parameters::Default_named_parameters
#ifndef DOXYGEN_RUNNING
, typename = std::enable_if_t<
!std::is_invocable_v<FT,
typename Traits::Point_3, int, typename TDS::Vertex::Index> >
#endif
>
void tetrahedral_isotropic_remeshing(
CGAL::Triangulation_3<Traits, TDS, SLDS>& tr,
const FT target_edge_length,
const NamedParameters& np = parameters::default_values())
{
using P = typename Traits::Point_3;
using Index = typename TDS::Vertex::Index;
using Sizing_FT = typename Traits::FT;
const Sizing_FT target_ft = static_cast<Sizing_FT>(target_edge_length);
tetrahedral_isotropic_remeshing(
tr,
[target_ft]
(const P&, const int&, const Index&)
{ return target_ft; },
np);
}
/*!
* \ingroup PkgTetrahedralRemeshingRef
* converts the triangulation contained in the input to a `Triangulation_3`.
*
* This function should be used to generate a valid triangulation
* for tetrahedral remeshing, when the input triangulation is generated with the
* tetrahedral mesh generation package.
*
* @tparam Tr is the underlying triangulation for `Mesh_complex_3_in_triangulation_3`.
* It can be instantiated with any 3D regular triangulation of CGAL provided
* that its vertex and cell base classes are models of the concepts
* `SimplicialMeshCellBase_3` (refined by `RemeshingCellBase_3`)
* and `SimplicialMeshVertexBase_3` (refined by `RemeshingVertexBase_3`), respectively.
* @tparam CornerIndex is the type of the indices for feature corners.
* If `c3t3` has been generated using `CGAL::make_mesh_3()`, it must match
* `MeshDomainWithFeatures_3::Corner_index`.
* @tparam CurveIndex is the type of the indices for feature curves.
* If `c3t3` has been generated using `CGAL::make_mesh_3()`, it must match
* `MeshDomainWithFeatures_3::Curve_index`.
* @tparam NamedParameters a sequence of \ref bgl_namedparameters "Named Parameters"
*
* @param c3t3 the complex containing the triangulation to be remeshed.
* @param np optional sequence of \ref bgl_namedparameters "Named Parameters"
* among the ones listed below
*
* \cgalNamedParamsBegin
* \cgalParamNBegin{edge_is_constrained_map}
* \cgalParamDescription{a property map containing the constrained-or-not status of each edge of
* `c3t3.triangulation()`.
* For each edge `e` for which `c3t3.is_in_complex(e)` returns `true`,
* the constrained status of `e` is set to `true`.}
* \cgalParamType{a class model of `ReadWritePropertyMap`
* with `std::pair<Triangulation_3::Vertex_handle, Triangulation_3::Vertex_handle>`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where no edge is constrained}
* \cgalParamNEnd
* \cgalParamNBegin{vertex_is_constrained_map}
* \cgalParamDescription{a property map containing the constrained-or-not status of each vertex of
* `c3t3.triangulation()`.
* For each vertex `v` for which `c3t3.is_in_complex(v)` returns `true`,
* the constrained status of `v` is set to `true`.}
* \cgalParamType{a class model of `ReadWritePropertyMap`
* with `Triangulation_3::Vertex_handle`
* as key type and `bool` as value type. It must be default constructible.}
* \cgalParamDefault{a default property map where no vertex is constrained}
* \cgalParamNEnd
* \cgalNamedParamsEnd
*/
template<typename Tr,
typename CornerIndex,
typename CurveIndex,
typename NamedParameters = parameters::Default_named_parameters>
CGAL::Triangulation_3<typename Tr::Geom_traits,
typename Tr::Triangulation_data_structure>
convert_to_triangulation_3(
CGAL::Mesh_complex_3_in_triangulation_3<Tr, CornerIndex, CurveIndex> c3t3,
const NamedParameters& np = parameters::default_values())
{
using parameters::get_parameter;
using parameters::choose_parameter;
using GT = typename Tr::Geom_traits;
using TDS = typename Tr::Triangulation_data_structure;
using Dummy_sizing = CGAL::Uniform_sizing_field<GT>;
using Remesher_types
= typename Tetrahedral_remeshing::internal::Adaptive_remesher_type_generator
<Tr, Dummy_sizing, NamedParameters, CornerIndex, CurveIndex>;
using Default_edge_pmap = typename Remesher_types::Default_ECMap;
using ECMap = typename Remesher_types::ECMap;
if (!std::is_same_v<ECMap, Default_edge_pmap>)
{
ECMap ecmap = choose_parameter(get_parameter(np, internal_np::edge_is_constrained),
Default_edge_pmap(false));
for (auto e : c3t3.edges_in_complex())
{
const auto evv = CGAL::Tetrahedral_remeshing::make_vertex_pair(e);//ordered pair
put(ecmap, evv, true);
}
}
using Default_vertex_pmap = typename Remesher_types::Default_VCMap;
using VCMap = typename Remesher_types::VCMap;
if (!std::is_same_v<VCMap, Default_vertex_pmap>)
{
VCMap vcmap = choose_parameter(get_parameter(np, internal_np::vertex_is_constrained),
Default_vertex_pmap(false));
for (auto v : c3t3.vertices_in_complex())
{
put(vcmap, v, true);
}
}
CGAL::Triangulation_3<GT, TDS> tr;
tr.swap(c3t3.triangulation());
return tr;
}
///////////////////////////////////////////////////
/////// MESH_COMPLEX_3_IN_TRIANGULATION_3 /////////
///////////////////////////////////////////////////
///////
////// Warning with using this version :
////// the triangulation after remeshing is not regular anymore
////// the empty-sphere property is not respected
///////
template<typename Tr,
typename CornerIndex, typename CurveIndex, typename FT,
typename NamedParameters = parameters::Default_named_parameters
#ifndef DOXYGEN_RUNNING
, typename = std::enable_if_t<
!std::is_invocable_v<FT,
typename Tr::Geom_traits::Point_3, int, typename Tr::Vertex::Index> >
#endif
>
void tetrahedral_isotropic_remeshing(
CGAL::Mesh_complex_3_in_triangulation_3<Tr, CornerIndex, CurveIndex>& c3t3,
const FT target_edge_length,
const NamedParameters& np = parameters::default_values())
{
using P = typename Tr::Geom_traits::Point_3;
using Index = typename Tr::Vertex::Index;
using Sizing_FT = typename Tr::Geom_traits::FT;
const Sizing_FT target_ft = static_cast<Sizing_FT>(target_edge_length);
tetrahedral_isotropic_remeshing(
c3t3,
[target_ft]
(const P&, const int&, const Index&)
{ return target_ft; },
np);
}
template<typename Tr,
typename CornerIndex, typename CurveIndex,
typename SizingFunction,
typename NamedParameters = parameters::Default_named_parameters
#ifndef DOXYGEN_RUNNING
, typename = std::enable_if_t<
std::is_invocable_v<SizingFunction,
typename Tr::Geom_traits::Point_3, int, typename Tr::Vertex::Index> >
#endif
>
void tetrahedral_isotropic_remeshing(
CGAL::Mesh_complex_3_in_triangulation_3<Tr, CornerIndex, CurveIndex>& c3t3,
const SizingFunction& sizing,
const NamedParameters& np = parameters::default_values())
{
CGAL_expensive_assertion(c3t3.triangulation().tds().is_valid());
using parameters::get_parameter;
using parameters::choose_parameter;
using Remesher_types
= Tetrahedral_remeshing::internal::Adaptive_remesher_type_generator
<Tr, SizingFunction, NamedParameters, CornerIndex, CurveIndex>;
bool remesh_surfaces = choose_parameter(get_parameter(np, internal_np::remesh_boundaries),
true);
bool protect = !remesh_surfaces;
std::size_t max_it = choose_parameter(get_parameter(np, internal_np::number_of_iterations), 1);
bool smooth_constrained_edges
= choose_parameter(get_parameter(np, internal_np::smooth_constrained_edges),
false);
auto cell_select
= choose_parameter(get_parameter(np, internal_np::cell_selector),
typename Remesher_types::Default_Selection_functor());
auto vcmap = choose_parameter(get_parameter(np, internal_np::vertex_is_constrained),
typename Remesher_types::Default_VCMap(false));
auto ecmap = choose_parameter(get_parameter(np, internal_np::edge_is_constrained),
typename Remesher_types::Default_ECMap(false));
auto fcmap = choose_parameter(get_parameter(np, internal_np::facet_is_constrained),
typename Remesher_types::Default_FCMap(false));
// Advanced and non documented parameters
auto visitor
= choose_parameter(get_parameter(np, internal_np::visitor),
typename Remesher_types::Default_Visitor());
auto nb_extra_iterations
= choose_parameter(get_parameter(np, internal_np::nb_flip_smooth_iterations),
std::size_t(3));
#ifdef CGAL_TETRAHEDRAL_REMESHING_VERBOSE
std::cout << "Tetrahedral remeshing ("
<< "nb_iter = " << max_it << ", "
<< "protect = " << std::boolalpha << protect
<< ")" << std::endl;
std::cout << "Init tetrahedral remeshing...";
std::cout.flush();
#endif
using Remesher = typename Remesher_types::type;
Remesher remesher(c3t3, sizing, protect
, vcmap, ecmap, fcmap
, smooth_constrained_edges
, cell_select
, visitor);
#ifdef CGAL_TETRAHEDRAL_REMESHING_VERBOSE
std::cout << "done." << std::endl;
Tetrahedral_remeshing::internal::compute_statistics(
remesher.tr(),
cell_select, "statistics_begin.txt");
#endif
// perform remeshing
#ifdef CGAL_TETRAHEDRAL_REMESHING_NO_EXTRA_ITERATIONS
nb_extra_iterations = 0;
#endif
remesher.remesh(max_it, nb_extra_iterations);
#ifdef CGAL_TETRAHEDRAL_REMESHING_DEBUG
const double angle_bound = 5.0;
Tetrahedral_remeshing::debug::dump_cells_with_small_dihedral_angle(
c3t3.triangulation(),
angle_bound, cell_select, "bad_cells.mesh");
#endif
#ifdef CGAL_TETRAHEDRAL_REMESHING_DEBUG
Tetrahedral_remeshing::internal::compute_statistics(
c3t3.triangulation(),
cell_select, "statistics_end.txt");
#endif
}
}//end namespace CGAL
#endif //TETRAHEDRAL_REMESHING_H