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339 Commits

Author SHA1 Message Date
Mael Rouxel-Labbé cb5d6444f5 Fix missing input filename 2020-10-14 15:32:44 +02:00
Olivier Boes 6aa3d6d583
Update Heat_method_3/include/CGAL/Heat_method_3/internal/Intrinsic_Delaunay_triangulation_3.h 
Co-authored-by: Sebastien Loriot <sloriot.ml@gmail.com>
 2020-10-05 16:54:11 +02:00
oboes 005f237f55 Add mollification step to avoid degenerate faces 
Degenerate faces (which can cause an infinite loop in `loop_over_edges`)
are handled by using the mollification step described in section 4.5 of
N. Sharp & K. Crane "A Laplacian for Nonmanifold Triangle Meshes" (2020).
The tolerance value is set to 1/1000 of the minimum non-zero edge length.
 2020-09-29 16:31:56 +02:00
Jane Tournois 2168bdda9c remove empty \pre 2020-09-29 13:01:21 +02:00
Jane Tournois a23d2baa87 add a precondition to avoid degenerate faces in input 
degenerate faces cause an infinite loop in `loop_over_edges()`
 2020-09-29 12:06:18 +02:00
Maxime Gimeno 9c15f2c9dc Use FeatureSummary in the demo, and remove CGAL_FOUND 2020-08-04 12:46:17 +02:00
Mael Rouxel-Labbé 9cca59ba36 Actually use the new IO functions + some example improvements 2020-06-23 18:24:39 +02:00
Simon Giraudot 89285f1feb Merge remote-tracking branch 'mine/CMake-Third_party_imported_targets-GF' into CMake-Third_party_imported_targets-GF 2020-05-28 08:53:17 +02:00
Sébastien Loriot 3b6c100ca6 Merge remote-tracking branch 'cgal/releases/CGAL-5.0-branch' 2020-04-29 14:12:29 +02:00
Sébastien Loriot 67b53faece Merge remote-tracking branch 'cgal/releases/CGAL-4.14-branch' 2020-04-29 14:06:37 +02:00
Sebastien Loriot c6df90f943
Merge pull request #4680 from MaelRL/HM-Undocument_deleted_functions-GF 
Heat Method: remove wrapper around deleted function
 2020-04-29 14:00:23 +02:00
Mael 487e315481
Remove non-disableable output 2020-04-27 12:07:12 +02:00
Mael Rouxel-Labbé 52bcf27c0a Remove wrapper around removed function estimate_geodesic_distance() 2020-04-24 18:43:31 +02:00
Maxime Gimeno 5b2d46cfa0 Fixes for min/max 2020-04-21 12:04:45 +02:00
Maxime Gimeno 50766d9d03 Fixes for min/max 2020-04-21 11:52:56 +02:00
Maxime Gimeno e9d41d7b7d Fixes for min/max 2020-04-21 11:38:37 +02:00
Simon Giraudot 421096fd7f Use imported targets everywhere 2020-04-15 14:06:13 +02:00
Sébastien Loriot 8bb22d5b2c extra run of the script to remove tabs and trailing whitespaces 
right after the merge of the 5.0 release branch

+ manual fix of the files (indentation was changed in the meantime):
   * Spatial_sorting/include/CGAL/Multiscale_sort.h
   * Spatial_sorting/test/Spatial_sorting/test_multiscale.cpp
 2020-03-26 14:26:59 +01:00
Sébastien Loriot 8b153fb495 Merge branch 'cgal/releases/CGAL-5.0-branch' 
whitespace+tab removal, merged with option -Xignore-space-change
 2020-03-26 14:22:32 +01:00
Sébastien Loriot 0779373835 extra run of the script to remove tabs and trailing whitespaces 
right after the  merge of 4.14 release branch

+ manual fix on one line in:
    * Arrangement_on_surface_2/include/CGAL/IO/Arr_text_formatter.h
    * .travis/generate_travis.sh
 2020-03-26 14:16:06 +01:00
Sébastien Loriot 0a46621dc6 Merge branch 'cgal/releases/CGAL-4.14-branch' 
whitespace+tab removal, merged with option -Xignore-all-space
 2020-03-26 13:28:46 +01:00
Sébastien Loriot 590612a563 run the script to remove tabs and trailing whitespaces 2020-03-26 13:25:16 +01:00
Simon Giraudot 6c8fd43ebb Use CGAL_target_use_* mechanism for Eigen, LASLIB, OpenCV, TensorFlow, GLPK, SCIP, Boost IOStreams and Serialization 2020-02-10 11:57:56 +01:00
Sébastien Loriot 254d60f642 First pass on removing license notice in header for GPL files 2019-10-19 15:23:19 +02:00
Sébastien Loriot 7356421d80 introduce Commercial license SPDX tag 2019-10-19 12:15:19 +02:00
Sébastien Loriot 9bd9c68b83 update LGPL[23]+ and GPL[23]+ SPDX tags 
ack -l --no-svg "SPDX-License-Identifier: GPL-3.0\+" | xargs sed -i "s/SPDX-License-Identifier: GPL-3.0+/SPDX-License-Identifier: GPL-3.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: LGPL-3.0\+" | xargs sed -i "s/SPDX-License-Identifier: LGPL-3.0+/SPDX-License-Identifier: LGPL-3.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: GPL-2.0\+" | xargs sed -i "s/SPDX-License-Identifier: GPL-2.0+/SPDX-License-Identifier: GPL-2.0-or-later/"
ack -l --no-svg "SPDX-License-Identifier: LGPL-2.0\+" | xargs sed -i "s/SPDX-License-Identifier: LGPL-2.0+/SPDX-License-Identifier: LGPL-2.0-or-later/"
 2019-10-18 21:57:54 +02:00
Mael Rouxel-Labbé f68141a6d3 Merge branch 'PMP-Locate-GF-old' into PMP-Locate-GF 2019-07-01 11:28:25 +02:00
Laurent Rineau 4fbf00fb8a CMake>=3.13: opt for for new policies up to 3.15 2019-06-19 14:34:59 +02:00
Mael Rouxel-Labbé 0b506f5cce Fix package dependencies 2019-05-10 12:41:25 +02:00
Sébastien Loriot 6d9b0e4260 make the ranges iterable 2019-03-29 13:23:46 +01:00
Sébastien Loriot d60f5645aa replace BOOST_FOREACH by c++ ranged-based for loop 
some of the command used for the replacement:
ack --cpp  BOOST_FOREACH -l  | xargs sed -i -E "s/BOOST_FOREACH\(([a-zA-Z_:&0-9]+)\s(\w+)\,/for(\1 \2 :/"
ack --cpp  BOOST_FOREACH -l  | xargs sed -i -E "s/BOOST_FOREACH\((const [a-zA-Z_:&0-9]+)\s(\w+)\,/for(\1 \2 :/"
ack --cpp  BOOST_FOREACH -l  | xargs sed -i -E "s/BOOST_FOREACH\((const typename [a-zA-Z_:&0-9]+)\s(\w+)\,/for(\1 \2 :/"
ack --cpp  BOOST_FOREACH -l  | xargs sed -i -E "s/BOOST_FOREACH\((typename [<>a-zA-Z_:&0-9]+)\s(\w+)\,/for(\1 \2 :/"
ack "boost/foreach.hpp" -l --cpp | xargs sed -i '/boost\/foreach.hpp>/d'
 2019-03-29 13:22:15 +01:00
Sébastien Loriot 59bc453b42 first batch of replacement for level 1 in classified ref man 
command used:
grep -l  "##" */doc/*/PackageDescription.txt | xargs  sed -i  -E 's/\#\#\s*([[:print:]]+[[:alnum:]])\s*\#\#\s*$/\\cgalCRPSection{\1}/'
 2019-02-14 10:32:39 +01:00
Andreas Fabri 0d87414b4c No need for copy constructor 2019-01-15 19:23:13 +01:00
Andreas Fabri 96ef7fa629 Changes after Michael's review 2019-01-07 11:45:44 +01:00
Andreas Fabri 6979ad1f74 Changes after Michael's review 2019-01-07 08:42:51 +01:00
Andreas Fabri 5841a8b48c Move internal header file 2018-12-23 18:23:07 +01:00
Andreas Fabri 586b185b64 Changes after Guillaume's review 2018-12-21 11:50:27 +01:00
Laurent Rineau 5c34bb1f36 The equation of "the gradient in a given triangle" was missing 
and the introduction of the equation "integrated divergence associated
with vertex" as well.
 2018-12-18 12:14:36 +01:00
Laurent Rineau 26335f93b1 Replace delta by delta_gamma, to stick more with the article 
That also introduces the name of the source set.

I have also removed the sentence "over the entire domain M", that was
off-topic, here.
 2018-12-18 12:13:34 +01:00
Laurent Rineau ea3927bb13 Fix the naming of the divergence operator 2018-12-18 12:12:20 +01:00
Andreas Fabri 3dff3df1a2 Remove README 2018-12-11 12:33:11 +01:00
Andreas Fabri 162d74baef Some changes after Sebastien's review 2018-12-11 12:15:16 +01:00
Andreas Fabri 49c0b7899b fix Eigen 3.2 -> 3.3 2018-12-05 08:41:08 +01:00
Andreas Fabri 047938e068 Try to fix warnings (which I cannot reproduce locally) 2018-11-26 10:00:23 +01:00
Andreas Fabri 994b1aa9c6 Fix link to the Solver package 2018-11-26 09:20:31 +01:00
Andreas Fabri 9546044462 Make iDT the default and explain O() complexity 2018-11-20 18:42:23 +01:00
Andreas Fabri d749d3f003 Make iDT the default and explain O() complexity 2018-11-20 18:21:19 +01:00
Andreas Fabri 65e11086a9 Merge branch 'Heat_method_3-GF' of github.com:afabri/cgal into Heat_method_3-GF 2018-11-20 08:38:25 +01:00
Andreas Fabri fd706aa390 Needs Eigen 3.3 or greater 2018-11-20 08:15:36 +01:00
Sébastien Loriot 8f81b45cbf add dependencies 2018-11-16 18:26:51 +01:00
Andreas Fabri 1351746df0 Change project names in CMakeLists 2018-11-15 18:09:39 +01:00
Andreas Fabri 079dce0e54 Remove #includes that are not needed 2018-11-15 08:06:44 +01:00
Sébastien Loriot 73523a9f87 add missing include directive 2018-11-13 12:57:07 +01:00
Andreas Fabri c60b8571e5 Fix test of concept 2018-11-13 09:54:17 +01:00
Andreas Fabri 781191fb2c Make const& 2018-11-13 09:41:39 +01:00
Sébastien Loriot 85e6443992 update requirement 2018-11-12 16:55:06 +01:00
Sébastien Loriot 991e2a453d fix warnings and compilation error + add missing overload 2018-11-12 16:54:16 +01:00
Andreas Fabri 9b4d98b083 rename file 2018-11-12 12:46:30 +01:00
Andreas Fabri 56c6a7946f Add tests 2018-11-12 12:44:44 +01:00
Andreas Fabri f0e6802f74 Changes after Guillaume's review 2018-11-12 09:57:58 +01:00
Andreas Fabri 3f7300283e Changes after Guillaume's review 2018-11-12 09:35:01 +01:00
Andreas Fabri 99d10094c4 Changes after Michael's review 2018-11-09 12:36:49 +01:00
Andreas Fabri b97966f402 clean 2018-11-06 16:43:11 +01:00
Andreas Fabri 79e913a5d7 factor matrices only once 2018-11-06 15:03:08 +01:00
Andreas Fabri 074e31c3d1 rename property map 2018-10-31 15:36:18 +01:00
Andreas Fabri 6d78b5b758 Throw in to_double so that it works with EPEC 2018-10-31 15:30:54 +01:00
Andreas Fabri 74a2020dbf Deal with empty mesh 2018-10-31 15:17:28 +01:00
Sébastien Loriot 3cc96b3c3c use Default for template parameters 2018-10-31 15:08:14 +01:00
Sébastien Loriot c5123bcd29 add input data 2018-10-31 15:08:02 +01:00
Sébastien Loriot 95e30643dd add missing typename 2018-10-31 14:28:11 +01:00
Sébastien Loriot b8be6649ec remove empty lines 2018-10-31 14:17:40 +01:00
Andreas Fabri 2fd7546778 polish 2018-10-31 14:09:06 +01:00
Andreas Fabri 6b8d4a60d9 Polish doc 2018-10-31 13:02:02 +01:00
Andreas Fabri dfe42cb723 No longer use Point_2 2018-10-31 11:59:32 +01:00
Andreas Fabri 470ce56df5 Make it work with Heat_method_traits_3 2018-10-30 22:31:24 +01:00
Andreas Fabri 347fab4d34 V2 2018-10-30 16:15:38 +01:00
Andreas Fabri a6e5e0ef0c Rename header file 2018-10-30 15:12:17 +01:00
Andreas Fabri 0b0611a44a WIP 2018-10-30 15:05:43 +01:00
Andreas Fabri 01eaccc779 Add tparam 2018-10-30 12:09:43 +01:00
Andreas Fabri 924d042e08 Add benchmark section 2018-10-30 12:09:43 +01:00
Andreas Fabri 38bd4bd2b6 Don't resize() as that assembles the matrix and makes add_coef() slow 2018-10-30 12:09:43 +01:00
Andreas Fabri 5d1a322599 Fix typos. Make terrain image complete 2018-10-30 12:09:43 +01:00
Sébastien Loriot b2d9b1b525 cosmetic changes 2018-10-28 16:47:09 +01:00
Sébastien Loriot 3d14b0d804 rename internal variable to be obvious and avoid confusion 2018-10-25 17:05:33 +02:00
Sébastien Loriot a56ac8d03c move get function in the class namespace 2018-10-25 15:39:17 +02:00
Sébastien Loriot df403fd9ce add doc for requirements of copy_face_graph 2018-10-25 11:33:31 +02:00
Sébastien Loriot 8237c6489c remove the vertex point map as template parameter of IDT 
remove useless vertex index map + update test that was AFAIS buggy
 2018-10-25 11:26:14 +02:00
Sébastien Loriot 5eee89a3d6 really use input vertex map 2018-10-25 11:10:53 +02:00
Sébastien Loriot ff10d313e7 remove Intrinsic_Delaunay_Triangulation_3 from the documentation 2018-10-25 10:53:31 +02:00
Sébastien Loriot 8c3ffdf289 keep the input triangle mesh const 2018-10-25 10:34:12 +02:00
Sébastien Loriot 8ecbaa2af3 add a default parameter for traits 2018-10-25 10:22:12 +02:00
Sébastien Loriot 27bfd0521d remove vertex distance map as a data member of Heat_method_3 class 
pass it directly to the update function now renamed fill_distance_map
 2018-10-25 10:06:07 +02:00
Sébastien Loriot e4e8fd93a1 Add a tag to Heat_method_3 to avoid exposing Idt 2018-10-24 17:28:38 +02:00
Sébastien Loriot cb19eeaf00 fix compilation of tests 
some functions have been removed
 2018-10-24 16:24:35 +02:00
Sébastien Loriot 9905c44ccd add missing groups 2018-10-24 14:06:47 +02:00
Sébastien Loriot a465a7c686 fix compilation issues 2018-10-24 14:06:26 +02:00
Sébastien Loriot 72acbee3f5 fix warnings 2018-10-24 11:12:55 +02:00
Andreas Fabri eb51dd4850 Keenan's pass over the User Manual 2018-09-26 16:36:50 +02:00
Andreas Fabri e8224f90c2 typos 2018-09-12 15:17:26 +02:00
Andreas Fabri 3bab5fdad1 polish 2018-09-12 13:09:58 +02:00
Andreas Fabri 150c9c95de Add an example with a Polyhedron_3 2018-09-12 12:27:31 +02:00
Andreas Fabri 159360b1c8 polish 2018-09-12 09:54:13 +02:00
Sébastien Loriot faa4ced589 relates -> sa that was preventing linking 2018-09-12 09:43:17 +02:00
Sébastien Loriot aaefcc0b03 fix INPUT 2018-09-12 09:43:08 +02:00
Sébastien Loriot 9ccff09ae1 protect Eigen include directives 2018-09-12 09:42:41 +02:00
Andreas Fabri 0e3f78b5ba Polish 2018-09-12 08:52:03 +02:00
Andreas Fabri e7740e16e8 Add example with free function and reorder sections in manual 2018-09-11 17:32:53 +02:00
Andreas Fabri b0f758f2fe reformat doc 2018-09-07 13:49:43 +02:00
Andreas Fabri 3705eec8e0 reformat 2018-09-07 13:20:08 +02:00
Andreas Fabri 5be66b1d66 Document free functions 2018-09-07 11:58:12 +02:00
Andreas Fabri d460093a6e Don't pass data members as arguments 2018-09-07 10:22:04 +02:00
Andreas Fabri 63094e0582 no need for parameter 2018-09-06 18:22:21 +02:00
Andreas Fabri cdb24c739f cleanup 2018-09-06 12:07:45 +02:00
Andreas Fabri 8e81c6a5f7 Move code into the trahts class 2018-09-06 09:24:28 +02:00
Andreas Fabri 3580b5a511 Move code into the trahts class 2018-09-05 14:56:07 +02:00
Andreas Fabri d336746cd1 bug fix 2018-09-04 18:06:57 +02:00
Andreas Fabri 4e6293d940 Switch to CGAL::Eigen_matrix 2018-09-04 17:48:42 +02:00
Andreas Fabri 189f8331e8 lower case 2018-09-04 13:52:03 +02:00
Andreas Fabri c5e4f3c02b Start cleanup 2018-09-04 13:50:17 +02:00
Andreas Fabri 2074d71cb8 Start cleanup 2018-09-04 13:38:14 +02:00
Christina Vaz 05a1fee206 Reference Manual and update to User man 2018-08-13 01:59:27 -04:00
Christina Vaz 5ac7990672 figures for User Manual 2018-08-13 00:13:28 -04:00
Christina Vaz 9a1b05643c user manual and examples for it 2018-08-10 17:25:24 -04:00
Christina Vaz 30bc4aa064 Merge branch 'IntrinsicFaceGraph-V2' of github.com:CGAL/cgal-public-dev into IntrinsicFaceGraph-V2 2018-08-08 21:44:14 -04:00
Christina Vaz 3db18ee7ca idt algorithm in user man 2018-08-08 21:43:52 -04:00
Andreas Fabri aff9602e24 small fix 2018-08-08 17:30:14 +02:00
Christina Vaz 8fd05d8031 fix for g10 and g50 2018-08-07 16:04:12 -04:00
Christina Vaz 136c402579 user manual heat method algorithm 2018-08-06 18:09:50 -04:00
Andreas Fabri b6290a48db small improvements 2018-08-06 17:09:23 +02:00
Christina Vaz 62ebde3d2e citations needed and intro of user manual 2018-08-06 01:00:18 -04:00
Andreas Fabri caa96cd941 too much cleanup 2018-08-03 20:26:34 +02:00
Andreas Fabri 9cf644e164 cleanup 2018-08-03 16:22:59 +02:00
Andreas Fabri 7bbf9d73e4 Simplifications 2018-08-03 13:00:14 +02:00
Andreas Fabri 630b3b6beb Add iDT to the demo 2018-08-03 12:07:45 +02:00
Andreas Fabri 5d235167a3 Associate the 2D points to the previous halfedge 2018-08-01 13:46:14 +02:00
Andreas Fabri 1b11c0dd51 Add debug output 2018-08-01 12:55:44 +02:00
Andreas Fabri 1882a74c9c Add BGL style free functions for iDT 2018-07-31 20:40:52 +02:00
Andreas Fabri 532a2ad25a Fixed summation_of_edges() 2018-07-31 17:28:23 +02:00
Andreas Fabri a5fab20aa6 Add idt.cpp 2018-07-31 11:45:34 +02:00
Christina Vaz 794248adaf reference solutions and updated validate to read in reference 2018-07-30 18:31:34 -04:00
Christina Vaz 3a5cf6d8fa edge summation fix 2018-07-30 15:39:08 -04:00
Andreas Fabri b7c741aad4 details 2018-07-26 16:13:51 +02:00
Andreas Fabri 36a16b15b1 Put V2V in its own file 2018-07-26 15:57:16 +02:00
Andreas Fabri 48b03e6b11 start to document 2018-07-26 15:46:32 +02:00
Andreas Fabri 7ccc278a55 Add Heat_method_3::distance() again. @cvaz: Shouldn't that trigger update() 2018-07-26 15:10:10 +02:00
Andreas Fabri a2ee3121c7 remove unused property map 2018-07-26 14:50:42 +02:00
Andreas Fabri b82eb38d2c Fix access to private type 2018-07-26 14:39:51 +02:00
Andreas Fabri 1803393857 Remove unused template parameters 2018-07-26 14:31:01 +02:00
Andreas Fabri b1c663c9f8 Make functions private. Put the testsuite in a class and declare it friend 2018-07-26 14:16:12 +02:00
Andreas Fabri 5d05e84210 Make functions private. Put the testsuite in a class and declare it friend 2018-07-26 14:12:03 +02:00