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4581 Commits

Author SHA1 Message Date
Jane Tournois d060ebe84c cleanup example 2022-09-27 10:35:35 +02:00
Jane Tournois fe590eecd2 remove outdated headers 2022-09-27 10:35:22 +02:00
Sébastien Loriot b0a144c6e7 update examples to the new API 2022-09-26 20:14:26 +02:00
Sébastien Loriot 54a6462273 move code so that we can reinject mesh_3 parameters functions into NFP class 2022-09-26 20:09:58 +02:00
Jane Tournois 0640664129 clean examples and separate with/without features 2022-09-26 09:49:30 +02:00
Jane Tournois 372b7617b0 use weights and features in example 2022-09-23 17:21:14 +02:00
Jane Tournois 1976710f9c add weights input to the labeled image + features domain 2022-09-23 17:21:01 +02:00
Jane Tournois 77a121c1a6 Merge branch 'Mesh_3-fix_weighted_images-GF' into Mesh_3-triple_line_extraction_and_weights-GF 2022-09-23 15:53:14 +01:00
Jane Tournois 6175050c90 Merge branch 'Mesh_3-triple_line_extraction-GF' into Mesh_3-triple_line_extraction_and_weights-GF 
# Conflicts:
#	Mesh_3/examples/Mesh_3/mesh_3D_image_with_detection_of_features.cpp
 2022-09-23 16:26:49 +02:00
Sébastien Loriot db7a4e9945 add missing namespace 2022-09-23 15:21:25 +02:00
Mael Rouxel-Labbé 363d1daaef Some more conversions to non-package specific assertions 2022-09-23 15:20:24 +02:00
Andreas Fabri 6d09a886b2 Remove paragraph in the developer manual; Some fixes 2022-09-23 14:12:53 +01:00
Sébastien Loriot 5592ae55e7 update user manuals 2022-09-23 14:41:08 +02:00
Sébastien Loriot 5023cb90cf do no modify visibility and add macro to hide parts 2022-09-23 14:24:37 +02:00
Sébastien Loriot d191d4474a Revert "fix not documented warnings" 
This reverts commit 8d773c56348c4055d963c57426d60d118915d22b.
 2022-09-23 14:04:51 +02:00
Andreas Fabri d3fca65ae5 CGAL: No longer per package assertions 2022-09-23 12:49:40 +01:00
Sébastien Loriot 6397378bdc fix not documented warnings 2022-09-23 13:29:40 +02:00
Jane Tournois 0f4ac2bd04 remove debug macro from example code 2022-09-22 14:05:59 +02:00
Jane Tournois af908bea25 use ITK DiscreteGaussianImageFilter with variance = 1 voxel 
sigma parameter is difficult to use for end user
 2022-09-22 12:48:46 +02:00
Sébastien Loriot 56ee7b3deb add missing include directive 2022-09-21 18:36:00 +02:00
Sébastien Loriot d2cd6244ff clean up Periodic_3_mesh_3 doc 2022-09-21 17:20:29 +02:00
Laurent Rineau 2c6ab3ca51
Update Labeled_mesh_domain_3.h 
[skip ci]
 2022-09-21 15:49:19 +02:00
Sébastien Loriot 6b07cbdadd clean up Mesh_3 internal parameters 2022-09-21 15:45:14 +02:00
Laurent Rineau 6e38d8735d
Update Labeled_mesh_domain_3.h 2022-09-21 15:28:04 +02:00
Laurent Rineau 37538968b6
Now four, and not three 2022-09-21 15:25:25 +02:00
Sébastien Loriot 6505bb7d39 fix parameters 2022-09-21 11:49:28 +02:00
Sébastien Loriot 70468210a4 fix indentation 2022-09-21 10:18:21 +02:00
Sébastien Loriot d8f0bc4c08 dedicated macro for precondition 2022-09-21 09:42:32 +02:00
Sébastien Loriot 681120764e please the CI with a new macro 2022-09-21 09:36:41 +02:00
Sébastien Loriot 74b90ca71b fix links 2022-09-20 18:09:53 +02:00
Sébastien Loriot b740c31bc1 clean up make_mesh_3 and refine_mesh_3 2022-09-20 18:03:47 +02:00
Sébastien Loriot bab2d0c280 clean up perturb_mesh_3 2022-09-20 16:02:10 +02:00
Sébastien Loriot e6c8854260 clean up odt_optimize_mesh_3 2022-09-20 15:55:05 +02:00
Jane Tournois 8c09f72039 add debug code 2022-09-20 15:54:54 +02:00
Sébastien Loriot e23d77bbf7 clean lloyd_optimize_mesh_3 2022-09-20 14:27:30 +02:00
Sébastien Loriot 928ef0b447 clean up exude_mesh 2022-09-20 14:26:56 +02:00
Sébastien Loriot d5a82f3412 clean up Mesh_criteria 2022-09-20 14:03:13 +02:00
Sébastien Loriot b1610e10a7 fix Labeled_mesh_domain_3 doc and add missing backward compatibility functions 2022-09-19 21:32:02 +02:00
Sébastien Loriot 4cb97e0767 do not use deprecated API 2022-09-19 08:48:10 +02:00
Sébastien Loriot 0f4fa7d8bf do not use deprecated API 2022-09-19 06:47:43 +02:00
Sébastien Loriot 457877b21b mark the function as deprecated 2022-09-19 06:38:09 +02:00
Sébastien Loriot 28c583ce17 disambiguate and mark it as deprecated 2022-09-19 06:29:37 +02:00
Sébastien Loriot 4701aadf1d add missing include directives for CI 2022-09-16 17:00:26 +02:00
Sébastien Loriot acf2a7ecdf try to present backward compatibility 2022-09-16 16:54:58 +02:00
Sébastien Loriot 0e62685f39 force images to be taken by reference 2022-09-16 14:36:06 +02:00
Sébastien Loriot 953b01db1f regroup code for named parameters 2022-09-15 15:10:12 +02:00
Sébastien Loriot 793f446e19 whitespace 2022-09-15 13:11:32 +02:00
Sébastien Loriot e085a47b19 fix doc warnings/errors in Mesh_3 2022-09-15 12:49:13 +02:00
Sébastien Loriot dfc24f98d8 move header before documenting it 2022-09-15 09:49:28 +02:00
Mael Rouxel-Labbé 6f187f332c Misc minor fixes/improvements 2022-09-14 14:08:23 +02:00
GYuvanShankar 7b30693cd7 More testsuite/polyhedron fixes 2022-09-07 17:57:34 +05:30
Mael Rouxel-Labbé 9b265fddf8 Uniformize REQUIRED / QUIET usage: 
Following this:
- CGAL: always REQUIRED
- CGAL component: COMPONENT / OPTIONAL_COMPONENT (never QUIET)
- required 3rd party: (not QUIET) + message(NOTICE "") on NOT_FOUND
- optional 3rd party: QUIET + message(STATUS "") except for Polyhedron/demo
- 3rd party components: COMPONENT / OPTIONAL_COMPONENT
                        (QUIET depending on required or optional 3rd party)
 2022-09-06 16:24:27 +02:00
Mael Rouxel-Labbé 4fc486b195 Purge CMakeLists.txts from obsolete code / noise 2022-09-06 16:19:11 +02:00
Mael Rouxel-Labbé 7cb21c24b0 Uniformize message() for missing 3rd party libraries 
STATUS for non-essential, NOTICE for important stuff
 2022-09-06 16:07:31 +02:00
Mael Rouxel-Labbé 28ba446895 Clean (some) CMakeLists.txt indentation 2022-09-06 15:38:18 +02:00
Laurent Rineau 67a5a69e7f Revert "temporarily replace explicit call to kernel" 
This reverts commit 43ef4e35ba.
 2022-08-25 10:29:04 +02:00
GYuvanShankar 620a8f204c Fixed named parameters not found error 2022-08-23 15:43:26 +05:30
GYuvanShankar 530d6e0f78 Fixed tests not running in Mesh_3 2022-08-23 14:58:15 +05:30
Laurent Rineau e7ffd0b943 New patch 
This patch removes the cause of filter failures of `Compare_distance_3`, and
keep the exactness.
 2022-08-19 15:25:28 +02:00
GYuvanShankar ce44ebf64d Documentation change, removed BOOST_PARAMETER_MAX_ARITY macro 2022-08-17 18:03:26 +05:30
Sébastien Loriot fe5befbf25 remove whitespace 2022-08-16 18:07:14 +02:00
Sébastien Loriot ad6329c263 Merge 'cgal/master' into gsoc2022-boost_np 2022-08-16 17:52:18 +02:00
Jane Tournois 43ef4e35ba temporarily replace explicit call to kernel 
there are more than 90% filter failures in calls to
Compare_distance_3()(Point_3, Segment_3, Point_3)

this commits divides by 10 the initialization (protecting ball
placement) time, at least on polyhedral surfaces input
 2022-08-11 15:32:18 +02:00
GYuvanShankar 02ddb5c1c3 Documentation for mandatory parameters 2022-08-08 14:36:26 +05:30
Jane Tournois 5768339d5c remove the "more than 3 subdomains" filter 2022-08-04 12:47:23 +02:00
Sébastien Loriot 861588abe1 Merge 'sloriot/CGAL-std_type_traits' into master 2022-08-03 20:19:51 +02:00
Sébastien Loriot e063ac1e2d add missing polylines 2022-08-01 14:58:51 +02:00
Jane Tournois e2f9887ad8 Merge remote-tracking branch 'cgal/master' into Mesh_3-triple_line_extraction-GF 
# Conflicts:
#	Installation/CHANGES.md
 2022-07-28 16:07:22 +02:00
Sébastien Loriot e532260914 fix compilation issues 2022-07-27 18:42:38 +02:00
GYuvanShankar 1ee7340343 Removed np for mandatory param for certain fns 2022-07-27 20:16:47 +05:30
Sébastien Loriot 8a13b7fbeb Add missing NP only version 
also remove other constructors that does not seem needed
 2022-07-27 12:07:27 +02:00
Sébastien Loriot 19c146b6e2 add deprecated compatibility version 2022-07-27 12:07:08 +02:00
Sébastien Loriot f2aeaf710b use Named_parameters for variadic specialization 2022-07-27 11:24:26 +02:00
Sébastien Loriot 6802528cd6 make it uniform 2022-07-27 11:07:28 +02:00
Sébastien Loriot b9f9b0d12b remove debug macro 2022-07-25 13:37:08 +02:00
Sébastien Loriot e0f99d3c77 fix template parameter 2022-07-22 08:57:04 +02:00
Sébastien Loriot 5ad476997d workaround MVC2015 bug 2022-07-22 08:56:37 +02:00
Sébastien Loriot 4f4f410990 "link" with Eigen 2022-07-22 08:50:59 +02:00
GYuvanShankar cafe5b1817 Removed deprecated docs/warnings 2022-07-19 14:10:05 +05:30
GYuvanShankar 520545d543 Named parameter for mandatory parameters DRAFT 2022-07-19 13:10:35 +05:30
GYuvanShankar 78afe0c76e Moved named parameter specific code to seperate file 2022-07-14 12:34:50 +05:30
Sébastien Loriot 1e857506c1 Merge remote-tracking branch 'cgal/5.5.x-branch' 2022-07-12 18:22:02 +02:00
Sébastien Loriot 12795ba29c Merge remote-tracking branch 'cgal/5.4.x-branch' into HEAD 2022-07-12 18:21:16 +02:00
Sébastien Loriot c32e2b1416 use operator|| 2022-07-12 18:18:34 +02:00
Sébastien Loriot 493795f95d also accomodate older versions of clang 2022-07-12 18:18:34 +02:00
Sébastien Loriot ad1e333538 handle older GCC versions 2022-07-12 18:18:34 +02:00
Sébastien Loriot 45b5fd43f8 fix more warnings 2022-07-12 18:18:34 +02:00
GYuvanShankar 3c5299dd94 Changed missed out calls 2022-07-05 20:45:04 +05:30
GYuvanShankar 996985126c Changed some functions to pass without specifying param. name 2022-07-05 20:33:49 +05:30
Sébastien Loriot 18f3d6e35b add missing inline 2022-07-01 10:12:23 +02:00
Sébastien Loriot 93590720b7 remove trailing whitespaces 2022-07-01 09:58:42 +02:00
Christopher Nicol 96ead54e16 trailing spaces deleted, unused variable removed. 2022-07-01 09:26:23 +02:00
Christopher Nicol 3470370807 Addition of the 4-5-6-7-8 colors cases 2022-06-30 15:26:09 +02:00
Jane Tournois 17b760a8ea rename outdated header protection macros 2022-06-30 12:18:49 +02:00
Jane Tournois 70bc1b34cf remove verbose macro 2022-06-30 12:09:55 +02:00
Jane Tournois d44a54d59b we detect triple lines, not sharp features 2022-06-30 10:22:42 +01:00
Jane Tournois 8a14b52465 fix header protection macro 2022-06-30 10:22:42 +01:00
Jane Tournois 41143915e4 typo 
Co-authored-by: Laurent Rineau <Laurent.Rineau@cgal.org>
 2022-06-30 10:22:42 +01:00
Jane Tournois 3e081a2497 remove unused typedef 2022-06-30 10:22:41 +01:00
Sébastien Loriot bff69397b6 add missing case and start/end indices 2022-06-30 10:22:41 +01:00
Sébastien Loriot 3a7a0e155c add all cases in the table + add placeholders for sampling curves of all cases. 2022-06-30 10:22:41 +01:00
Jane Tournois 149ee2abaa rename headers, internal functions and directory 2022-06-30 10:22:41 +01:00
Sébastien Loriot a30f4fe644 fix invalid endpoint 2022-06-30 10:22:41 +01:00
Jane Tournois 2d4a64495d doc : add function to header of Labeled_mesh_domain_3 2022-06-30 10:22:41 +01:00
Jane Tournois 538f200170 improve doc 2022-06-30 10:22:40 +01:00
Jane Tournois 495f11c1a3 improve the test for create_labeled_image_mesh_domain_with_features 2022-06-30 10:21:58 +01:00
Jane Tournois ca085181ed doc example 2022-06-30 10:21:58 +01:00
Jane Tournois 7ea5827447 add test (failing) 2022-06-30 10:21:58 +01:00
Jane Tournois 773cfb6280 add doc for create_labeled_image_mesh_domain_with_features 2022-06-30 10:21:57 +01:00
Jane Tournois b69fd9bf30 add missing include header 2022-06-30 10:21:53 +01:00
Jane Tournois 9fd17a85dd avoid circular includes 2022-06-30 10:20:55 +01:00
Jane Tournois 781541b9e7 attempt to fix CI check_headers error 2022-06-30 10:20:19 +01:00
Jane Tournois ed8286307a add missing inline's causing multiple definitions link errors in the demo 2022-06-30 10:20:19 +01:00
Jane Tournois cc411375a5 fix g++ compilation error 2022-06-30 10:20:19 +01:00
Jane Tournois 755c403f94 remove useless template parameter 2022-06-30 10:20:18 +01:00
Jane Tournois 223ea3cf6e move Null_subdomain_index up to have definitions in a valid order 2022-06-30 10:20:18 +01:00
Jane Tournois 102b79a6aa fix missing brackets warning for clang 2022-06-30 10:20:18 +01:00
Jane Tournois e80f628e2b add create_labeled_image_mesh_domain_with_features(image) 
and do not document the detect_triple_lines() function
 2022-06-30 10:20:18 +01:00
Jane Tournois 588493c3c5 add missing 's' 2022-06-30 10:20:17 +01:00
Jane Tournois 8de92cf4ac int * CGAL::square() 
fixes error
error: no match for ‘operator*’ (operand types are ‘int’ and ‘CGAL::Null_functor::result_type’ {aka ‘CGAL::Null_tag’})
 2022-06-30 10:20:17 +01:00
Jane Tournois cc9661171b add missing include 2022-06-30 10:20:17 +01:00
Jane Tournois a538aa9523 remove more é 2022-06-30 10:20:17 +01:00
Jane Tournois 607b2e5d19 remove é 2022-06-30 10:20:17 +01:00
Jane Tournois 3eeffaee4e add missing license include 2022-06-30 10:20:16 +01:00
Jane Tournois 018f9cc656 make clear what should or should not be unsigned char 
get Word from Word_type, and use an unsigned integral type to
be able to use it as an index in a table

Separate the types Word_type and Word (convert from CGAL Image_3 labels
into the Word format)
 2022-06-30 10:20:16 +01:00
Jane Tournois 715295fdc8 add license headers, and add namespaces 2022-06-30 10:20:16 +01:00
Jane Tournois 0e04ec9d5c add word type as template parameter 2022-06-30 10:20:15 +01:00
Jane Tournois 23d8288206 add license header and namespaces 2022-06-30 10:20:15 +01:00
Jane Tournois a5563fc5fc move code back to internal header 2022-06-30 10:20:15 +01:00
Jane Tournois 7d9ea52032 move triple lines detection code to new header 2022-06-30 10:20:15 +01:00
Jane Tournois ee436bc050 apply missing translation (tx, ty, tz) 2022-06-30 10:20:15 +01:00
Jane Tournois 47046a0ec4 fix indentation 2022-06-30 10:20:14 +01:00
Jane Tournois cc97d1015f start refactoring 2022-06-30 10:20:14 +01:00
Jane Tournois 097897182d add missing license 2022-06-30 10:20:14 +01:00
Jane Tournois d14ab9c91a add detection of triple lines from labeled images 
for tet meshing with features
 2022-06-30 10:20:14 +01:00
GYuvanShankar 4457b05350 Removed _new prefix from named parameters 2022-06-29 17:38:54 +05:30
Laurent Rineau 755c9d5d42 Merge pull request #6646 from lrineau/Installation-optional_ASAN-GF 
Use ASAN optionally
 2022-06-29 09:52:15 +02:00
Sébastien Loriot 1a4a6816ac Merge pull request #6084 from janetournois/PMP-add_surface_mesher-jtournois 
PMP - add surface remeshing from Mesh_3
 2022-06-29 09:20:10 +02:00
GYuvanShankar 7a080f9b92 New API support and doc for Mesh_criteria_3.h 2022-06-29 12:28:41 +05:30
GYuvanShankar 60f7a5c7cf New API support and docs for Labeled_mesh_domain_3.h 2022-06-27 20:26:35 +05:30
Andreas Fabri 70a06b4696 Do not use CGAL::iterator_v<> as it is responsible for the ICE of VC2015 2022-06-27 08:58:17 +01:00
GYuvanShankar 5a8d90019e New API support and docs for optimize_periodic_3_mesh_3.h 2022-06-21 18:45:25 +05:30
GYuvanShankar 109d74466d New API support and docs for make_mesh_3.h 2022-06-21 14:11:49 +05:30
GYuvanShankar 93514bd826 New API support and doc for refine_mesh_3.h 2022-06-20 18:31:49 +05:30
Laurent Rineau 5a038abf34 Fix a CMake bad code 
https://cmake.org/cmake/help/latest/command/if.html#command:if
> `if(ENV{some_var})` will always evaluate to false.
 2022-06-20 09:55:12 +02:00
GYuvanShankar 0af311c0b3 New API support and docs for perturb_mesh_3.h 2022-06-17 14:30:25 +05:30
GYuvanShankar d0d64efe30 New API support and doc for lloyd_optimize_mesh_3.h 2022-06-16 20:34:46 +05:30
Sébastien Loriot 4015911aeb doc value type of default vpm for the output mesh 2022-06-16 13:39:47 +02:00
GYuvanShankar 2555a3e3b8 Real_timer to 2022-06-15 13:48:35 +05:30
GYuvanShankar 89c07e7718 New API support and doc for odt_optimize_mesh_3.h 2022-06-15 13:31:45 +05:30
Jane Tournois 7b30c01ff3 apply Laurent's review 2022-06-14 15:53:09 +02:00
GYuvanShankar 11341ed33d Support for docs 2022-06-14 19:11:44 +05:30
Laurent Rineau 9bf73ee910 Improve links 2022-06-13 16:27:43 +02:00
Laurent Rineau c132b6a11e Merge remote-tracking branch 'cgal/master' into Mesh_data_structure_3-new_package-jtournois 2022-06-13 16:26:34 +02:00
GYuvanShankar e213a90451 Fixed problem running testsuite 2022-06-12 10:34:41 +05:30
Sébastien Loriot b96f6d5ce9 move is_iterator to type_traits 2022-06-10 09:43:59 +02:00
Sébastien Loriot 44250cb019 is_iterator_XXX<>::value --> is_iterator_XXX_v<> 2022-06-10 09:40:29 +02:00
Sébastien Loriot 5872413f37 remove boost is_same headers 2022-06-10 08:48:53 +02:00
Sébastien Loriot 3fa436459d BOOST_MPL_ASSERT -> static_assert 2022-06-10 08:46:01 +02:00
Sébastien Loriot ac8b6d4731 boost::is_same --> std::is_same 2022-06-10 08:18:20 +02:00
Sébastien Loriot 4f5f8341cc use std::enable_if_t 2022-06-10 07:37:53 +02:00
GYuvanShankar f3d81b114f Removed unnecessary files caused due to testing 2022-06-09 14:49:20 +05:30
GYuvanShankar e6619ab67b Provided new API support for exude_mesh_3 2022-06-09 14:25:33 +05:30
Jane Tournois b6a448461a comment unused name 2022-06-08 23:25:54 +02:00
Jane Tournois 8e1cb89989 move test data to SMDS_3 2022-06-08 23:25:53 +02:00
Sébastien Loriot eee363df27 Merge cgal/master 2022-06-08 23:23:07 +02:00
Sébastien Loriot 5746e59b34 Merge cgal/master 2022-06-08 23:13:25 +02:00
Jane Tournois 3483e1acd5 remove SMDS_3 config file 2022-06-08 23:03:50 +02:00
Jane Tournois a6b48224e7 move sliver cache to RemeshingCellBase_3 2022-06-08 23:02:40 +02:00
Jane Tournois 952aed38bb MeshCellBase_3 and MeshVertexBase_3 derive from their simplicial counterparts 2022-06-08 23:02:39 +02:00
Jane Tournois 5fdd061919 add sliver cache to MeshCellBase_3 concept 2022-06-08 23:02:39 +02:00
Jane Tournois 35cec9d95a fix file location 2022-06-08 23:02:39 +02:00
Jane Tournois ea951db4ec keep on renaming TMDS_3 to SMDS_3 2022-06-08 22:57:25 +02:00
Jane Tournois 5bc9792321 reorder dependencies 2022-06-08 22:57:25 +02:00
Jane Tournois bccae527c0 move file back to Mesh_3 2022-06-08 22:57:25 +02:00
Jane Tournois 27e034638a move license and config back to Mesh_3 2022-06-08 22:57:25 +02:00
Jane Tournois f934c2514e create new concepts and models SimplicialMeshCellBase_3 and SimplicialMeshVertexBase_3 
todo : document concepts and models
 2022-06-08 22:57:25 +02:00
Jane Tournois 355b52d21f rename TMDS_3 to SMDS_3, end. 2022-06-08 22:57:25 +02:00
Jane Tournois c27c011e28 do not dump medit file after each meshing test 
it is costly and useless for the testsuite
we keep them commented to help later debugging
 2022-06-08 22:57:24 +02:00
Jane Tournois 55728c5042 avoid using deprecated output_to_medit() function 2022-06-08 22:57:24 +02:00
Jane Tournois c0f8245e5a add compatibility headers for documented headers 2022-06-08 22:57:24 +02:00
Jane Tournois 327d7f3a0f add ref 2022-06-08 22:53:18 +02:00
Sébastien Loriot c8cbbbfb1d Merge cgal/master 2022-06-08 22:49:25 +02:00
Jane Tournois b433037196 fix order of parameters in concept to be consistent with classes 2022-06-08 22:45:20 +02:00
Jane Tournois 4d43e39d10 move headers to TMDS_3 
add TMDS_3/config.h
and update includes
 2022-06-08 22:45:20 +02:00
Jane Tournois 8d9620db50 fix includes 2022-06-08 22:45:20 +02:00
Jane Tournois a878d3d0eb move header to TMDS_3 
to avoid dependency on Mesh_3 for Tetrahedral_remeshing
 2022-06-08 22:45:20 +02:00
Jane Tournois a76e3bb93f move cell and vertex base headers to TMDS_3 
to avoid dependency on Mesh_3 for tet remeshing
 2022-06-08 22:45:20 +02:00
Jane Tournois 0c93c3b3f8 fix dependency name 2022-06-08 22:45:20 +02:00
Jane Tournois 60fc37d5c5 move internal/TMDS_3 to TMDS_3/internal 2022-06-08 22:45:20 +02:00
Sébastien Loriot 5e124e5d5f Merge cgal/master 2022-06-08 22:43:17 +02:00
Jane Tournois e875524608 more doc fixes 2022-06-08 22:35:50 +02:00
Jane Tournois 28660da783 doc MDS_3 -> TMDS_3 2022-06-08 22:35:50 +02:00
Jane Tournois 95b3da51cf move all MDS_3 to TMDS_3 (with T for Tetrahedral) 2022-06-08 22:35:50 +02:00
Jane Tournois 094e3afea2 more doc fixes 2022-06-08 22:15:10 +02:00
Jane Tournois 71a63e01f8 remove IO from Mesh_3, since they moved to MDS_3 2022-06-08 22:11:43 +02:00
Jane Tournois 7aa5e7759c documentation of IO 2022-06-08 22:11:43 +02:00
Sébastien Loriot f0fc06b998 Merge cgal/master 2022-06-08 22:10:34 +02:00
Sébastien Loriot 871973d370 merge cgal/master 2022-06-08 22:00:35 +02:00
Sébastien Loriot 920c35c30e Merge cgal/master 2022-06-08 21:56:39 +02:00
Jane Tournois 38561b78c4 fix make_mesh_3 and refine_mesh_3 documentation 2022-06-08 21:48:32 +02:00
Laurent Rineau 37d1f118da Add a link to the section in MDS_3 2022-06-08 21:46:52 +02:00
Jane Tournois fc525132e4 fix dependencies - code and doc 2022-06-08 21:46:52 +02:00
Jane Tournois e0335e3e5e move everything about C3t3 to new package MDS_3 2022-06-08 21:46:51 +02:00
Jane Tournois 4575d8919c move concept 2022-06-08 21:46:51 +02:00
Jane Tournois e86c4027af move C3T3 headers to MDS_3 new package 
MDS_3 is "3D Mesh Data Structure"
 2022-06-08 21:46:50 +02:00
Jane Tournois 675d5f4ff9 there is no need to disable/enable warnings here 2022-06-07 09:58:16 +02:00
Jane Tournois 06f84573bd fix warning 
warning: moving a local object in a return statement prevents copy elision
 2022-06-07 09:57:42 +02:00
Andreas Fabri ab0c0b96de Remove unused typedef 2022-06-06 15:16:23 +01:00
Sébastien Loriot 18039c7a71 add overload using named function parameters 
freeze_bound is still commented for now as the conflict with
boost parameters must be handled
 2022-06-04 13:56:45 +02:00
Jane Tournois 70f5981aac fix compilation using new is_default_parameter::value 2022-06-02 10:06:53 +02:00
Jane Tournois 86c9a35c15 Merge remote-tracking branch 'cgal/master' into PMP-add_surface_mesher-jtournois 2022-06-02 08:25:30 +01:00
Jane Tournois 1f75a4038c introduce new criterion visitor for size lower bound 2022-05-27 17:19:40 +02:00
Jane Tournois 446c77b8c9 use is_lower_bound to differentiate criterion 2022-05-27 16:35:34 +02:00
Jane Tournois 45c5767fb0 add parameter to specify in uniform sizing that it is a lower bound 2022-05-27 15:47:28 +02:00
Jane Tournois 4c97f7ba4a add minimal bound radius parameter 2022-05-27 14:50:33 +02:00
Jane Tournois 8ce197ec3d transform visit() into template functions 
to prepare derivation of criterion visitor
 2022-05-27 14:42:10 +02:00
Jane Tournois b6fb247f41 add new parameters for minimal size 2022-05-27 14:36:08 +02:00
Sebastien Loriot 6f64ba954f
Merge pull request #6603 from sloriot/Doc-example_path 
Clean up EXAMPLE_PATH
 2022-05-26 18:10:00 +02:00
Sebastien Loriot 7924273cab
Merge pull request #6448 from janetournois/Mesh_3-fix_weights_doc-jtournois 
Mesh_3::generate_label_weights - add documentation group
 2022-05-26 18:08:14 +02:00
Sébastien Loriot ff16bec071 clean up EXAMPLE_PATH 2022-05-23 16:52:17 +02:00
Jane Tournois 533bb05041 fix early return type 2022-05-10 09:46:41 +02:00
Sebastien Loriot b4ffa85e86
Fix typos 
Co-authored-by: Mael <mael.rouxel.labbe@geometryfactory.com>
 2022-05-09 17:47:53 +02:00
Jane Tournois 09940df90d Merge branch 'PMP-add_surface_mesher-jtournois' of github.com:janetournois/cgal into PMP-add_surface_mesher-jtournois 2022-05-09 16:57:54 +02:00
Jane Tournois 5d263f6f45 add a template parameter for the output mesh 2022-05-09 16:57:43 +02:00
Jane Tournois f3713da161 the input mesh does not need to be mutable 2022-05-09 13:57:27 +02:00
Laurent Rineau 734c96e951 Merge branch 'master' into pr/lrineau/6558 2022-05-06 16:25:32 +02:00
Laurent Rineau 2f243c44e9 Merge pull request #6525 from janetournois/Mesh_3-fix_polylines_to_protect_angle-jtournois 
CGAL::Mesh_3::polylines_to_protect with angle bound - bug fix
 2022-05-06 14:21:56 +02:00
Laurent Rineau 2288225448 Massive update of CMake policies to version 3.23 2022-05-06 09:34:35 +02:00
Jane Tournois 4e449d2722
Update Mesh_3/include/CGAL/Polygon_mesh_processing/surface_Delaunay_remeshing.h 
Co-authored-by: Sebastien Loriot <sloriot.ml@gmail.com>
 2022-05-05 16:00:51 +02:00
Laurent Rineau 83fb998a66 Fix the non-determinism 2022-05-04 17:15:39 +02:00
albert-github ce43043735 issue #6539 Mesh3: unreachable page of ircad 
Corrected reference to ircad
 2022-04-30 13:47:24 +02:00
Jane Tournois 613eb6a2cf doc 2022-04-29 15:57:41 +02:00
Jane Tournois 56b03c8abf fix the use of reference type 2022-04-29 15:43:19 +02:00
Jane Tournois 65c03a5acf reorganize feature detection section 2022-04-29 15:19:54 +02:00
Jane Tournois 59e8aa85b6 Fix return type of get_parameter_reference (use traits::reference, not const auto&) 2022-04-29 14:00:58 +02:00
Jane Tournois f0022a5e21 change API to return triangulation instead of modifying Tr& out 
and fix compilation errors after merging master
 2022-04-29 13:53:39 +02:00
Jane Tournois c21fe46525 Merge remote-tracking branch 'cgal/master' into PMP-add_surface_mesher-jtournois 
# Conflicts:
#	Polygon_mesh_processing/doc/Polygon_mesh_processing/PackageDescription.txt
#	Polygon_mesh_processing/examples/Polygon_mesh_processing/CMakeLists.txt
 2022-04-29 10:48:08 +02:00
Laurent Rineau 6f6eded0e1 Merge pull request #6492 from MaelRL/P3M3-Better_output-GF 
Fix C3T3_facets_to_TM conversion for periodic meshes
 2022-04-27 16:32:01 +02:00
Laurent Rineau 6d2a3dc772 Merge pull request #6492 from MaelRL/P3M3-Better_output-GF 
Fix C3T3_facets_to_TM conversion for periodic meshes
 2022-04-27 16:30:51 +02:00
Jane Tournois 74540b0b01 min should be max 
90 is a conservative lower bound on angle bound
 2022-04-26 15:32:02 +02:00
Andreas Fabri 61e36373aa Mesh_3: Suppress a clang warning 2022-04-25 14:04:11 +01:00
Mael ab03816081
Also put `Vertex_handle` typedef behind `CGAL_assertion_code` 2022-04-20 10:26:26 +02:00
Sébastien Loriot 4fc9fe5ffc fix warning 2022-04-19 20:27:45 +02:00
Mael Rouxel-Labbé 4b82575b30 Fix C3T3_facets_to_TM conversion for periodic meshes 2022-04-15 14:11:41 +02:00
Sébastien Loriot 3782f7637d Merge pull request #6402 from janetournois/Mesh_3-polylines_to_protect_angle-jtournois 
Mesh_3 - add tunable angle to `Angle_tester` for `polylines_to_protect()`
 2022-03-30 08:04:06 +02:00
Jane Tournois f89a6e4ce8 test if angle is acute, and then if smaller than the input angle 
if angle at p is acute, then v should be considered as a terminal
vertex to ensure termination
 2022-03-22 15:25:43 +01:00
Jane Tournois 5913be0db8 add documentation group 2022-03-22 12:13:42 +01:00
albert-github b67a35c8f0 Mesh_3: correcting gforge address 
Replacing the address http://inrimage.gforge.inria.fr/ by https://www-pequan.lip6.fr/~bereziat/inrimage/ as Forge is definitively shutdown.
 2022-03-21 10:18:30 +01:00
Jane Tournois 36e95ddc3f use add_triple_line_features header 2022-03-21 09:13:14 +01:00
Jane Tournois a69bb89564 move triple line detection function to new header 2022-03-18 19:55:52 +01:00
Jane Tournois cfd0fd2201 add missing default constructor 2022-03-11 10:40:14 +01:00
Jane Tournois 8e0b41bf7e add tunable angle to Angle_tester for polylines_to_protect() 2022-03-11 08:27:03 +01:00
Laurent Rineau 33635fff6d Fix warning 
> test/Mesh_3/test_meshing_polyhedron_with_features.cpp:57:27: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers]
>    57 |       constexpr auto nb = static_cast<decltype(str_size)>(10000);
>       |                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 2022-02-25 15:28:53 +01:00
Laurent Rineau fc7f67269f Make two programs less verbose 
Fix #6353
 2022-02-24 15:41:47 +01:00
Jane Tournois 49a0ff3fb5 use weight value for readability 2022-02-16 15:38:15 +01:00
Jane Tournois 79bb343c9e get debug code outside of loop 2022-02-16 12:39:24 +01:00
Jane Tournois cd5e85a9e9 indentation 2022-02-16 11:35:31 +01:00
Jane Tournois cdf9849c57 set all neighbors to 1 to avoid dealing with weights in feature detection 2022-02-16 10:10:48 +01:00
Jane Tournois 9bb393ee11 fix loop 2022-02-15 18:41:32 +01:00
Jane Tournois f7aef4aaca experiments to deal with triple lines extraction and weights 2022-02-15 18:30:57 +01:00
Jane Tournois a2abc9b9e0 fix second template parameter 2022-02-15 15:29:56 +01:00
Jane Tournois 2c14df7dd5 make kd tree mutable 2022-02-15 15:29:31 +01:00
Laurent Rineau 9afc773df1 Merge pull request #6012 from janetournois/Mesh_3-isolated_vertices-jtournois 
Mesh_3 - add `remove_isolated_vertices_in_mesh_3()`
 2022-02-02 16:38:24 +01:00
Laurent Rineau f9c05a0ba1 Merge pull request #6253 from afabri/P2T2-assert-GF 
CGAL:   In testcode do not use CGAL_assertion  but assert
 2022-02-02 16:38:22 +01:00
Laurent Rineau 5b42a501cc Merge pull request #6266 from afabri/CGAL-assertions_in_examples-GF 
CGAL Examples: CGAL_assertion ->  assert

# Conflicts:
#	HalfedgeDS/examples/HalfedgeDS/hds_prog_compact2.cpp
#	Triangulation_2/examples/Triangulation_2/triangulation_print_OFF.h
 2022-02-02 16:38:01 +01:00
Sébastien Loriot 593ff5371c Merge remote-tracking branch 'cgal/master' into HEAD 2022-02-01 20:11:27 +01:00
Andreas Fabri c7730920cf untabify 2022-01-24 10:27:38 +00:00
Andreas Fabri 79a38d5cb9 CGAL Examples: CGAL_assertion -> assert 2022-01-24 10:19:04 +00:00
Laurent Rineau a22b459637 Merge pull request #6259 from afabri/Mesh_3-permissive-GF 
Mesh_3: Fixes for VC++ with option /permissive-
 2022-01-21 16:08:30 +01:00
Andreas Fabri ade80dcf4d Fix initialisation of atomic 2022-01-20 08:44:38 +00:00
Andreas Fabri d4f9be848c Mesh_3: Fixes for VC++ with option /permissive- 2022-01-19 13:58:51 +00:00
Andreas Fabri 5259a2317a Deal with Mesh_3 2022-01-18 18:58:06 +00:00
Sébastien Loriot c169c41240 Merge remote-tracking branch 'maxGimeno/PMP-Example_of_new_mp_function-maxGimeno' into HEAD 2022-01-12 13:33:49 +01:00
Laurent Rineau 398e71d37d Merge pull request #6155 from sloriot/STL_extension-Modifiable_priority_queue_clean_up 
Add option to use a relaxed order
 2022-01-12 12:21:53 +01:00
Sébastien Loriot 1c3e09f562 rename internal namespace 
default_values -> default_values_for_mesh_3
 2022-01-10 18:36:32 +01:00
Sébastien Loriot 1e7785b427 do not use PMP::parameters namespace 2022-01-04 16:00:38 +01:00
Laurent Rineau 7cada272e8
Merge pull request #6124 from janetournois/Mesh_3-polyhedral_complex_in_demo-GF 2022-01-03 16:48:37 +01:00
Laurent Rineau 7e0f325f87 Merge pull request #6196 from MaelRL/Mesh_3-Remove_trailing_semicolon-GF 
Fix: remove extra ';'
 2022-01-03 16:26:05 +01:00
Laurent Rineau 2c777708d2 Merge pull request #6196 from MaelRL/Mesh_3-Remove_trailing_semicolon-GF 
Fix: remove extra ';'
 2022-01-03 16:22:18 +01:00
albert-github 245aa559e3 Warnings Mesh_3 regarding non existing file (documentation) 
cherry-picked from 72e2c7b27b

Currently we get a number of warnings when building the documentation for Mesh_3:
```
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:743: warning: unable to resolve reference to 'CGAL/Mesh_3/initialize_triangulation_from_labeled_image.h\' for \ref command
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:801: warning: unable to resolve reference to 'Mesh_3/random_labeled_image.h\' for \ref command
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:817: warning: unable to resolve reference to 'CGAL/Mesh_3/initialize_triangulation_from_gray_image.h\' for \ref command
```
Note the backslash at the end of the file name.

Most likely an attempt was made to escape the dot to not have it as part of the filename, though at least in doxygen 1.8.13 a closing dot was not seen as part of the filename.
Looking at the other escape character of doxygen: the commercial at sign, this was apparently working as escape in the filename as well, though in doxygen 1.8.15 this was not the case anymore either.
During one of the last changes also the backslash lost this possibility for this case and this is now consistent.

The current change (removing the backslashes) doesn't look like to alter the behavior for the 1.8.13 and master version in respect to CGAL.
 2021-12-27 08:38:49 +01:00
Mael Rouxel-Labbé 91d862d997 Remove extra ';' 2021-12-23 11:58:28 +01:00
Jane Tournois 4f5f83acbf rename delaunay_remeshing to surface_Delaunay_remeshing 
with capital D
 2021-12-20 11:46:58 +01:00
Sébastien Loriot f26de8e819 use the container in STL_extension and not the internal one 2021-11-30 13:20:15 +01:00
Jane Tournois 205497d0e2 apply missing translation (tx, ty, tz) 2021-11-18 15:42:29 +01:00
Jane Tournois 1113db560f fix indentation 2021-11-16 17:41:51 +01:00
Jane Tournois 355d11f98e start refactoring 2021-11-16 17:14:15 +01:00
Jane Tournois ddc7aa343d add missing license 2021-11-16 14:37:03 +01:00
Jane Tournois 0936df8b63 add detection of triple lines from labeled images 
for tet meshing with features
 2021-11-16 11:53:45 +01:00
Jane Tournois e6bacfb226 make polyhedral complex usable with Surface_mesh 2021-11-12 10:44:41 +01:00
Sébastien Loriot ab48f63e30 update latest cmake version tested 2021-11-09 10:58:47 +01:00
Sébastien Loriot 262a04cef2 remove useless POLICY setting 2021-11-09 10:19:14 +01:00
Sébastien Loriot 58181afcdb remove useless include directives 2021-11-09 10:16:12 +01:00
Jane Tournois c9b70e46a3 doc 2021-11-02 14:40:35 +01:00
Jane Tournois cc53fadab1 avoid copy 2021-11-02 14:37:44 +01:00
Jane Tournois 32ac340b6e fix link 2021-11-02 13:49:24 +01:00
Jane Tournois 61507f33c9 doc 2021-11-02 11:32:11 +01:00
Jane Tournois fa06d5f8c5 use get_parameter_reference and remove nasty include 2021-11-02 11:31:13 +01:00
Jane Tournois bbee8a9063 use is_default_parameter 2021-11-02 11:27:14 +01:00
Jane Tournois 79c4d4f1c8 mael's review 2021-11-02 11:23:50 +01:00
Jane Tournois 18529dded2 ref added 2021-11-02 09:40:20 +01:00
Sébastien Loriot ac77ee3140 fix doc build 2021-11-01 16:17:11 +01:00
Jane Tournois 909e69888c
Merge branch 'master' into PMP-add_surface_mesher-jtournois 2021-10-29 17:47:25 +02:00
Sébastien Loriot 9543deb304 Merge pull request #6046 from MaelRL/PM-Fix_pmaps_reference_types_master-GF 
Various fixes for property maps (master)
 2021-10-29 17:40:15 +02:00
Sébastien Loriot 3cf45cb83b update image path 2021-10-29 17:24:44 +02:00
Jane Tournois 1569978d3c add polyline_constraints as input for delaunay_remeshing 
and add a test using it
 2021-10-29 17:20:07 +02:00
Laurent Rineau ca89949169 Merge pull request #5597 from lrineau/Mesh_3-weighted_images-GF 
Mesh_3: Add weighted images
 2021-10-29 17:01:33 +02:00
Laurent Rineau 7b9113ac0c Merge pull request #6034 from sloriot/CGAL_data-moving_files 
CGAL Data: doc + more data moves
 2021-10-29 17:00:07 +02:00
Laurent Rineau bb7253638e Merge pull request #6040 from lrineau/Mesh_3-remove_const_in_Set_of_indices-lrineau 
CGAL/Mesh_3/experimental/AABB_filtered_projection_traits.h: Remove  boost::remove_const<..> from the index type
 2021-10-29 16:59:59 +02:00
Laurent Rineau aca24f489b Merge pull request #6054 from janetournois/Mesh_3-uninitialized_warnings-GF 
Mesh_3 - fix maybe uninitialized warning
 2021-10-29 16:59:45 +02:00
Jane Tournois 90b5c60956 rename make_surface_mesh() to delaunay_remeshing() 2021-10-29 14:52:14 +02:00
Jane Tournois 70ad367964 add CMake warning when ITK is not found 2021-10-29 12:27:04 +02:00
Jane Tournois 0498cace68 add and use CGAL_ITK_support.cmake 2021-10-29 12:27:04 +02:00
Jane Tournois b664ee54c3 workaround deprecation warning of versions < 5 of ITK 2021-10-29 12:27:04 +02:00
Jane Tournois b221437366 doc 2021-10-27 22:58:02 +02:00
Jane Tournois 5ec19abc7b domain.detect_features() and domain.add_features() cannot be called in sequence 
so we separate the use of edge_is_constrained_map and automatic detection of features
 2021-10-27 22:53:48 +02:00
Jane Tournois c113247f83 add missing typename 2021-10-27 13:18:21 +02:00
Jane Tournois e8ac9f281c add feature detection 2021-10-27 12:24:24 +02:00
Jane Tournois 1a3ce53464 user manual 2021-10-26 15:20:20 +02:00
Jane Tournois a9318b3832 fix maybe uninitialized warning 2021-10-15 09:48:54 +02:00
Sébastien Loriot fab7c364fd function is in the IO namespace 2021-10-13 17:49:50 +02:00
Mael Rouxel-Labbé 131242bb80 Merge branch 'PM-Fix_pmaps_reference_types-GF' into PM-Fix_pmaps_reference_types_5.3-GF 2021-10-12 09:29:23 +02:00
Mael Rouxel-Labbé 8166579e55 Merge branch 'PM-Fix_pmaps_reference_types-GF' into PM-Fix_pmaps_reference_types_master-GF 2021-10-11 19:58:07 +02:00
Jane Tournois c8918a9b0d fix conversion warning 2021-10-11 13:19:40 +02:00
Jane Tournois 9041574b9e remove free function remove_isolated_vertices_in_mesh_3 
a member function of C3T3 is enough
 2021-10-11 12:24:10 +02:00
Laurent Rineau 1af4f9336b Remove boost::remove_const<..> for the index type 
It does not seem to be necessary. Actually, I really do not see why it
could have been necessary in the past.
 2021-10-08 16:24:51 +02:00
Mael Rouxel-Labbé 590ddf8015 Various fixes for pmaps: 
- Use `value_type` when the returned type is not a reference
- Enforce `reference = value_type` if the returned type is not
  a reference (to avoid `typename PM::reference r = get(m, k)`,
  which will take a ref to a temporary if the `reference`
  typedef is an actualy reference)
- Do not use `put_get_helper` if the property map is not a `lvalue`
  **mutable** property map: the `put()` is `map[k] = v`, which
  is broken if `operator[]` does not return a reference
- The concept `boost::lvalue_property_map_tag` requires `operator[](key)`,
  not a reference in `get(map, key)`. You can have a readable property map
  returning a reference through its `get(map, key)`, but if there is
  no `operator[]`, it's just a `boost::readable_property_map_tag`
- Some const correctness to avoid copying maps with state
  or heavy keys in `get(map, key)` / `put(map, key, value)`
- Base the category of a wrapping pmap on what it offers instead
  of just forwarding the base property map's category
- Tried to do something like mutable lvalue pmap:
  * `value_type& operator[](key&)`
  * `ref get(map, const key&)`
  * `put(map, const key&, const value_type&)`
  and non-mutable lvalue pmap:
  * `const value_type& operator[](const key&)`
  * `ref get(map, const key&)`
  but not everything fits properly...
 2021-10-08 15:38:47 +02:00
Mael Rouxel-Labbé df560987a6 Whitespace & cleaning changes 2021-10-08 12:13:43 +02:00
Sébastien Loriot 44df66485d move images 2021-10-07 14:47:15 +02:00
Sébastien Loriot 1857a25d28 Merge remote-tracking branch 'cgal/master' into CGAL_data-moving_files 2021-10-06 13:50:31 +02:00
Laurent Rineau a5e3469e78 Merge pull request #6011 from janetournois/Mesh_3-prevent_bad_initialization-jtournois 
Mesh_3 - warning message after bad initialization
 2021-10-06 12:04:54 +02:00
Jane Tournois ac7b637247 make types consistent with non-weighted label images 2021-10-05 10:27:03 +02:00
Jane Tournois f5eeffbbf6 remove unnecessary inheritance 2021-10-04 16:41:40 +02:00
Jane Tournois 5b2e4d1501 replace std::unary_function, that is deprecated in C++11 2021-10-04 16:09:50 +02:00
Jane Tournois 509ecfa7d2 smoothing/smoother 2021-10-04 15:44:17 +02:00
Jane Tournois a6d486f11a add missing cast 2021-10-04 15:23:44 +02:00
Jane Tournois 8a6d92fff8 use "image of weights" in doc 2021-10-04 12:12:02 +02:00
Jane Tournois dd493fdc9a loop on i because label is not used 2021-10-04 12:11:45 +02:00
Sébastien Loriot 8350dea94a char* -> std::string 2021-10-04 09:49:24 +02:00
Sébastien Loriot e805052e9e manual fixes 2021-10-04 09:43:55 +02:00
Sébastien Loriot 47028cd184 automatically move data files in data dir + update paths 
Done for OFF/OBJ/STL/XYZ/PWN/PLY
 2021-10-04 09:42:49 +02:00
Jane Tournois cf4edabb9e user manual 2021-10-04 09:12:56 +02:00
Jane Tournois 7dc8723d54 fix default in doc 2021-10-01 14:47:46 +02:00
Jane Tournois 6e9252d196 doc 2021-10-01 14:25:14 +02:00
Jane Tournois aa3505084d add facet_topology 2021-10-01 10:59:15 +02:00
Jane Tournois 7e673974cc add facet_distance 2021-10-01 10:30:08 +02:00
Jane Tournois dfe501d70a add facet_angle 2021-10-01 10:22:15 +02:00
Jane Tournois 8837473736 add facet_size 2021-10-01 09:41:06 +02:00
Jane Tournois 9bbd1b179a add edge sizing field management 2021-10-01 09:23:25 +02:00
Jane Tournois b26edb5a86 minor reorganization 2021-09-30 15:36:03 +02:00
Jane Tournois dd0b8aaa12 doc 2021-09-30 15:03:46 +02:00
Jane Tournois 4e5ca9d9ac remove unused named parameter 2021-09-30 14:53:39 +02:00
Jane Tournois ad066f656e fix license include 2021-09-30 14:50:00 +02:00
Sébastien Loriot 6dd313d233 move header to Mesh_3 2021-09-30 14:40:44 +02:00
Jane Tournois 932639eb6f move warning code to have it happen when c3t3 has already been scanned 2021-09-30 11:24:21 +02:00
Jane Tournois c7a6adb21f move header doc as deprecation recommends 2021-09-28 11:10:01 +02:00
Jane Tournois 591141b600 use v->meshing_info() for performances 
it avoids creating two std::set of vertices, and the use of
std::set_difference
 2021-09-27 14:57:10 +02:00
Jane Tournois db5e638ac2 un-document remove_far_points_in_mesh_3 and merge with remove_isolated_vertices_in_mesh_3 2021-09-27 11:47:43 +02:00
Jane Tournois dc0dad1577 remove wrong recommendation 2021-09-27 11:02:42 +02:00
Jane Tournois 8864d3fb7e fix iterator type 2021-09-24 17:50:57 +02:00
Jane Tournois 0f4c64b7f4 fix iterator type 2021-09-24 17:34:27 +02:00
Jane Tournois 7545d2e302 document remove_isolated_vertices_in_mesh_3() 2021-09-24 17:15:36 +02:00
Jane Tournois 2c40d3f639 Merge branch 'Mesh_3-document_remove_far_points-GF' into Mesh_3-isolated_vertices-jtournois 2021-09-24 17:06:45 +02:00
Jane Tournois 4e8f424f25 test new remove functions 2021-09-24 17:04:39 +02:00
Jane Tournois 66f62dec9e add new function to remove isolated vertices 
i.e. vertices that are part of the triangulation but do not
belong to a cell of the complex
 2021-09-24 17:04:15 +02:00
Jane Tournois b58c67d712 use macros 2021-09-24 14:41:10 +02:00
Jane Tournois 6d42c1ddf2 add warning message for the case when initialization has failed 2021-09-24 11:14:29 +02:00
Sébastien Loriot 71932f2f1e manual fixes 2021-09-23 18:56:29 +02:00
Sébastien Loriot 7de9564e1c remove archive directories that are of not use (available in git history) 2021-09-23 18:55:54 +02:00
Sébastien Loriot e58836baf0 move off files from archive to meshes 2021-09-23 18:54:58 +02:00
Sébastien Loriot bd345c7f83 remove .cmd files for examples 2021-09-23 18:54:46 +02:00
Jane Tournois 4b3fee813f ITK is not needed in c3t3_item, and find with the required components only 2021-09-23 14:46:40 +02:00
Jane Tournois 9c02c24cd2 add missing cmake module requirement 2021-09-23 11:29:02 +02:00
Jane Tournois 95a4613435 Merge branch 'Mesh_3-weighted_images-GF' of github.com:lrineau/cgal into Mesh_3-weighted_images-GF 2021-09-23 10:23:31 +01:00
Jane Tournois 8a882ad33a Cmake : use only the required modules of ITK 2021-09-23 11:22:59 +02:00
Jane Tournois bddb4fcdc6 remove debug code 
Co-authored-by: Laurent Rineau <Laurent.Rineau@cgal.org>
 2021-09-23 10:54:31 +02:00
Jane Tournois 17215709a7 create CGAL::Image_3 for weights before counting non-white pixels 
and avoid implicit conversion to CGAL::Image_3 in the call
to count_non_white_pixels, which was then calling the destructor of
CGAL::Image_3, deleting `weights` at the same time
 2021-09-23 10:46:28 +02:00
Jane Tournois 0bc25f9f20 doc (add dependency and new link) 2021-09-21 21:44:40 +02:00
Jane Tournois 8bfb4e4464 avoid all triple for loops on i,j,k 2021-09-21 19:45:51 +02:00
Jane Tournois e516b194b9 use Parallel_if_available_tag 2021-09-20 12:00:25 +02:00
Jane Tournois 666a54097d documents weights size 2021-09-20 12:00:11 +02:00
Jane Tournois bad72db82d document CGAL::remove_far_points_in_mesh_3() 2021-09-17 16:03:06 +02:00
Sébastien Loriot 5945e48a3e restore sub-directories accidently removed in 98e471849b 2021-09-17 08:14:06 +02:00
Sébastien Loriot a93dda81cd Merge pull request #5935 from janetournois/CGAL-fix_warnings_c++20-jtournois 
Fix warnings for C++20
 2021-09-10 17:43:47 +02:00
Sebastien Loriot 575939c64f
Merge pull request #5952 from sloriot/SS-remove_Polygon_dep 
remove artificial dependency to Polygon
 2021-09-10 17:40:20 +02:00
Sebastien Loriot 4610cf3c66
Merge pull request #5904 from sloriot/CGAL-remove_config_flags 
Replace macros with inline functions and remove a config flag
 2021-09-10 17:38:50 +02:00
Mael Rouxel-Labbé 8a92d51601 Merge branch 'Distance_3-Add_Tri_Tri-GF-old' into Distance_3-Add_Tri_Tri-GF 2021-09-02 17:26:44 +02:00
Sébastien Loriot f5d2fb28a2 remove artificial dependency to Polygon 2021-09-01 16:41:36 +02:00
Maxime Gimeno 499301c759 More fixes 2021-08-31 16:00:37 +02:00
Jane Tournois 2a4090b3a9 rename header in doc 2021-08-31 15:25:09 +02:00
Jane Tournois e1d4c0df80 rename generate_weights() to generate_label_weights() 2021-08-31 14:58:21 +02:00
Maxime Gimeno 91ca5a8add Runs of Mesh_2 and Mesh_3 tests 2021-08-31 11:16:39 +02:00
Sébastien Loriot 288c283784 TBB_IMPLEMENT_CPP0X is always 0 when using c++14 2021-08-30 19:24:59 +02:00
Sébastien Loriot 2c889a3b52 remove unused files 2021-08-26 11:43:58 +02:00
Sébastien Loriot 98e471849b moving files from internal to PKG/internal 2021-08-26 11:33:39 +02:00
Sébastien Loriot 1a65f4ca0a Merge remote-tracking branch 'cgal/5.3.x-branch' 2021-08-25 19:33:46 +02:00
Sébastien Loriot 3d77cbd804 Merge remote-tracking branch 'cgal/5.2.x-branch' into HEAD 2021-08-25 19:33:29 +02:00
Jane Tournois 5439dbd07e fix mismatch between two definitions of Mesher_level_conflict_status 
that were in different namespaces (CGAL and CGAL::Mesh_3)
 2021-08-25 19:32:13 +02:00
Jane Tournois ee8531d600 boost/iterator.hpp is deprecated 2021-08-25 15:25:40 +02:00
Jane Tournois f07b47e1e2 fix mismatch between two definitions of Mesher_level_conflict_status 
that were in different namespaces (CGAL and CGAL::Mesh_3)
 2021-08-24 18:04:50 +02:00
albert-github 72e2c7b27b Warnings Mesh_3 regarding non existing file (documentation) 
Currently we get a number of warnings when building the documentation for Mesh_3:
```
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:743: warning: unable to resolve reference to 'CGAL/Mesh_3/initialize_triangulation_from_labeled_image.h\' for \ref command
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:801: warning: unable to resolve reference to 'Mesh_3/random_labeled_image.h\' for \ref command
/home/cgal-testsuite/cgal_doc_build/CGAL-5.3.1-I-169/doc/Mesh_3/Mesh_3.txt:817: warning: unable to resolve reference to 'CGAL/Mesh_3/initialize_triangulation_from_gray_image.h\' for \ref command
```
Note the backslash at the end of the file name.

Most likely an attempt was made to escape the dot to not have it as part of the filename, though at least in doxygen 1.8.13 a closing dot was not seen as part of the filename.
Looking at the other escape character of doxygen: the commercial at sign, this was apparently working as escape in the filename as well, though in doxygen 1.8.15 this was not the case anymore either.
During one of the last changes also the backslash lost this possibility for this case and this is now consistent.

The current change (removing the backslashes) doesn't look like to alter the behavior for the 1.8.13 and master version in respect to CGAL.
 2021-08-15 20:32:45 +02:00
Jane Tournois 77152be776 uncomment the use of weights in example 2021-07-29 15:22:05 +02:00
Jane Tournois 868e1583e0 improve figure caption 2021-07-29 12:02:56 +02:00
Jane Tournois 4b84c4b1f3 move dump to debug code 2021-07-29 12:02:40 +02:00
Jane Tournois f9f288903c Merge branch 'Mesh_3-weighted_images-GF' of github.com:lrineau/cgal into Mesh_3-weighted_images-GF 2021-07-29 11:41:20 +02:00
Jane Tournois b4932e3188 add weighted images figure 2021-07-29 11:41:07 +02:00
Jane Tournois 438422eb6d fix outdated code 
Co-authored-by: Laurent Rineau <Laurent.Rineau@cgal.org>
 2021-07-29 11:29:32 +02:00
Jane Tournois d1de29d7f1 improve debug code 2021-07-29 10:46:00 +02:00
Jane Tournois c133042598 refine less the surface 2021-07-29 10:43:56 +02:00
Jane Tournois b2d762256f add missing id increment 2021-07-29 10:43:43 +02:00
Jane Tournois 720d1a7ca8 fix types and do not skip label 0 2021-07-28 17:35:25 +02:00
Jane Tournois 2637bf6343 add weighted images to the demo 2021-07-27 09:33:49 +02:00
Jane Tournois c5a6838a03 add missing typename 2021-07-26 15:14:18 +02:00
Jane Tournois fc9aed70e9 doc 2021-07-26 14:27:55 +02:00
Jane Tournois 85c2c20a0d doc tiny fixes 2021-07-26 12:57:57 +02:00
Jane Tournois a2a92614d3 do not compile weighted images example if ITK not found 2021-07-26 12:46:13 +02:00
Jane Tournois 255ded5550 do not compile weighted images example if ITK not found 2021-07-26 12:17:09 +02:00
Jane Tournois 5edf9d4361 improve example for doc 2021-07-26 11:20:03 +02:00
Maxime Gimeno a3d1765ab4 Merge remote-tracking branch 'cgal/master' into CGAL-Clean_up_boost_versions-maxGimeno 2021-07-19 14:18:40 +02:00
Sebastien Loriot 40f507a1f1
Merge pull request #5800 from MaelRL/SS-Doc_fixes-GF 
Harmonization of some IO stream documentation
 2021-07-19 07:56:48 +02:00
Laurent Rineau 5896af7960 Fix indentation 2021-07-13 11:49:51 +02:00
Laurent Rineau f8a2878b0c Port Mesh_3 to oneAPI-TBB 
The work was already mostly done in PR #4892, but there was still two
issues:
  - `tbb::parallel_do` has been removed, and `tbb::parall_for_each`
  was to be used instead,
  - the support for `tbb_hasher` has been removed.

This time, I have tested in a container were
intel-oneapi-tbb-common-devel-2021.3.0-2021.3.0-511.noarch was
installed, but not tbb version 2020.
 2021-07-13 11:38:43 +02:00
Jane Tournois ba95896f93 add doc for weighted images 2021-07-06 15:56:55 +02:00
Jane Tournois d069c07b04 remove Image_word_type template parameter 2021-07-05 14:38:46 +02:00
Jane Tournois 89e9269c0d use using instead of typedef and remove unused typedefs 2021-07-05 13:52:44 +02:00
Jane Tournois 89a227af80 make 'weights' a boost named parameter of create_labeled_image_mesh_domain() 2021-06-25 17:09:32 +02:00
Jane Tournois 445378f1c5 remove writeImage from example 2021-06-24 15:43:35 +02:00
Jane Tournois ee6f2f8df5 wrap debug code in macro CGAL_MESH_3_WEIGHTED_IMAGES_DEBUG 2021-06-24 15:04:09 +02:00
Jane Tournois 5828996f2e the Weights_type is unsigned char, not Image_word_type 2021-06-24 14:50:10 +02:00
Mael Rouxel-Labbé 78ff9185b3 Harmonize ASCII usage across all packages 2021-06-23 23:34:32 +02:00
Mael Rouxel-Labbé 084a1efe2d Merge remote-tracking branch 'cgal/master' into Distance_3-Add_Tri_Tri-GF 2021-06-23 22:30:03 +02:00
Jane Tournois 3b23b5650d generate_weights is now working 2021-06-21 09:59:25 +02:00
Laurent Rineau 6a9061668c Merge pull request #5756 from albert-github/feature/bug_redirects 
Correction of hyperlinks
 2021-06-16 15:06:08 +02:00
Laurent Rineau 20dcc7b57e Merge pull request #5762 from janetournois/Mesh_3-fix_warning_pr5587-jtournois 
Mesh_3 - fix missing initializer warning
 2021-06-16 15:04:57 +02:00
Laurent Rineau d74d4745df Merge pull request #5762 from janetournois/Mesh_3-fix_warning_pr5587-jtournois 
Mesh_3 - fix missing initializer warning
 2021-06-16 15:03:45 +02:00
Jane Tournois c07c71275d duplicate image before application of filters 2021-06-15 16:01:21 +02:00
Jane Tournois 16db150f65 fix allocation of image 
then :
- smooth each indicator function with Gaussian filter
- compute the maximum image of all indicator functions
 2021-06-15 14:37:24 +02:00
Jane Tournois 293b28d7f1 perform gaussian smoothing 2021-06-14 17:28:53 +02:00
Jane Tournois b47cf8e0d9 compute indicator images and fit them to [0; 255] 2021-06-14 17:24:50 +02:00
Jane Tournois d831724b10 convert a CGAL::Image_3 to ITK format to generate weights for weighted images 
- add ITK as a dependency for mesh_3D_weighted_image.cpp
- WIP
 2021-06-14 16:49:43 +02:00
Jane Tournois b69f643239 add missing param in initializer list 2021-06-04 15:58:26 +02:00
albert-github 2a54687e77 Correction of hyperlinks 
The link checker gave a number of redirects and incorrect links.
- the redirects have been solved ass far as possible
- the incorrect links have been checked and corrected where possible, others  have been reported through issues;
 2021-06-04 13:52:14 +02:00
Maxime Gimeno ab182dd46a Merge remote-tracking branch 'cgal/master' into CGAL-Clang_tidy_new_pass-maxGimeno 2021-05-21 14:04:07 +02:00
Maxime Gimeno 413b711ee2 Example pass 2021-05-20 15:07:40 +02:00
Laurent Rineau 59a0da4f13 Merge pull request #5692 from maxGimeno/CGAL_cpp11_atomic_and_threads-maxGimeno 
CGAL:: Use std atomic and threads

# Conflicts:
#	Arrangement_on_surface_2/include/CGAL/Arr_counting_traits_2.h
 2021-05-19 17:23:53 +02:00
Laurent Rineau 82bec8a1d6 Merge pull request #5692 from maxGimeno/CGAL_cpp11_atomic_and_threads-maxGimeno 
CGAL:: Use std atomic and threads

# Conflicts:
#	Arrangement_on_surface_2/include/CGAL/Arr_counting_traits_2.h
 2021-05-19 17:11:37 +02:00
Laurent Rineau 26ad68e486 Merge pull request #5649 from sloriot/CGAL-no_boost_shared_ptr 
Replace internal use of boost shared_ptr
 2021-05-18 18:14:12 +02:00
Maxime Gimeno 17ac255108 Fix calls t cpp11:atomic stuff 2021-05-18 15:43:59 +02:00
Maxime Gimeno 393ae7dae6 Clean-up boost_version reqs 2021-05-12 15:03:53 +02:00
Maxime Gimeno f6cefea66a Add required constructors to Mesh_vertex_base_3<Parallel_tag> 2021-05-11 09:21:58 +02:00
Maxime Gimeno 1b5b61ab0a Add include 2021-05-07 12:17:32 +02:00
Maxime Gimeno 9872ac9cf8 Replace tbb::atomic 2021-05-07 11:16:50 +02:00
Maxime Gimeno 3e03d50b8a replace usages of CGAL::cpp11::atomic and thread by std:: calls 2021-05-07 11:10:30 +02:00
Maxime Gimeno e9b7595fff Deprecate CGAL headers for threads, atomic and result_of, and move their content to config.h as fallback 2021-05-07 11:09:24 +02:00
Sébastien Loriot 4e519a3c7a move documented IO functions in IO namespace 2021-05-05 13:15:37 +02:00
Sébastien Loriot 12f0e412b5 write_vtu -> write_VTU 2021-05-04 15:12:36 +02:00
Sébastien Loriot 22be8671f7 move read_vtk_image_data to IO 2021-05-04 14:59:28 +02:00
Sébastien Loriot fb6f703b55 IO namespace for files in IO directories 2021-05-04 14:36:06 +02:00
Sébastien Loriot 70058db9b7 add IO namespace for Mesh_3 package 2021-05-03 15:39:07 +02:00
Sébastien Loriot 1faa0e2992 replace internal use of boost::shared_ptr by std::shared_ptr 2021-04-28 10:55:26 +02:00
Sébastien Loriot 39367c2313 Merge remote-tracking branch 'cgal/5.2.x-branch' 2021-04-17 11:14:29 +02:00
Sébastien Loriot cbd95907cd Merge remote-tracking branch 'cgal/5.1.x-branch' into HEAD 2021-04-17 11:11:28 +02:00
Sebastien Loriot cec1f67cdd
Merge pull request #5580 from janetournois/Mesh_3-feature_protection_fixes-GF 
Mesh_3 - fix feature protection for images
 2021-04-17 11:05:33 +02:00
Sebastien Loriot 925ff14ad9
Merge pull request #5587 from janetournois/Mesh_3-fix_polylines_on_cube_detection-jtournois 
Mesh_3 - fix features detection on image bounding box
 2021-04-17 11:02:16 +02:00
Sebastien Loriot b7323389c7
Merge pull request #5622 from maxGimeno/CMake-Update_versions_in_scripts-maxGimeno 
Update maximum cmake versions
 2021-04-17 10:58:14 +02:00
Sebastien Loriot 0c6404d1bc
Merge pull request #5596 from sloriot/Doc-precompiled_demos 
Add doc for precompiled demos
 2021-04-17 10:57:02 +02:00
Sebastien Loriot e3020f1c64
Merge pull request #5526 from janetournois/Mesh_3-add_determinism_test-jtournois 
Mesh_3 - more testing of determinism
 2021-04-17 10:52:30 +02:00
Maxime Gimeno c49152359c update max version of cmake and announce the new minimal in CHANGE.md 2021-04-15 15:08:54 +02:00
Laurent Rineau a9c2e07584 Fix the runtime error without arguments 2021-04-13 11:03:19 +02:00
Laurent Rineau 76d2fcd1e1 Missing header 2021-04-13 11:03:00 +02:00
Mael Rouxel-Labbé fba303341f Merge remote-tracking branch 'cgal/master' into Distance_3-Add_Tri_Tri-GF 2021-04-12 15:33:14 +02:00
Mael Rouxel-Labbé 5deb509374 Move to Distance_3/X_Y.h rather than squared_distance_X_Y.h (as Intersections) 2021-04-12 14:42:44 +02:00
Sébastien Loriot 350b9172c5 replace %CGAL by \cgal (but in titles) 2021-04-11 14:52:01 +02:00
Laurent Rineau 71b85f4b85 Fix license 2021-04-08 18:44:19 +02:00
Laurent Rineau a5aaab66cf Add weighted images 
The API is not final.
 2021-04-08 18:29:04 +02:00
Jane Tournois 0f4559a5e2 add missing default value 
attempt to fix "maybe uninitialized" warning
 2021-04-06 17:39:54 +02:00
Jane Tournois 7574751d4f not all points on the edges of the cube are corners 
differentiate between corner vertices and edge vertices
corner vertices are forced to be "terminal" in the call
to split_graph_into_polylines() hence leading to
as many polylines as segments on image bbox edges
 2021-04-06 14:59:49 +01:00
Laurent Rineau 1b54449dc5 Merge pull request #4878 from danston/Kernels-decltypes-danston 
Improve decltype/result_of/invoke_result
 2021-04-06 15:13:21 +02:00
Laurent Rineau 53491eca02 Merge pull request #5550 from maxGimeno/Eigen_fixes_in_cmakelists-5-2-maxGimeno 
Fix Eigen in CMakeLists 5.2
 2021-04-06 15:12:58 +02:00
Jane Tournois 1b323b8599 when aabb_tree is empty, there are no patches 
hence no incident patches
we only refer to an aabb tree of curves
 2021-04-02 14:44:26 +02:00
Laurent Rineau 0cb823656a Merge pull request #5463 from janetournois/Mesh_3-example_initialization_cc_in_gray_images-jtournois 
Mesh 3 - connected components initialization for 3D gray images
 2021-03-24 15:05:29 +01:00
Maxime Gimeno 5aa763e055 Don't indent and use return() 2021-03-23 14:57:15 +01:00
Maxime Gimeno acd886b11b Don't indent, use return() 2021-03-23 14:55:55 +01:00
Maxime Gimeno 12cf238ca2 Don't REQUIRE Eigen 2021-03-23 13:49:55 +01:00
Maxime Gimeno 9f1e0cb8d6 Fix Eigen in cmakelists 2021-03-23 13:05:52 +01:00
Maxime Gimeno aff0380871 Fix Eigen in cmakelists 2021-03-23 12:59:47 +01:00
Mael Rouxel-Labbé 27069d423c Update header includes 2021-03-12 12:52:05 +01:00
Dmitry Anisimov 00c185b028
Merge branch 'master' into Kernels-decltypes-danston 2021-03-12 12:06:20 +01:00
Jane Tournois c29b7e2eaf test facets_in_complex_3_to_triangle_mesh() determinism 2021-03-11 15:36:52 +01:00
Jane Tournois 04e7d8281d link with TBB 2021-03-04 12:08:45 +01:00
Laurent Rineau b1d78a909f Merge pull request #5433 from sloriot/CGAL-last_bind 
Remove last bind
 2021-03-03 17:32:59 +01:00
Laurent Rineau 38b45f79b1 Merge pull request #5468 from sloriot/CGAL-tiny_fixes 
Mesh_3: various small bug-fixes
 2021-03-03 17:29:37 +01:00
Laurent Rineau 44d36e534f Merge pull request #5474 from danston/TBB-execution_failures-danston 
Triangulation_3 and Mesh_3 Timeouts for parallel tests fix
 2021-03-03 17:22:18 +01:00
Laurent Rineau 6f8f36462f Merge pull request #5433 from sloriot/CGAL-last_bind 
Remove last bind
 2021-03-03 17:10:13 +01:00
Laurent Rineau d4c331cd37 Merge pull request #5468 from sloriot/CGAL-tiny_fixes 
Mesh_3: various small bug-fixes
 2021-03-03 16:39:52 +01:00
Laurent Rineau e8a1e05202 Merge pull request #5474 from danston/TBB-execution_failures-danston 
Triangulation_3 and Mesh_3 Timeouts for parallel tests fix
 2021-03-03 16:39:31 +01:00
Laurent Rineau 14a3938747 Merge pull request #5468 from sloriot/CGAL-tiny_fixes 
Mesh_3: various small bug-fixes
 2021-03-03 16:31:13 +01:00
Dmitry Anisimov 5ca5472ba4 better style 2021-02-22 11:12:43 +01:00
Dmitry Anisimov 9689ad23c2 added RUN_SERIAL option to the parallel tests in Triangulation_3 and Mesh_3 2021-02-22 11:08:06 +01:00
Jane Tournois cc589cdc7f
fix example name 
Co-authored-by: Laurent Rineau <Laurent.Rineau@cgal.org>
 2021-02-19 10:18:19 +01:00
Laurent Rineau fa7393cb15 Merge pull request #5389 from sloriot/Mesh_3-fix_patch_id_map 
Clean and fix default facet patch id map
 2021-02-18 15:19:15 +01:00
Sébastien Loriot 98e48385e8 a RIGHT angle is also a corner 2021-02-17 15:49:48 +01:00
Sébastien Loriot 3b9dafb23b fix after BOOST_FOREACH -> for replacement 2021-02-17 15:49:30 +01:00
Jane Tournois 032ad19677 add custom initialization of gray image to user manual 
and re-organize to have both custom initializations (gray level and
segmented) together
 2021-02-15 16:27:40 +01:00
Jane Tournois 7c9e45206d add image_values_to_subdomain_indices parameter 2021-02-12 17:20:46 +01:00
Jane Tournois 4902b42f54 add example to mesh gray image with custom initialization 2021-02-12 16:56:33 +01:00
Jane Tournois 8e492aa4f6 add initialization by detection of connected components in gray level image 2021-02-12 16:53:45 +01:00
Sébastien Loriot 4bb0406240 do not include boost/bind.hpp (shouldn't be used anymore) + fix remaining bind 
(nasty using namespace boost!)
 2021-02-12 15:35:19 +01:00
Jane Tournois c13a7a855c take into account the translation tx, ty, tz in Get_point from an image 2021-02-12 15:25:24 +01:00
Laurent Rineau d7bc38f683 Take the translation TX/TY/TZ into account 2021-02-12 14:16:54 +01:00
Laurent Rineau e94c41714a Fix a compilation error 
The definition of `initialize_triangulation_from_gray_image`
required `initialize_triangulation_from_labeled_image` to be defined,
or at least declared.
 2021-02-12 14:15:56 +01:00
Jane Tournois 5e86781ad8 add code to detect connected components in gray-level images 2021-02-12 10:29:14 +01:00
Sébastien Loriot 5835698fe2 no ref on temporary 2021-02-10 15:42:29 +01:00
Dmitry Anisimov 81d9556707 Merge remote-tracking branch 'upstream/master' into Kernels-decltypes-danston 2021-02-10 10:06:45 +01:00
Laurent Rineau a735e849c0 Merge pull request #5152 from sloriot/CGAL-remove_bind 
Replace usages of boost::bind
 2021-02-05 16:14:04 +01:00
Laurent Rineau 4c947f0ee0 Merge pull request #5340 from danston/CGAL-clang_warnings_fix-danston 
Clang warnings fixed
 2021-02-05 16:10:37 +01:00
Laurent Rineau 1453294c74 Merge pull request #5376 from lrineau/Mesh_3-fix_mesh_implicit_domains.cpp-GF 
Fix examples/Mesh_3/mesh_implicit_domains.cpp
 2021-02-05 16:10:24 +01:00
Laurent Rineau 7e2ee4946d Merge pull request #5152 from sloriot/CGAL-remove_bind 
Replace usages of boost::bind
 2021-02-05 16:07:34 +01:00
Laurent Rineau 3d71b8e5f0 Merge pull request #5376 from lrineau/Mesh_3-fix_mesh_implicit_domains.cpp-GF 
Fix examples/Mesh_3/mesh_implicit_domains.cpp
 2021-02-05 16:07:22 +01:00
Sébastien Loriot f69be333f0 Merge remote-tracking branch 'cgal/5.2.x-branch' into CGAL-remove_bind 2021-01-29 18:44:50 +01:00
Sébastien Loriot bf128b3fda rename typedef to make clear it is a property map 2021-01-25 16:19:23 +01:00
Sébastien Loriot fd371ef96b refactor the facet patch id maps + update the default 2021-01-25 16:09:17 +01:00
Laurent Rineau f176529041 Merge pull request #5357 from sloriot/CGAL-boost_function_output-master 
Include non-deprecated header (master)
 2021-01-21 16:22:39 +01:00
Laurent Rineau 52bb68c012 Merge pull request #5356 from sloriot/CGAL-boost_function_output-5.2 
Include non-deprecated header (5.2)
 2021-01-21 16:18:55 +01:00
Laurent Rineau dce5ed14b7 Merge pull request #5355 from sloriot/CGAL-boost_function_output-5.1 
Include non-deprecated header (5.1)
 2021-01-21 16:09:39 +01:00
Laurent Rineau 6fe18d8068 Enhance the debugging tools in Mesh_3 2021-01-20 15:38:05 +01:00
Laurent Rineau ac875956a1 Fix examples/Mesh_3/mesh_implicit_domains.cpp 
The error was actually due to an mismatch between `CGAL_LINKED_WITH_TBB`
and `CGAL_CONCURRENT_MESH_3`.

For CGAL-5.3 we should clean that up! That code using `Parallel_tag`
without TBB should not compile, actually.

Fix for https://github.com/CGAL/cgal/issues/5375
 2021-01-20 15:38:05 +01:00
Sébastien Loriot bc161f2ae9 Merge 'CGAL-Eigen3_support-5.2' 2021-01-15 10:59:20 +01:00
Sébastien Loriot f4935dc199 Merge branch 'CGAL-Eigen3_support-5.1' 2021-01-15 10:54:02 +01:00
Sébastien Loriot eecb00534e fix macro name to be consistent with find_package 2021-01-15 10:43:34 +01:00
Sébastien Loriot ad911271a9 Merge commit '6594e7549bd70923990d86c31e2aa267a79bb629' into HEAD 2021-01-15 10:12:17 +01:00
Sébastien Loriot bdd4efe3b3 Merge commit 'efc0c525e8b' into HEAD 2021-01-15 10:06:56 +01:00
Sébastien Loriot efc0c525e8 include non-deprecated header 2021-01-15 10:02:00 +01:00
Dmitry Anisimov 269a47d773
Merge branch 'master' into CGAL-clang_warnings_fix-danston 2021-01-14 16:51:13 +01:00
Maxime Gimeno 5d2ad68148 Add new Dependences. ATTENTION BGL is propagated through the NPs in Stream_support 2021-01-08 15:58:46 +01:00
Dmitry Anisimov 086299c56e tetrahedral remeshing range loop analysis copy to ref and auto warnings fixed 2021-01-08 10:39:24 +01:00
Maxime Gimeno 3d1c41fd14 Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2021-01-07 15:05:28 +01:00
Sébastien Loriot 2eb9908699 replace bind in Mesh_3 packages 2021-01-06 12:59:12 +01:00
Sébastien Loriot 361ef0cbbf simplify 2020-12-22 17:13:11 +01:00
Sébastien Loriot d1e1846f5e iterators are multipass 2020-12-22 16:55:25 +01:00
Laurent Rineau 34cde36fd9 Merge pull request #5209 from janetournois/Mesh_3-debug_global_optimizers-jtournois 
Mesh_3 global optimizers - improve projection to surface
 2020-12-09 16:14:35 +01:00
Laurent Rineau 9dcc0ef7e8 Merge pull request #5222 from maxGimeno/Tet_remesh-Fix_tbb-maxGimeno 
Mesh_3: Fix std::atomic wrong function

# Conflicts:
#	Tetrahedral_remeshing/examples/Tetrahedral_remeshing/CMakeLists.txt
 2020-12-09 16:14:19 +01:00
Laurent Rineau 3fc0ba4435 Merge branch '5.1.x-branch' into 5.2.x-branch 
# Conflicts:
#	Tetrahedral_remeshing/examples/Tetrahedral_remeshing/CMakeLists.txt
 2020-12-09 15:35:47 +01:00
Laurent Rineau 37f85e7702 Merge pull request #5209 from janetournois/Mesh_3-debug_global_optimizers-jtournois 
Mesh_3 global optimizers - improve projection to surface
 2020-12-09 14:58:56 +01:00
Dmitry Anisimov 3127190bcf marc's review 2020-12-08 12:48:04 +01:00
Jane Tournois 2d73ef361e remove wrong assertions 
when v has dimension 3, its incident cells can be either all inside
or all outside the complex
 2020-12-04 17:18:04 +01:00
Jane Tournois 232cf10af8 remove unused code 2020-12-04 10:40:42 +01:00
Mael Rouxel-Labbé 35fa50213a Avoid copies in Mesh_triangulation_3's trivial functions 
These exist because of P3M3
 2020-12-03 12:25:37 +01:00
Maxime Gimeno 0ed99d0182 Add a test for old Mesh_cell_base_3 2020-11-30 12:54:59 +01:00
Maxime Gimeno 5ee03985bf Fix atomic wrong function 2020-11-30 11:37:16 +01:00
Jane Tournois 0ed6aca5a4 replace get_closest_point() by get_closest_triangle() 
to use this function with Periodic_3_mesh_3
 2020-11-27 13:04:06 +01:00
Jane Tournois 9666b3cb73 replace PCA of points by PCA of triangles 
to make projection more precise and avoid moving a point inside a
protecting ball
 2020-11-26 16:25:55 +01:00
Maxime Gimeno 3b70343590 Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-11-16 16:19:43 +01:00
Maxime Gimeno 1c00bf6847 Merge remote-tracking branch 'cgal/master' into Cmake_improvements-maxGimeno 2020-10-29 15:09:16 +01:00
Laurent Rineau 646db6ef74 Try to fix a warning on MSVC 
```
...\include\CGAL/Polyhedral_mesh_domain_with_features_3.h(264): warning C4267: 'argument': conversion from 'size_t' to '_Ty', possible loss of data
        with
        [
            _Ty=int
        ]
...\cmake\platforms\x64_Cygwin-Windows10_MSVC2017-Release-64bits\test\Mesh_3\test_meshing_polylines_only.cpp(80): note: see reference to function template instantiation 'void CGAL::Polyhedral_mesh_domain_with_features_3<K,CGAL::Polyhedron_3<Gt,CGAL::Mesh_3::Mesh_polyhedron_items<Patch_id>,CGAL::HalfedgeDS_default,std::allocator<_Ty>>,CGAL::Default,Patch_id,CGAL::Tag_true>::add_features<std::_Vector_iterator<std::_Vector_val<std::_Simple_types<std::vector<CGAL::Point_3<Kernel_>,std::allocator<CGAL::Point_3<Kernel_>>>>>>>(InputIterator,InputIterator)' being compiled
        with
        [
            Gt=K,
            Patch_id=int,
            _Ty=int,
            Kernel_=CGAL::Epick,
            InputIterator=std::_Vector_iterator<std::_Vector_val<std::_Simple_types<Polyline>>>
        ]
```
 2020-10-27 09:43:46 +01:00
Laurent Rineau 19fa64fdca Mesh_3: Fix Polyhedral_mesh_domain_with_features_3::add_features 
This patch, allows to mesh a polyhedron in a 3D demo, while
specifying a polylines item for the sharp features.
 2020-10-23 13:52:54 +02:00
Maxime Gimeno bebd60c12b Merge remote-tracking branch 'cgal/master' into Cmake_improvements-maxGimeno 2020-10-20 09:53:54 +02:00
Mael Rouxel-Labbé 444531b80e Fix broken `Kernel` links 2020-10-14 19:22:46 +02:00
Mael Rouxel-Labbé f55ef7dd50 Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-10-09 18:36:17 +02:00
Sebastien Loriot c54622e9b4
Merge pull request #4976 from janetournois/Tet_remeshing-speedup-GF 
Tetrahedral Remeshing - speedup
 2020-10-02 15:29:24 +02:00
Sebastien Loriot 9e4970faef
Merge pull request #4781 from lrineau/Mesh_3-ITT_support-GF 
Add ITT support in Mesh_3
 2020-10-02 15:20:04 +02:00
Sebastien Loriot 20ac7ff2da
Merge pull request #4792 from lrineau/Mesh_3-reduce_size_of_debuginfo-GF 
Reduce size of symbols (and debug infos)
 2020-10-02 15:17:44 +02:00
Sebastien Loriot b92ad36e82
Merge pull request #4892 from lrineau/Mesh_3-new_TBB_task_group_API-GF 
Mesh_3: now uses tbb:task_group instead of tbb::task (deprecated)
 2020-10-02 15:16:08 +02:00
Jane Tournois 8063d3cf6f replace deprecated std::not1 by std::not_fn 
std::not1 is deprecated in C++17 and removed from C++20

commit 5b474e0075 is similar
 2020-09-25 15:00:49 +02:00
Mael Rouxel-Labbé 4694a48913 Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-09-22 11:35:25 +02:00
Maxime Gimeno efc903d8dc Fix error 2020-09-10 10:22:09 +02:00
Maxime Gimeno aeda2ef58c Replace boolean name and prevent maxx_domain=0 2020-09-07 12:35:54 +02:00
Maxime Gimeno 98c80402bc Don't use cell info() 2020-09-04 12:27:32 +02:00
Maxime Gimeno 56af55ecd4 Fix bug in mesh_3 tests 2020-08-27 13:46:04 +02:00
Maxime Gimeno 39c0f96492 Fix domain 0 behaviour 2020-08-27 13:18:46 +02:00
Maxime Gimeno 9d1e849517 Allow the .mesh to be read even with null domains 2020-08-27 10:26:58 +02:00
Mael Rouxel-Labbé 8682f9bafb Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-08-24 11:45:17 +02:00
Dmitry Anisimov 263ad6bc99 fixed ch3, inter3, otr2, psp, pmp, smsp, mesh3 + cleanup 2020-08-20 18:25:01 +02:00
Sébastien Loriot 93d62b969c add forward declaration 
File_medit.h is included by Mesh_complex_3_in_triangulation_3_base.h
 2020-08-18 14:09:06 +02:00
Jane Tournois 1e42f4c9d4 rename IO functions for MEDIT format and a Triangulation_3 2020-08-18 11:16:58 +02:00
Jane Tournois 0a7d8cfd25 add an example with IO for a .mesh file 2020-08-18 10:42:20 +02:00
Maxime Gimeno 9c15f2c9dc Use FeatureSummary in the demo, and remove CGAL_FOUND 2020-08-04 12:46:17 +02:00
Laurent Rineau d311fca3ec Remove the deprecated use of approximate_number_of_enqueued_element 2020-08-03 14:42:44 +02:00
Laurent Rineau 4fc2f5938d Mesh_3 now uses tbb:task_group instead of tbb::task (deprecated) 2020-07-31 16:17:56 +02:00
Laurent Rineau dd383217f2 Avoid a race-condition between two tests using the same I/O file 2020-07-29 16:42:10 +02:00
Laurent Rineau 40a0a1bf49 Allow the use of Default as concurrency tag in Mesh_triangulation_3 
That is used in Tetrahedral_remeshing.
 2020-07-29 16:41:37 +02:00
Laurent Rineau 9a0f310e6b Fix IO of Mesh_vertex_3: case of dimension -1 
I forgot that dimension() can be -1, for far points. It has to be
dealt with in I/O.
 2020-07-29 16:40:48 +02:00
Laurent Rineau e293161a43 Merge pull request #4870 from lrineau/Mesh_3-fix_warning-GF 
Mesh_3: fix a warning
 2020-07-23 17:15:00 +02:00
Laurent Rineau 25eeff801b Fix a warning 
```
.../CGAL/Mesh_3/C3T3_helpers.h:1249:14: warning: ‘*((void*)& surface +4)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
 1249 |       return surface;
      |              ^~~~~~~
```
 2020-07-22 12:29:55 +02:00
Laurent Rineau 251074ad54 Use an API compatible with boost::optional and std::optional 2020-07-22 12:29:39 +02:00
Mael Rouxel-Labbé 3e9ce127b2 Misc CGAL IO doc fixes 2020-07-17 16:51:25 +02:00
Mael Rouxel-Labbé 93f1cd99ca Merge remote-tracking branch 'cgal/master' into CGAL-Improve_NP_doc_presentation-GF 2020-07-16 09:53:31 +02:00
Mael Rouxel-Labbé b6790c6bc6 Require only ostream instead of ofstream 2020-07-13 16:56:10 +02:00
Laurent Rineau 95687acb0f Merge branch 'Mesh_3-fix_examples_CMakeLists_with_TBB-GF' into Mesh_3-fix_examples_CMakeLists_with_TBB-GF--for_master 2020-07-09 13:58:41 +02:00
Laurent Rineau 9bf27c6763 Fix the link with TBB 2020-07-09 13:24:08 +02:00
Laurent Rineau ae40fec6a3 Missing target 2020-07-09 13:23:55 +02:00
Laurent Rineau 49f2d04d68 Sort target names 2020-07-09 13:22:37 +02:00
Laurent Rineau 72d280fdd9 Merge pull request #4803 from janetournois/Tet_remeshing-from_c3t3_input-jtournois 
Tetrahedral remeshing from C3T3
 2020-07-08 16:24:42 +02:00
Laurent Rineau 2e912d4cb2 Merge branch 'master' into Mesh_3-ITT_support-GF 2020-07-08 16:22:58 +02:00
Laurent Rineau 72b0f36790 Remove the task "Mesher_3::refine_mesh" (useless) 2020-07-08 15:47:56 +02:00
Laurent Rineau bc4fffebc0 ITT for CGAL_MESH_3_VERBOSE as well 2020-07-08 15:47:38 +02:00
Jane Tournois 612d6772b9 operator* between enum and floating type is deprecated, fix warning 2020-07-07 11:13:16 +02:00
Jane Tournois 5b474e0075 replace deprecated std::not1 by std::not_fn 
std::not1 is deprecated in C++17 and removed from C++20

+ add a C++17 macro in config.h
 2020-07-07 10:49:58 +02:00
Laurent Rineau 4d1d4e51eb Merge pull request #4809 from lrineau/Mesh_3-move_semantic_for_c3t3-GF 
Add move-semantic for c3t3, and a test
 2020-07-03 16:21:27 +02:00
Jane Tournois 2a4b4a2a10 set the Surface_patch_index also in the infinite cell 
otherwise facet and its mirror don't have the same patch index
 2020-07-03 07:35:20 +02:00
Laurent Rineau 36fd23d27c Fix the move-constructor: `far_vertices_` was forgot 2020-07-02 16:50:38 +02:00
Jane Tournois 460b1f29a6 Merge branch 'master' into Tet_remeshing-from_c3t3_input-jtournois 
# Conflicts:
#	Tetrahedral_remeshing/include/CGAL/Tetrahedral_remeshing/internal/tetrahedral_adaptive_remeshing_impl.h
 2020-07-01 08:01:05 +02:00
Laurent Rineau 07eacf5231 Merge pull request #4795 from janetournois/Mesh_3-fix_optimisers_parallel-jtournois 
Mesh_3 - fix parallel optimisers
 2020-06-30 16:38:05 +02:00
Jane Tournois 40668a297e fix protection of parallel code 2020-06-29 07:07:13 +02:00
Mael Rouxel-Labbé ae4c2aaa9e IO doc fixes 2020-06-26 16:08:02 +02:00
Jane Tournois 7740686d78 remove trailing whitespace 2020-06-26 15:54:17 +02:00
Jane Tournois 2a3dba9156 make build_triangulation() more generic with Surface_patch_index instead of int 
this is necessary to be able to remesh a C3t3 with a Surface_patch_index that
is not convertible to `int`
It is the case with meshes generated from images, which often use
std::pair<Subdomain_index, Subdomain_index>
 2020-06-26 15:53:02 +02:00
Jane Tournois 615ac14086 protect incident_cells_threadsafe with macro 
Periodic_3_mesh_3 does not have an implementation of these functions
because it does not have a parallel implementation
 2020-06-26 15:51:15 +02:00
Mael Rouxel-Labbé 50e3a838f3 Compilation fixes 2020-06-25 18:20:52 +02:00
Laurent Rineau 3895932005 Fix the TDS: restore the concurrency tag 2020-06-25 16:56:37 +02:00
Mael Rouxel-Labbé 26355e2e32 Uniformize capital / third person usage of \brief 2020-06-25 15:13:47 +02:00
Laurent Rineau 5572d9dba8 Add move-semantic for c3t3, and a test 2020-06-24 10:59:19 +02:00
Mael Rouxel-Labbé 26ae0d2b8c Misc compilation fixes 2020-06-23 19:11:55 +02:00
Laurent Rineau 92ca24d013 Merge pull request #4783 from maxGimeno/CGAL-Fixes_after_beta1-maxGimeno 
Some Fixes after beta1
 2020-06-23 18:50:00 +02:00
Laurent Rineau bd7d3c498f Merge pull request #4786 from lrineau/Mesh_3-fix_compilation_error_MSVC2015-GF 
Continue workaround for MSVC2015
 2020-06-23 18:49:58 +02:00
Maxime Gimeno f221f4ba4a Try to add CGAL::CGAL_Image_IO to the linked target to fix LINK error on MSVC 2019 2020-06-19 15:53:50 +02:00
Jane Tournois d4b7af22ba use tr_.try_lock_and_get_incident_cells() 
and remove a "todo" of CJ
 2020-06-19 13:31:52 +02:00
Jane Tournois 7cd18cd659 unlock after the move, even if there is no topological change 
to avoid making changes with another thread
 2020-06-19 13:31:50 +02:00
Jane Tournois c6a922c9dc fix Facet_updater parallel 
`vertex_to_proj` was not locked and this was causing seg faults
 2020-06-19 13:31:49 +02:00
Mael Rouxel-Labbé 6f8a895671 Merge remote-tracking branch 'mine/CGAL-Improve_NP_doc_presentation-GF' into CGAL_IO-maxGimeno 2020-06-18 15:21:27 +02:00
Mael Rouxel-Labbé 26eb7903aa Merge remote-tracking branch 'cgal/master' into CGAL-Improve_NP_doc_presentation-GF 2020-06-18 12:46:46 +02:00
Maxime Gimeno ea53a8d70d Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-06-17 14:25:21 +02:00
Laurent Rineau e44d58a49c Fix a bug in this PR 
The number of type in `Indices_tuple` and `Index` may differ: one is a
list of types, and the other one is more like a set of types.
 2020-06-17 10:22:51 +02:00
Laurent Rineau 86496e469e Repair the I/O of Mesh_vertex_3 2020-06-16 21:56:07 +02:00
Laurent Rineau b64a1718c4 Reduce size of symbols (and debug infos) 
- one nested struct `Tds` in `Mesh_triangulation_3`,
- rework of `Mesh_vertex_base_3` and `Compact_mesh_cell_base_3`.

That reduction of debug infos and size of symbols will help the IDE
and debuggers.

```
Debug info size (with gcc-9, and `-g`)

ORIG	AFTER	RATIO  		FILE IN examples/Mesh_3/
56532	55572	1.01727		mesh_3D_image_with_custom_initialization.debug
64696	63420	1.02012		mesh_cubes_intersection_with_features.debug
56700	55536	1.02096		mesh_3D_image.debug
56488	55324	1.02104		mesh_implicit_sphere.debug
56496	55332	1.02104		mesh_implicit_sphere_variable_size.debug
56776	55604	1.02108		mesh_3D_image_variable_size.debug
56520	55296	1.02214		mesh_cubes_intersection.debug
56684	55428	1.02266		mesh_3D_gray_image.debug
56796	55536	1.02269		mesh_3D_gray_image_multiple_values.debug
56732	55472	1.02271		mesh_3D_gray_vtk_image.debug
57128	55824	1.02336		mesh_optimization_example.debug
57420	56088	1.02375		mesh_optimization_lloyd_example.debug
56948	55560	1.02498		mesh_implicit_domains_2.debug
56932	55544	1.02499		mesh_implicit_domains.debug
69160	63304	1.09251		mesh_hybrid_mesh_domain.debug
72212	66088	1.09266		mesh_3D_image_with_features.debug
70172	63924	1.09774		mesh_two_implicit_spheres_with_balls.debug
75388	66128	1.14003		mesh_polyhedral_domain_sm.debug
75676	64412	1.17487		mesh_polyhedral_complex_sm.debug
81544	67772	1.20321		mesh_polyhedral_domain.debug
87456	71672	1.22023		mesh_polyhedral_domain_with_features_sm.debug
87524	71600	1.2224		remesh_polyhedral_surface_sm.debug
92332	74528	1.23889		mesh_polyhedral_complex.debug
98640	77448	1.27363		mesh_polyhedral_domain_with_lipschitz_sizing.debug
95640	74456	1.28452		mesh_polyhedral_domain_with_features.debug
95132	74000	1.28557		mesh_polyhedral_domain_with_surface_inside.debug
95724	74388	1.28682		remesh_polyhedral_surface.debug

1899448	1695256	1.12045		total
```
 2020-06-16 17:47:00 +02:00
Laurent Rineau 113c3d1d6f Continue woraround for MSVC2015 
That is a followup to commit 5fbaaa9e42
from PR #4468.

I also chose a better name `is_null` instead of
`compare_weighted_circumcenter`.
 2020-06-15 15:56:28 +02:00
Maxime Gimeno 49e66c4ddf Add missing target 2020-06-15 13:08:28 +02:00
Laurent Rineau d263a63925 Refresh examples/Mesh_3/CMakeLists.txt 
... and remove the use of the variable `WITH_CGAL_ImageIO`.
 2020-06-12 20:43:42 +02:00
Laurent Rineau 25710329ac Add ITT support in Mesh_3 2020-06-11 14:56:04 +02:00
Laurent Rineau 9b8ecd720b Merge pull request #4636 from sgiraudot/CMake-Third_party_imported_targets-GF 
CMake: Use Imported Targets for 3rd Party Libs
 2020-06-05 17:54:14 +02:00
Mael Rouxel-Labbé 071565467d Merge remote-tracking branch 'cgal/master' into CGAL-Improve_NP_doc_presentation-GF 2020-06-03 19:01:46 +02:00
Laurent Rineau 871c97273a Merge pull request #4496 from lrineau/CGAL-move_semantic_for_triangulations-GF 
Add move-semantic to Compact_container and Triangulations
 2020-06-03 16:23:22 +02:00
Laurent Rineau a828cb0d06 Merge pull request #4620 from janetournois/Tetrahedral_remeshing-new-jtournois 
Tetrahedral remeshing - new package
 2020-06-03 16:23:17 +02:00
Simon Giraudot 89285f1feb Merge remote-tracking branch 'mine/CMake-Third_party_imported_targets-GF' into CMake-Third_party_imported_targets-GF 2020-05-28 08:53:17 +02:00
Sébastien Loriot 4dda7b6c80 update license of c3t3 related files 
a proper package must be created in a later release
 2020-05-27 15:53:05 +02:00
Mael Rouxel-Labbé 580a1efd5c Remove trailing whitespace / tabs 2020-05-22 15:31:50 +02:00
Mael Rouxel-Labbé fb8463f470 Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-05-22 15:17:56 +02:00
Laurent Rineau dcc4fb1cc1 Merge remote-tracking branch 'cgal/master' into CGAL-move_semantic_for_triangulations-GF 
# Conflicts:
#	STL_Extension/include/CGAL/Compact_container.h
 2020-05-20 09:46:26 +02:00
Sébastien Loriot 7c4586be1b Merge remote-tracking branch 'cgal/releases/CGAL-5.0-branch' 2020-05-12 16:59:02 +02:00
Sébastien Loriot fb83386f44 Merge remote-tracking branch 'cgal/releases/CGAL-4.14-branch' 2020-05-12 16:58:32 +02:00
Mael Rouxel-Labbé 038869cab9 Merge remote-tracking branch 'cgal/master' into CGAL-Improve_NP_doc_presentation-GF 2020-05-12 15:12:21 +02:00
Jane Tournois 94d98ed0dc c3t3 cell info in the .mesh file is subdomain_index() 
the recent internal changes in build_triangulation() use subdomain_index(),
which is part of the concept MeshCellBase_3
 2020-05-11 06:48:25 +02:00
Jane Tournois 9d194e3814 add missing includes 2020-05-06 15:18:57 +02:00
Jane Tournois 28a9cb150a replace std::set<Vertex_handle> with std::array<Vertex_handle> 
for facets vertices
this should be a lot more efficient
 2020-05-06 15:11:06 +02:00
Laurent Rineau 3951c38637 Fix UBSAN error: do not bind reference to null pointer 
Equivalent to #4683
 2020-05-04 18:54:19 +02:00
Jane Tournois 8ec09f40fc remove dependency on Skin_surface_3 
by replacing Triangulation_incremental_builder_3 by
build_triangulation() from tet_soup_to_c3t3.h
(which is part of Mesh_3 as C3T3)
 2020-05-04 16:09:27 +02:00
Maxime Gimeno 049439fa6b Merge remote-tracking branch 'cgal/master' into CGAL_IO-maxGimeno 2020-04-30 16:47:58 +02:00
Jane Tournois 977185466a fix .mesh reader 
- fix order of vertices depending on parity of i
- add infinite facets to incident cells map before assigning neighbors
 2020-04-22 09:34:46 +02:00
Laurent Rineau fe1f731e22 Fix timestamps 2020-04-21 17:08:57 +02:00
Maxime Gimeno 5b2d46cfa0 Fixes for min/max 2020-04-21 12:04:45 +02:00